test_transform.py 104 KB
Newer Older
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
##
#   Copyright 2019-2021 Contributors
#
#   Licensed under the Apache License, Version 2.0 (the "License");
#   you may not use this file except in compliance with the License.
#   You may obtain a copy of the License at
#
#       http://www.apache.org/licenses/LICENSE-2.0
#
#   Unless required by applicable law or agreed to in writing, software
#   distributed under the License is distributed on an "AS IS" BASIS,
#   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#   See the License for the specific language governing permissions and
#   limitations under the License.
#

17
from scipy import sparse as spsp
18
19
import networkx as nx
import numpy as np
20
import os
21
22
import dgl
import dgl.function as fn
23
import dgl.partition
24
import backend as F
25
import unittest
26
import math
27
28
import pytest
from test_utils.graph_cases import get_cases
nv-dlasalle's avatar
nv-dlasalle committed
29
from test_utils import parametrize_idtype
30

31
from test_heterograph import create_test_heterograph3, create_test_heterograph4, create_test_heterograph5
32

33
34
35
D = 5

# line graph related
36

37
def test_line_graph1():
38
    N = 5
39
    G = dgl.DGLGraph(nx.star_graph(N)).to(F.ctx())
40
    G.edata['h'] = F.randn((2 * N, D))
41
42
    L = G.line_graph(shared=True)
    assert L.number_of_nodes() == 2 * N
43
    assert F.allclose(L.ndata['h'], G.edata['h'])
44
    assert G.device == F.ctx()
45

nv-dlasalle's avatar
nv-dlasalle committed
46
@parametrize_idtype
47
def test_line_graph2(idtype):
48
49
50
    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1, 1, 2, 2],[2, 0, 2, 0, 1])
    }, idtype=idtype)
51
    lg = dgl.line_graph(g)
52
53
54
55
56
57
58
59
    assert lg.number_of_nodes() == 5
    assert lg.number_of_edges() == 8
    row, col = lg.edges()
    assert np.array_equal(F.asnumpy(row),
                          np.array([0, 0, 1, 2, 2, 3, 4, 4]))
    assert np.array_equal(F.asnumpy(col),
                          np.array([3, 4, 0, 3, 4, 0, 1, 2]))

60
    lg = dgl.line_graph(g, backtracking=False)
61
62
63
64
65
66
67
    assert lg.number_of_nodes() == 5
    assert lg.number_of_edges() == 4
    row, col = lg.edges()
    assert np.array_equal(F.asnumpy(row),
                          np.array([0, 1, 2, 4]))
    assert np.array_equal(F.asnumpy(col),
                          np.array([4, 0, 3, 1]))
68
69
70
    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1, 1, 2, 2],[2, 0, 2, 0, 1])
    }, idtype=idtype).formats('csr')
71
    lg = dgl.line_graph(g)
72
73
74
75
76
77
78
79
    assert lg.number_of_nodes() == 5
    assert lg.number_of_edges() == 8
    row, col = lg.edges()
    assert np.array_equal(F.asnumpy(row),
                          np.array([0, 0, 1, 2, 2, 3, 4, 4]))
    assert np.array_equal(F.asnumpy(col),
                          np.array([3, 4, 0, 3, 4, 0, 1, 2]))

80
81
82
    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1, 1, 2, 2],[2, 0, 2, 0, 1])
    }, idtype=idtype).formats('csc')
83
    lg = dgl.line_graph(g)
84
85
86
87
88
89
90
91
92
93
94
    assert lg.number_of_nodes() == 5
    assert lg.number_of_edges() == 8
    row, col, eid = lg.edges('all')
    row = F.asnumpy(row)
    col = F.asnumpy(col)
    eid = F.asnumpy(eid).astype(int)
    order = np.argsort(eid)
    assert np.array_equal(row[order],
                          np.array([0, 0, 1, 2, 2, 3, 4, 4]))
    assert np.array_equal(col[order],
                          np.array([3, 4, 0, 3, 4, 0, 1, 2]))
95

96
97
98
99
100
101
102
103
104
105
106
107
def test_no_backtracking():
    N = 5
    G = dgl.DGLGraph(nx.star_graph(N))
    L = G.line_graph(backtracking=False)
    assert L.number_of_nodes() == 2 * N
    for i in range(1, N):
        e1 = G.edge_id(0, i)
        e2 = G.edge_id(i, 0)
        assert not L.has_edge_between(e1, e2)
        assert not L.has_edge_between(e2, e1)

# reverse graph related
nv-dlasalle's avatar
nv-dlasalle committed
108
@parametrize_idtype
109
def test_reverse(idtype):
110
    g = dgl.DGLGraph()
111
    g = g.astype(idtype).to(F.ctx())
112
113
114
    g.add_nodes(5)
    # The graph need not to be completely connected.
    g.add_edges([0, 1, 2], [1, 2, 1])
115
116
    g.ndata['h'] = F.tensor([[0.], [1.], [2.], [3.], [4.]])
    g.edata['h'] = F.tensor([[5.], [6.], [7.]])
117
118
119
120
121
122
    rg = g.reverse()

    assert g.is_multigraph == rg.is_multigraph

    assert g.number_of_nodes() == rg.number_of_nodes()
    assert g.number_of_edges() == rg.number_of_edges()
123
124
    assert F.allclose(F.astype(rg.has_edges_between(
        [1, 2, 1], [0, 1, 2]), F.float32), F.ones((3,)))
125
126
127
128
    assert g.edge_id(0, 1) == rg.edge_id(1, 0)
    assert g.edge_id(1, 2) == rg.edge_id(2, 1)
    assert g.edge_id(2, 1) == rg.edge_id(1, 2)

129
    # test dgl.reverse
130
131
132
133
    # test homogeneous graph
    g = dgl.graph((F.tensor([0, 1, 2]), F.tensor([1, 2, 0])))
    g.ndata['h'] = F.tensor([[0.], [1.], [2.]])
    g.edata['h'] = F.tensor([[3.], [4.], [5.]])
134
    g_r = dgl.reverse(g)
135
136
137
138
139
140
141
142
143
144
145
    assert g.number_of_nodes() == g_r.number_of_nodes()
    assert g.number_of_edges() == g_r.number_of_edges()
    u_g, v_g, eids_g = g.all_edges(form='all')
    u_rg, v_rg, eids_rg = g_r.all_edges(form='all')
    assert F.array_equal(u_g, v_rg)
    assert F.array_equal(v_g, u_rg)
    assert F.array_equal(eids_g, eids_rg)
    assert F.array_equal(g.ndata['h'], g_r.ndata['h'])
    assert len(g_r.edata) == 0

    # without share ndata
146
    g_r = dgl.reverse(g, copy_ndata=False)
147
148
149
150
151
152
    assert g.number_of_nodes() == g_r.number_of_nodes()
    assert g.number_of_edges() == g_r.number_of_edges()
    assert len(g_r.ndata) == 0
    assert len(g_r.edata) == 0

    # with share ndata and edata
153
    g_r = dgl.reverse(g, copy_ndata=True, copy_edata=True)
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
    assert g.number_of_nodes() == g_r.number_of_nodes()
    assert g.number_of_edges() == g_r.number_of_edges()
    assert F.array_equal(g.ndata['h'], g_r.ndata['h'])
    assert F.array_equal(g.edata['h'], g_r.edata['h'])

    # add new node feature to g_r
    g_r.ndata['hh'] = F.tensor([0, 1, 2])
    assert ('hh' in g.ndata) is False
    assert ('hh' in g_r.ndata) is True

    # add new edge feature to g_r
    g_r.edata['hh'] = F.tensor([0, 1, 2])
    assert ('hh' in g.edata) is False
    assert ('hh' in g_r.edata) is True

    # test heterogeneous graph
    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1, 2, 4, 3 ,1, 3], [1, 2, 3, 2, 0, 0, 1]),
        ('user', 'plays', 'game'): ([0, 0, 2, 3, 3, 4, 1], [1, 0, 1, 0, 1, 0, 0]),
173
174
        ('developer', 'develops', 'game'): ([0, 1, 1, 2], [0, 0, 1, 1])},
        idtype=idtype, device=F.ctx())
175
176
177
178
179
    g.nodes['user'].data['h'] = F.tensor([0, 1, 2, 3, 4])
    g.nodes['user'].data['hh'] = F.tensor([1, 1, 1, 1, 1])
    g.nodes['game'].data['h'] = F.tensor([0, 1])
    g.edges['follows'].data['h'] = F.tensor([0, 1, 2, 4, 3 ,1, 3])
    g.edges['follows'].data['hh'] = F.tensor([1, 2, 3, 2, 0, 0, 1])
180
    g_r = dgl.reverse(g)
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209

    for etype_g, etype_gr in zip(g.canonical_etypes, g_r.canonical_etypes):
        assert etype_g[0] == etype_gr[2]
        assert etype_g[1] == etype_gr[1]
        assert etype_g[2] == etype_gr[0]
        assert g.number_of_edges(etype_g) == g_r.number_of_edges(etype_gr)
    for ntype in g.ntypes:
        assert g.number_of_nodes(ntype) == g_r.number_of_nodes(ntype)
    assert F.array_equal(g.nodes['user'].data['h'], g_r.nodes['user'].data['h'])
    assert F.array_equal(g.nodes['user'].data['hh'], g_r.nodes['user'].data['hh'])
    assert F.array_equal(g.nodes['game'].data['h'], g_r.nodes['game'].data['h'])
    assert len(g_r.edges['follows'].data) == 0
    u_g, v_g, eids_g = g.all_edges(form='all', etype=('user', 'follows', 'user'))
    u_rg, v_rg, eids_rg = g_r.all_edges(form='all', etype=('user', 'follows', 'user'))
    assert F.array_equal(u_g, v_rg)
    assert F.array_equal(v_g, u_rg)
    assert F.array_equal(eids_g, eids_rg)
    u_g, v_g, eids_g = g.all_edges(form='all', etype=('user', 'plays', 'game'))
    u_rg, v_rg, eids_rg = g_r.all_edges(form='all', etype=('game', 'plays', 'user'))
    assert F.array_equal(u_g, v_rg)
    assert F.array_equal(v_g, u_rg)
    assert F.array_equal(eids_g, eids_rg)
    u_g, v_g, eids_g = g.all_edges(form='all', etype=('developer', 'develops', 'game'))
    u_rg, v_rg, eids_rg = g_r.all_edges(form='all', etype=('game', 'develops', 'developer'))
    assert F.array_equal(u_g, v_rg)
    assert F.array_equal(v_g, u_rg)
    assert F.array_equal(eids_g, eids_rg)

    # withour share ndata
210
    g_r = dgl.reverse(g, copy_ndata=False)
211
212
213
214
215
216
217
218
219
220
    for etype_g, etype_gr in zip(g.canonical_etypes, g_r.canonical_etypes):
        assert etype_g[0] == etype_gr[2]
        assert etype_g[1] == etype_gr[1]
        assert etype_g[2] == etype_gr[0]
        assert g.number_of_edges(etype_g) == g_r.number_of_edges(etype_gr)
    for ntype in g.ntypes:
        assert g.number_of_nodes(ntype) == g_r.number_of_nodes(ntype)
    assert len(g_r.nodes['user'].data) == 0
    assert len(g_r.nodes['game'].data) == 0

221
    g_r = dgl.reverse(g, copy_ndata=True, copy_edata=True)
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
    print(g_r)
    for etype_g, etype_gr in zip(g.canonical_etypes, g_r.canonical_etypes):
        assert etype_g[0] == etype_gr[2]
        assert etype_g[1] == etype_gr[1]
        assert etype_g[2] == etype_gr[0]
        assert g.number_of_edges(etype_g) == g_r.number_of_edges(etype_gr)
    assert F.array_equal(g.edges['follows'].data['h'], g_r.edges['follows'].data['h'])
    assert F.array_equal(g.edges['follows'].data['hh'], g_r.edges['follows'].data['hh'])

    # add new node feature to g_r
    g_r.nodes['user'].data['hhh'] = F.tensor([0, 1, 2, 3, 4])
    assert ('hhh' in g.nodes['user'].data) is False
    assert ('hhh' in g_r.nodes['user'].data) is True

    # add new edge feature to g_r
    g_r.edges['follows'].data['hhh'] = F.tensor([1, 2, 3, 2, 0, 0, 1])
    assert ('hhh' in g.edges['follows'].data) is False
    assert ('hhh' in g_r.edges['follows'].data) is True

241

nv-dlasalle's avatar
nv-dlasalle committed
242
@parametrize_idtype
243
def test_reverse_shared_frames(idtype):
244
    g = dgl.DGLGraph()
245
    g = g.astype(idtype).to(F.ctx())
246
247
    g.add_nodes(3)
    g.add_edges([0, 1, 2], [1, 2, 1])
248
249
    g.ndata['h'] = F.tensor([[0.], [1.], [2.]])
    g.edata['h'] = F.tensor([[3.], [4.], [5.]])
250
251

    rg = g.reverse(share_ndata=True, share_edata=True)
252
253
254
    assert F.allclose(g.ndata['h'], rg.ndata['h'])
    assert F.allclose(g.edata['h'], rg.edata['h'])
    assert F.allclose(g.edges[[0, 2], [1, 1]].data['h'],
255
256
                      rg.edges[[1, 1], [0, 2]].data['h'])

257
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
258
def test_to_bidirected():
259
260
    # homogeneous graph
    elist = [(0, 0), (0, 1), (1, 0),
261
             (1, 1), (2, 1), (2, 2)]
262
    num_edges = 7
263
    g = dgl.graph(tuple(zip(*elist)))
264
265
266
267
268
269
270
271
272
273
274
275
276
    elist.append((1, 2))
    elist = set(elist)
    big = dgl.to_bidirected(g)
    assert big.number_of_edges() == num_edges
    src, dst = big.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == set(elist)

    # heterogeneous graph
    elist1 = [(0, 0), (0, 1), (1, 0),
                (1, 1), (2, 1), (2, 2)]
    elist2 = [(0, 0), (0, 1)]
    g = dgl.heterograph({
277
278
        ('user', 'wins', 'user'): tuple(zip(*elist1)),
        ('user', 'follows', 'user'): tuple(zip(*elist2))
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
    })
    g.nodes['user'].data['h'] = F.ones((3, 1))
    elist1.append((1, 2))
    elist1 = set(elist1)
    elist2.append((1, 0))
    elist2 = set(elist2)
    big = dgl.to_bidirected(g)
    assert big.number_of_edges('wins') == 7
    assert big.number_of_edges('follows') == 3
    src, dst = big.edges(etype='wins')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == set(elist1)
    src, dst = big.edges(etype='follows')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == set(elist2)

    big = dgl.to_bidirected(g, copy_ndata=True)
    assert F.array_equal(g.nodes['user'].data['h'], big.nodes['user'].data['h'])

def test_add_reverse_edges():
299
300
301
302
    # homogeneous graph
    g = dgl.graph((F.tensor([0, 1, 3, 1]), F.tensor([1, 2, 0, 2])))
    g.ndata['h'] = F.tensor([[0.], [1.], [2.], [1.]])
    g.edata['h'] = F.tensor([[3.], [4.], [5.], [6.]])
303
    bg = dgl.add_reverse_edges(g, copy_ndata=True, copy_edata=True)
304
305
306
307
308
309
310
311
312
313
314
315
    u, v = g.edges()
    ub, vb = bg.edges()
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    assert F.array_equal(g.ndata['h'], bg.ndata['h'])
    assert F.array_equal(F.cat([g.edata['h'], g.edata['h']], dim=0), bg.edata['h'])
    bg.ndata['hh'] = F.tensor([[0.], [1.], [2.], [1.]])
    assert ('hh' in g.ndata) is False
    bg.edata['hh'] = F.tensor([[0.], [1.], [2.], [1.], [0.], [1.], [2.], [1.]])
    assert ('hh' in g.edata) is False

    # donot share ndata and edata
316
    bg = dgl.add_reverse_edges(g, copy_ndata=False, copy_edata=False)
317
318
319
320
321
322
323
    ub, vb = bg.edges()
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    assert ('h' in bg.ndata) is False
    assert ('h' in bg.edata) is False

    # zero edge graph
324
    g = dgl.graph(([], []))
325
    bg = dgl.add_reverse_edges(g, copy_ndata=True, copy_edata=True, exclude_self=False)
326
327
328
329
330
331
332
333
334
335

    # heterogeneous graph
    g = dgl.heterograph({
        ('user', 'wins', 'user'): (F.tensor([0, 2, 0, 2, 2]), F.tensor([1, 1, 2, 1, 0])),
        ('user', 'plays', 'game'): (F.tensor([1, 2, 1]), F.tensor([2, 1, 1])),
        ('user', 'follows', 'user'): (F.tensor([1, 2, 1]), F.tensor([0, 0, 0]))
    })
    g.nodes['game'].data['hv'] = F.ones((3, 1))
    g.nodes['user'].data['hv'] = F.ones((3, 1))
    g.edges['wins'].data['h'] = F.tensor([0, 1, 2, 3, 4])
336
    bg = dgl.add_reverse_edges(g, copy_ndata=True, copy_edata=True, ignore_bipartite=True)
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
    assert F.array_equal(g.nodes['game'].data['hv'], bg.nodes['game'].data['hv'])
    assert F.array_equal(g.nodes['user'].data['hv'], bg.nodes['user'].data['hv'])
    u, v = g.all_edges(order='eid', etype=('user', 'wins', 'user'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'wins', 'user'))
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    assert F.array_equal(F.cat([g.edges['wins'].data['h'], g.edges['wins'].data['h']], dim=0),
                         bg.edges['wins'].data['h'])
    u, v = g.all_edges(order='eid', etype=('user', 'follows', 'user'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'follows', 'user'))
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    u, v = g.all_edges(order='eid', etype=('user', 'plays', 'game'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'plays', 'game'))
    assert F.array_equal(u, ub)
    assert F.array_equal(v, vb)
353
354
    assert set(bg.edges['plays'].data.keys()) == {dgl.EID}
    assert set(bg.edges['follows'].data.keys()) == {dgl.EID}
355
356

    # donot share ndata and edata
357
    bg = dgl.add_reverse_edges(g, copy_ndata=False, copy_edata=False, ignore_bipartite=True)
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
    assert len(bg.edges['wins'].data) == 0
    assert len(bg.edges['plays'].data) == 0
    assert len(bg.edges['follows'].data) == 0
    assert len(bg.nodes['game'].data) == 0
    assert len(bg.nodes['user'].data) == 0
    u, v = g.all_edges(order='eid', etype=('user', 'wins', 'user'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'wins', 'user'))
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    u, v = g.all_edges(order='eid', etype=('user', 'follows', 'user'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'follows', 'user'))
    assert F.array_equal(F.cat([u, v], dim=0), ub)
    assert F.array_equal(F.cat([v, u], dim=0), vb)
    u, v = g.all_edges(order='eid', etype=('user', 'plays', 'game'))
    ub, vb = bg.all_edges(order='eid', etype=('user', 'plays', 'game'))
    assert F.array_equal(u, ub)
    assert F.array_equal(v, vb)

376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
    # test the case when some nodes have zero degree
    # homogeneous graph
    g = dgl.graph((F.tensor([0, 1, 3, 1]), F.tensor([1, 2, 0, 2])), num_nodes=6)
    g.ndata['h'] = F.tensor([[0.], [1.], [2.], [1.], [1.], [1.]])
    g.edata['h'] = F.tensor([[3.], [4.], [5.], [6.]])
    bg = dgl.add_reverse_edges(g, copy_ndata=True, copy_edata=True)
    assert g.number_of_nodes() == bg.number_of_nodes()
    assert F.array_equal(g.ndata['h'], bg.ndata['h'])
    assert F.array_equal(F.cat([g.edata['h'], g.edata['h']], dim=0), bg.edata['h'])

    # heterogeneous graph
    g = dgl.heterograph({
        ('user', 'wins', 'user'): (F.tensor([0, 2, 0, 2, 2]), F.tensor([1, 1, 2, 1, 0])),
        ('user', 'plays', 'game'): (F.tensor([1, 2, 1]), F.tensor([2, 1, 1])),
        ('user', 'follows', 'user'): (F.tensor([1, 2, 1]), F.tensor([0, 0, 0]))},
        num_nodes_dict={
            'user': 5,
            'game': 3
        })
    g.nodes['game'].data['hv'] = F.ones((3, 1))
    g.nodes['user'].data['hv'] = F.ones((5, 1))
    g.edges['wins'].data['h'] = F.tensor([0, 1, 2, 3, 4])
    bg = dgl.add_reverse_edges(g, copy_ndata=True, copy_edata=True, ignore_bipartite=True)
    assert g.number_of_nodes('user') == bg.number_of_nodes('user')
    assert g.number_of_nodes('game') == bg.number_of_nodes('game')
    assert F.array_equal(g.nodes['game'].data['hv'], bg.nodes['game'].data['hv'])
    assert F.array_equal(g.nodes['user'].data['hv'], bg.nodes['user'].data['hv'])
    assert F.array_equal(F.cat([g.edges['wins'].data['h'], g.edges['wins'].data['h']], dim=0),
                         bg.edges['wins'].data['h'])

406
407
408
409
410
411
412
413
414
415
    # test exclude_self
    g = dgl.heterograph({
        ('A', 'r1', 'A'): (F.tensor([0, 0, 1, 1]), F.tensor([0, 1, 1, 2])),
        ('A', 'r2', 'A'): (F.tensor([0, 1]), F.tensor([1, 2]))
    })
    g.edges['r1'].data['h'] = F.tensor([0, 1, 2, 3])
    rg = dgl.add_reverse_edges(g, copy_edata=True, exclude_self=True)
    assert rg.num_edges('r1') == 6
    assert rg.num_edges('r2') == 4
    assert F.array_equal(rg.edges['r1'].data['h'], F.tensor([0, 1, 2, 3, 1, 3]))
416

417
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
418
419
420
421
422
423
424
425
426
427
def test_simple_graph():
    elist = [(0, 1), (0, 2), (1, 2), (0, 1)]
    g = dgl.DGLGraph(elist, readonly=True)
    assert g.is_multigraph
    sg = dgl.to_simple_graph(g)
    assert not sg.is_multigraph
    assert sg.number_of_edges() == 3
    src, dst = sg.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == set(elist)
428

429
430
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
def _test_bidirected_graph():
431
    def _test(in_readonly, out_readonly):
432
433
434
        elist = [(0, 0), (0, 1), (1, 0),
                (1, 1), (2, 1), (2, 2)]
        num_edges = 7
435
436
437
        g = dgl.DGLGraph(elist, readonly=in_readonly)
        elist.append((1, 2))
        elist = set(elist)
438
        big = dgl.to_bidirected_stale(g, out_readonly)
439
        assert big.number_of_edges() == num_edges
440
441
442
443
444
445
446
447
448
        src, dst = big.edges()
        eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
        assert eset == set(elist)

    _test(True, True)
    _test(True, False)
    _test(False, True)
    _test(False, False)

449

450
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
451
452
453
454
def test_khop_graph():
    N = 20
    feat = F.randn((N, 5))

Mufei Li's avatar
Mufei Li committed
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
    def _test(g):
        for k in range(4):
            g_k = dgl.khop_graph(g, k)
            # use original graph to do message passing for k times.
            g.ndata['h'] = feat
            for _ in range(k):
                g.update_all(fn.copy_u('h', 'm'), fn.sum('m', 'h'))
            h_0 = g.ndata.pop('h')
            # use k-hop graph to do message passing for one time.
            g_k.ndata['h'] = feat
            g_k.update_all(fn.copy_u('h', 'm'), fn.sum('m', 'h'))
            h_1 = g_k.ndata.pop('h')
            assert F.allclose(h_0, h_1, rtol=1e-3, atol=1e-3)

    # Test for random undirected graphs
    g = dgl.DGLGraph(nx.erdos_renyi_graph(N, 0.3))
    _test(g)
    # Test for random directed graphs
    g = dgl.DGLGraph(nx.erdos_renyi_graph(N, 0.3, directed=True))
    _test(g)
475

476
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
477
478
479
480
481
def test_khop_adj():
    N = 20
    feat = F.randn((N, 5))
    g = dgl.DGLGraph(nx.erdos_renyi_graph(N, 0.3))
    for k in range(3):
482
        adj = F.tensor(F.swapaxes(dgl.khop_adj(g, k), 0, 1))
483
484
485
486
487
488
489
490
491
        # use original graph to do message passing for k times.
        g.ndata['h'] = feat
        for _ in range(k):
            g.update_all(fn.copy_u('h', 'm'), fn.sum('m', 'h'))
        h_0 = g.ndata.pop('h')
        # use k-hop adj to do message passing for one time.
        h_1 = F.matmul(adj, feat)
        assert F.allclose(h_0, h_1, rtol=1e-3, atol=1e-3)

492

493
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
494
495
496
497
498
499
500
def test_laplacian_lambda_max():
    N = 20
    eps = 1e-6
    # test DGLGraph
    g = dgl.DGLGraph(nx.erdos_renyi_graph(N, 0.3))
    l_max = dgl.laplacian_lambda_max(g)
    assert (l_max[0] < 2 + eps)
Zihao Ye's avatar
Zihao Ye committed
501
    # test batched DGLGraph
502
    '''
503
504
505
506
507
508
509
510
511
    N_arr = [20, 30, 10, 12]
    bg = dgl.batch([
        dgl.DGLGraph(nx.erdos_renyi_graph(N, 0.3))
        for N in N_arr
    ])
    l_max_arr = dgl.laplacian_lambda_max(bg)
    assert len(l_max_arr) == len(N_arr)
    for l_max in l_max_arr:
        assert l_max < 2 + eps
512
    '''
513

514
def create_large_graph(num_nodes, idtype=F.int64):
515
516
517
    row = np.random.choice(num_nodes, num_nodes * 10)
    col = np.random.choice(num_nodes, num_nodes * 10)
    spm = spsp.coo_matrix((np.ones(len(row)), (row, col)))
518
    spm.sum_duplicates()
519

520
    return dgl.from_scipy(spm, idtype=idtype)
521
522
523
524
525
526
527
528
529

def get_nodeflow(g, node_ids, num_layers):
    batch_size = len(node_ids)
    expand_factor = g.number_of_nodes()
    sampler = dgl.contrib.sampling.NeighborSampler(g, batch_size,
            expand_factor=expand_factor, num_hops=num_layers,
            seed_nodes=node_ids)
    return next(iter(sampler))

530
# Disabled since everything will be on heterogeneous graphs
531
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
532
def test_partition_with_halo():
533
    g = create_large_graph(1000)
534
    node_part = np.random.choice(4, g.number_of_nodes())
535
    subgs, _, _ = dgl.transforms.partition_graph_with_halo(g, node_part, 2, reshuffle=True)
536
537
538
    for part_id, subg in subgs.items():
        node_ids = np.nonzero(node_part == part_id)[0]
        lnode_ids = np.nonzero(F.asnumpy(subg.ndata['inner_node']))[0]
539
540
541
542
        orig_nids = F.asnumpy(subg.ndata['orig_id'])[lnode_ids]
        assert np.all(np.sort(orig_nids) == node_ids)
        assert np.all(F.asnumpy(subg.in_degrees(lnode_ids)) == F.asnumpy(g.in_degrees(orig_nids)))
        assert np.all(F.asnumpy(subg.out_degrees(lnode_ids)) == F.asnumpy(g.out_degrees(orig_nids)))
543

544
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
545
@unittest.skipIf(F._default_context_str == 'gpu', reason="METIS doesn't support GPU")
nv-dlasalle's avatar
nv-dlasalle committed
546
@parametrize_idtype
547
def test_metis_partition(idtype):
Da Zheng's avatar
Da Zheng committed
548
    # TODO(zhengda) Metis fails to partition a small graph.
549
550
551
552
553
554
555
556
557
558
559
560
561
    g = create_large_graph(1000, idtype=idtype)
    if idtype == F.int64:
        check_metis_partition(g, 0)
        check_metis_partition(g, 1)
        check_metis_partition(g, 2)
        check_metis_partition_with_constraint(g)
    else:
        assert_fail = False
        try:
            check_metis_partition(g, 1)
        except:
            assert_fail = True
        assert assert_fail
562

563
564
565
566
def check_metis_partition_with_constraint(g):
    ntypes = np.zeros((g.number_of_nodes(),), dtype=np.int32)
    ntypes[0:int(g.number_of_nodes()/4)] = 1
    ntypes[int(g.number_of_nodes()*3/4):] = 2
567
    subgs = dgl.transforms.metis_partition(g, 4, extra_cached_hops=1, balance_ntypes=ntypes)
568
569
570
571
572
573
574
575
    if subgs is not None:
        for i in subgs:
            subg = subgs[i]
            parent_nids = F.asnumpy(subg.ndata[dgl.NID])
            sub_ntypes = ntypes[parent_nids]
            print('type0:', np.sum(sub_ntypes == 0))
            print('type1:', np.sum(sub_ntypes == 1))
            print('type2:', np.sum(sub_ntypes == 2))
576
    subgs = dgl.transforms.metis_partition(g, 4, extra_cached_hops=1,
577
578
579
580
581
582
583
584
585
                                          balance_ntypes=ntypes, balance_edges=True)
    if subgs is not None:
        for i in subgs:
            subg = subgs[i]
            parent_nids = F.asnumpy(subg.ndata[dgl.NID])
            sub_ntypes = ntypes[parent_nids]
            print('type0:', np.sum(sub_ntypes == 0))
            print('type1:', np.sum(sub_ntypes == 1))
            print('type2:', np.sum(sub_ntypes == 2))
Da Zheng's avatar
Da Zheng committed
586
587

def check_metis_partition(g, extra_hops):
588
    subgs = dgl.transforms.metis_partition(g, 4, extra_cached_hops=extra_hops)
589
590
591
592
    num_inner_nodes = 0
    num_inner_edges = 0
    if subgs is not None:
        for part_id, subg in subgs.items():
Da Zheng's avatar
Da Zheng committed
593
594
595
596
597
            lnode_ids = np.nonzero(F.asnumpy(subg.ndata['inner_node']))[0]
            ledge_ids = np.nonzero(F.asnumpy(subg.edata['inner_edge']))[0]
            num_inner_nodes += len(lnode_ids)
            num_inner_edges += len(ledge_ids)
            assert np.sum(F.asnumpy(subg.ndata['part_id']) == part_id) == len(lnode_ids)
598
599
600
        assert num_inner_nodes == g.number_of_nodes()
        print(g.number_of_edges() - num_inner_edges)

Da Zheng's avatar
Da Zheng committed
601
602
603
    if extra_hops == 0:
        return

604
    # partitions with node reshuffling
605
    subgs = dgl.transforms.metis_partition(g, 4, extra_cached_hops=extra_hops, reshuffle=True)
606
607
    num_inner_nodes = 0
    num_inner_edges = 0
Da Zheng's avatar
Da Zheng committed
608
    edge_cnts = np.zeros((g.number_of_edges(),))
609
610
611
612
613
614
615
    if subgs is not None:
        for part_id, subg in subgs.items():
            lnode_ids = np.nonzero(F.asnumpy(subg.ndata['inner_node']))[0]
            ledge_ids = np.nonzero(F.asnumpy(subg.edata['inner_edge']))[0]
            num_inner_nodes += len(lnode_ids)
            num_inner_edges += len(ledge_ids)
            assert np.sum(F.asnumpy(subg.ndata['part_id']) == part_id) == len(lnode_ids)
Da Zheng's avatar
Da Zheng committed
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
            nids = F.asnumpy(subg.ndata[dgl.NID])

            # ensure the local node Ids are contiguous.
            parent_ids = F.asnumpy(subg.ndata[dgl.NID])
            parent_ids = parent_ids[:len(lnode_ids)]
            assert np.all(parent_ids == np.arange(parent_ids[0], parent_ids[-1] + 1))

            # count the local edges.
            parent_ids = F.asnumpy(subg.edata[dgl.EID])[ledge_ids]
            edge_cnts[parent_ids] += 1

            orig_ids = subg.ndata['orig_id']
            inner_node = F.asnumpy(subg.ndata['inner_node'])
            for nid in range(subg.number_of_nodes()):
                neighs = subg.predecessors(nid)
                old_neighs1 = F.gather_row(orig_ids, neighs)
                old_nid = F.asnumpy(orig_ids[nid])
                old_neighs2 = g.predecessors(old_nid)
                # If this is an inner node, it should have the full neighborhood.
                if inner_node[nid]:
                    assert np.all(np.sort(F.asnumpy(old_neighs1)) == np.sort(F.asnumpy(old_neighs2)))
        # Normally, local edges are only counted once.
        assert np.all(edge_cnts == 1)

640
641
642
        assert num_inner_nodes == g.number_of_nodes()
        print(g.number_of_edges() - num_inner_edges)

Da Zheng's avatar
Da Zheng committed
643
644
@unittest.skipIf(F._default_context_str == 'gpu', reason="It doesn't support GPU")
def test_reorder_nodes():
645
    g = create_large_graph(1000)
Da Zheng's avatar
Da Zheng committed
646
647
    new_nids = np.random.permutation(g.number_of_nodes())
    # TODO(zhengda) we need to test both CSR and COO.
648
    new_g = dgl.partition.reorder_nodes(g, new_nids)
Da Zheng's avatar
Da Zheng committed
649
650
651
652
653
654
655
656
657
    new_in_deg = new_g.in_degrees()
    new_out_deg = new_g.out_degrees()
    in_deg = g.in_degrees()
    out_deg = g.out_degrees()
    new_in_deg1 = F.scatter_row(in_deg, F.tensor(new_nids), in_deg)
    new_out_deg1 = F.scatter_row(out_deg, F.tensor(new_nids), out_deg)
    assert np.all(F.asnumpy(new_in_deg == new_in_deg1))
    assert np.all(F.asnumpy(new_out_deg == new_out_deg1))
    orig_ids = F.asnumpy(new_g.ndata['orig_id'])
658
659
660
661
662
663
664
    for nid in range(g.number_of_nodes()):
        neighs = F.asnumpy(g.successors(nid))
        new_neighs1 = new_nids[neighs]
        new_nid = new_nids[nid]
        new_neighs2 = new_g.successors(new_nid)
        assert np.all(np.sort(new_neighs1) == np.sort(F.asnumpy(new_neighs2)))

Da Zheng's avatar
Da Zheng committed
665
666
667
668
669
670
671
672
673
674
675
676
677
    for nid in range(new_g.number_of_nodes()):
        neighs = F.asnumpy(new_g.successors(nid))
        old_neighs1 = orig_ids[neighs]
        old_nid = orig_ids[nid]
        old_neighs2 = g.successors(old_nid)
        assert np.all(np.sort(old_neighs1) == np.sort(F.asnumpy(old_neighs2)))

        neighs = F.asnumpy(new_g.predecessors(nid))
        old_neighs1 = orig_ids[neighs]
        old_nid = orig_ids[nid]
        old_neighs2 = g.predecessors(old_nid)
        assert np.all(np.sort(old_neighs1) == np.sort(F.asnumpy(old_neighs2)))

nv-dlasalle's avatar
nv-dlasalle committed
678
@parametrize_idtype
679
def test_compact(idtype):
680
    g1 = dgl.heterograph({
681
682
683
        ('user', 'follow', 'user'): ([1, 3], [3, 5]),
        ('user', 'plays', 'game'): ([2, 3, 2], [4, 4, 5]),
        ('game', 'wished-by', 'user'): ([6, 5], [7, 7])},
684
        {'user': 20, 'game': 10}, idtype=idtype, device=F.ctx())
685
686

    g2 = dgl.heterograph({
687
688
        ('game', 'clicked-by', 'user'): ([3], [1]),
        ('user', 'likes', 'user'): ([1, 8], [8, 9])},
689
        {'user': 20, 'game': 10}, idtype=idtype, device=F.ctx())
690

691
    g3 = dgl.heterograph({('user', '_E', 'user'): ((0, 1), (1, 2))},
692
                         {'user': 10}, idtype=idtype, device=F.ctx())
693
    g4 = dgl.heterograph({('user', '_E', 'user'): ((1, 3), (3, 5))},
694
                         {'user': 10}, idtype=idtype, device=F.ctx())
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716

    def _check(g, new_g, induced_nodes):
        assert g.ntypes == new_g.ntypes
        assert g.canonical_etypes == new_g.canonical_etypes

        for ntype in g.ntypes:
            assert -1 not in induced_nodes[ntype]

        for etype in g.canonical_etypes:
            g_src, g_dst = g.all_edges(order='eid', etype=etype)
            g_src = F.asnumpy(g_src)
            g_dst = F.asnumpy(g_dst)
            new_g_src, new_g_dst = new_g.all_edges(order='eid', etype=etype)
            new_g_src_mapped = induced_nodes[etype[0]][F.asnumpy(new_g_src)]
            new_g_dst_mapped = induced_nodes[etype[2]][F.asnumpy(new_g_dst)]
            assert (g_src == new_g_src_mapped).all()
            assert (g_dst == new_g_dst_mapped).all()

    # Test default
    new_g1 = dgl.compact_graphs(g1)
    induced_nodes = {ntype: new_g1.nodes[ntype].data[dgl.NID] for ntype in new_g1.ntypes}
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
717
    assert new_g1.idtype == idtype
718
719
720
721
722
723
    assert set(induced_nodes['user']) == set([1, 3, 5, 2, 7])
    assert set(induced_nodes['game']) == set([4, 5, 6])
    _check(g1, new_g1, induced_nodes)

    # Test with always_preserve given a dict
    new_g1 = dgl.compact_graphs(
724
725
        g1, always_preserve={'game': F.tensor([4, 7], idtype)})
    assert new_g1.idtype == idtype
726
727
728
729
730
731
732
733
    induced_nodes = {ntype: new_g1.nodes[ntype].data[dgl.NID] for ntype in new_g1.ntypes}
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
    assert set(induced_nodes['user']) == set([1, 3, 5, 2, 7])
    assert set(induced_nodes['game']) == set([4, 5, 6, 7])
    _check(g1, new_g1, induced_nodes)

    # Test with always_preserve given a tensor
    new_g3 = dgl.compact_graphs(
734
        g3, always_preserve=F.tensor([1, 7], idtype))
735
736
    induced_nodes = {ntype: new_g3.nodes[ntype].data[dgl.NID] for ntype in new_g3.ntypes}
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
737

738
    assert new_g3.idtype == idtype
739
740
741
742
743
744
745
    assert set(induced_nodes['user']) == set([0, 1, 2, 7])
    _check(g3, new_g3, induced_nodes)

    # Test multiple graphs
    new_g1, new_g2 = dgl.compact_graphs([g1, g2])
    induced_nodes = {ntype: new_g1.nodes[ntype].data[dgl.NID] for ntype in new_g1.ntypes}
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
746
747
    assert new_g1.idtype == idtype
    assert new_g2.idtype == idtype
748
749
750
751
752
753
754
    assert set(induced_nodes['user']) == set([1, 3, 5, 2, 7, 8, 9])
    assert set(induced_nodes['game']) == set([3, 4, 5, 6])
    _check(g1, new_g1, induced_nodes)
    _check(g2, new_g2, induced_nodes)

    # Test multiple graphs with always_preserve given a dict
    new_g1, new_g2 = dgl.compact_graphs(
755
        [g1, g2], always_preserve={'game': F.tensor([4, 7], dtype=idtype)})
756
    induced_nodes = {ntype: new_g1.nodes[ntype].data[dgl.NID] for ntype in new_g1.ntypes}
757
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
758
759
    assert new_g1.idtype == idtype
    assert new_g2.idtype == idtype
760
761
762
763
764
765
766
    assert set(induced_nodes['user']) == set([1, 3, 5, 2, 7, 8, 9])
    assert set(induced_nodes['game']) == set([3, 4, 5, 6, 7])
    _check(g1, new_g1, induced_nodes)
    _check(g2, new_g2, induced_nodes)

    # Test multiple graphs with always_preserve given a tensor
    new_g3, new_g4 = dgl.compact_graphs(
767
        [g3, g4], always_preserve=F.tensor([1, 7], dtype=idtype))
768
769
    induced_nodes = {ntype: new_g3.nodes[ntype].data[dgl.NID] for ntype in new_g3.ntypes}
    induced_nodes = {k: F.asnumpy(v) for k, v in induced_nodes.items()}
770

771
772
773
    assert new_g3.idtype == idtype
    assert new_g4.idtype == idtype

774
775
776
777
    assert set(induced_nodes['user']) == set([0, 1, 2, 3, 5, 7])
    _check(g3, new_g3, induced_nodes)
    _check(g4, new_g4, induced_nodes)

778
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU to simple not implemented")
nv-dlasalle's avatar
nv-dlasalle committed
779
@parametrize_idtype
780
def test_to_simple(idtype):
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
    # homogeneous graph
    g = dgl.graph((F.tensor([0, 1, 2, 1]), F.tensor([1, 2, 0, 2])))
    g.ndata['h'] = F.tensor([[0.], [1.], [2.]])
    g.edata['h'] = F.tensor([[3.], [4.], [5.], [6.]])
    sg, wb = dgl.to_simple(g, writeback_mapping=True)
    u, v = g.all_edges(form='uv', order='eid')
    u = F.asnumpy(u).tolist()
    v = F.asnumpy(v).tolist()
    uv = list(zip(u, v))
    eid_map = F.asnumpy(wb)

    su, sv = sg.all_edges(form='uv', order='eid')
    su = F.asnumpy(su).tolist()
    sv = F.asnumpy(sv).tolist()
    suv = list(zip(su, sv))
    sc = F.asnumpy(sg.edata['count'])
    assert set(uv) == set(suv)
    for i, e in enumerate(suv):
        assert sc[i] == sum(e == _e for _e in uv)
    for i, e in enumerate(uv):
        assert eid_map[i] == suv.index(e)
    # shared ndata
    assert F.array_equal(sg.ndata['h'], g.ndata['h'])
    assert 'h' not in sg.edata
    # new ndata to sg
    sg.ndata['hh'] = F.tensor([[0.], [1.], [2.]])
    assert 'hh' not in g.ndata

    sg = dgl.to_simple(g, writeback_mapping=False, copy_ndata=False)
    assert 'h' not in sg.ndata
    assert 'h' not in sg.edata

813
814
815
816
817
818
819
820
    # test coalesce edge feature
    sg = dgl.to_simple(g, copy_edata=True, aggregator='arbitrary')
    assert F.allclose(sg.edata['h'][1], F.tensor([4.]))
    sg = dgl.to_simple(g, copy_edata=True, aggregator='sum')
    assert F.allclose(sg.edata['h'][1], F.tensor([10.]))
    sg = dgl.to_simple(g, copy_edata=True, aggregator='mean')
    assert F.allclose(sg.edata['h'][1], F.tensor([5.]))

821
    # heterogeneous graph
822
    g = dgl.heterograph({
823
824
825
        ('user', 'follow', 'user'): ([0, 1, 2, 1, 1, 1],
                                     [1, 3, 2, 3, 4, 4]),
        ('user', 'plays', 'game'): ([3, 2, 1, 1, 3, 2, 2], [5, 3, 4, 4, 5, 3, 3])},
826
        idtype=idtype, device=F.ctx())
827
828
829
830
831
    g.nodes['user'].data['h'] = F.tensor([0, 1, 2, 3, 4])
    g.nodes['user'].data['hh'] = F.tensor([0, 1, 2, 3, 4])
    g.edges['follow'].data['h'] = F.tensor([0, 1, 2, 3, 4, 5])
    sg, wb = dgl.to_simple(g, return_counts='weights', writeback_mapping=True, copy_edata=True)
    g.nodes['game'].data['h'] = F.tensor([0, 1, 2, 3, 4, 5])
832
833
834
835
836
837

    for etype in g.canonical_etypes:
        u, v = g.all_edges(form='uv', order='eid', etype=etype)
        u = F.asnumpy(u).tolist()
        v = F.asnumpy(v).tolist()
        uv = list(zip(u, v))
838
        eid_map = F.asnumpy(wb[etype])
839
840
841
842
843
844
845
846
847
848
849
850

        su, sv = sg.all_edges(form='uv', order='eid', etype=etype)
        su = F.asnumpy(su).tolist()
        sv = F.asnumpy(sv).tolist()
        suv = list(zip(su, sv))
        sw = F.asnumpy(sg.edges[etype].data['weights'])

        assert set(uv) == set(suv)
        for i, e in enumerate(suv):
            assert sw[i] == sum(e == _e for _e in uv)
        for i, e in enumerate(uv):
            assert eid_map[i] == suv.index(e)
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
    # shared ndata
    assert F.array_equal(sg.nodes['user'].data['h'], g.nodes['user'].data['h'])
    assert F.array_equal(sg.nodes['user'].data['hh'], g.nodes['user'].data['hh'])
    assert 'h' not in sg.nodes['game'].data
    # new ndata to sg
    sg.nodes['user'].data['hhh'] = F.tensor([0, 1, 2, 3, 4])
    assert 'hhh' not in g.nodes['user'].data
    # share edata
    feat_idx = F.asnumpy(wb[('user', 'follow', 'user')])
    _, indices = np.unique(feat_idx, return_index=True)
    assert np.array_equal(F.asnumpy(sg.edges['follow'].data['h']),
                          F.asnumpy(g.edges['follow'].data['h'])[indices])

    sg = dgl.to_simple(g, writeback_mapping=False, copy_ndata=False)
    for ntype in g.ntypes:
        assert g.number_of_nodes(ntype) == sg.number_of_nodes(ntype)
    assert 'h' not in sg.nodes['user'].data
    assert 'hh' not in sg.nodes['user'].data
869

870
871
872
873
874
875
876
877
878
879
    # verify DGLGraph.edge_ids() after dgl.to_simple()
    # in case ids are not initialized in underlying coo2csr()
    u = F.tensor([0, 1, 2])
    v = F.tensor([1, 2, 3])
    eids = F.tensor([0, 1, 2])
    g = dgl.graph((u, v))
    assert F.array_equal(g.edge_ids(u, v), eids)
    sg = dgl.to_simple(g)
    assert F.array_equal(sg.edge_ids(u, v), eids)

nv-dlasalle's avatar
nv-dlasalle committed
880
@parametrize_idtype
881
def test_to_block(idtype):
882
    def check(g, bg, ntype, etype, dst_nodes, include_dst_in_src=True):
883
884
885
        if dst_nodes is not None:
            assert F.array_equal(bg.dstnodes[ntype].data[dgl.NID], dst_nodes)
        n_dst_nodes = bg.number_of_nodes('DST/' + ntype)
886
887
888
889
        if include_dst_in_src:
            assert F.array_equal(
                bg.srcnodes[ntype].data[dgl.NID][:n_dst_nodes],
                bg.dstnodes[ntype].data[dgl.NID])
890
891
892
893
894
895

        g = g[etype]
        bg = bg[etype]
        induced_src = bg.srcdata[dgl.NID]
        induced_dst = bg.dstdata[dgl.NID]
        induced_eid = bg.edata[dgl.EID]
896

897
898
899
900
901
902
903
904
905
906
907
        bg_src, bg_dst = bg.all_edges(order='eid')
        src_ans, dst_ans = g.all_edges(order='eid')

        induced_src_bg = F.gather_row(induced_src, bg_src)
        induced_dst_bg = F.gather_row(induced_dst, bg_dst)
        induced_src_ans = F.gather_row(src_ans, induced_eid)
        induced_dst_ans = F.gather_row(dst_ans, induced_eid)

        assert F.array_equal(induced_src_bg, induced_src_ans)
        assert F.array_equal(induced_dst_bg, induced_dst_ans)

908
    def checkall(g, bg, dst_nodes, include_dst_in_src=True):
909
910
        for etype in g.etypes:
            ntype = g.to_canonical_etype(etype)[2]
911
            if dst_nodes is not None and ntype in dst_nodes:
912
                check(g, bg, ntype, etype, dst_nodes[ntype], include_dst_in_src)
913
            else:
914
                check(g, bg, ntype, etype, None, include_dst_in_src)
915
916

    g = dgl.heterograph({
917
918
        ('A', 'AA', 'A'): ([0, 2, 1, 3], [1, 3, 2, 4]),
        ('A', 'AB', 'B'): ([0, 1, 3, 1], [1, 3, 5, 6]),
919
        ('B', 'BA', 'A'): ([2, 3], [3, 2])}, idtype=idtype, device=F.ctx())
920
921
922
923
924
    g.nodes['A'].data['x'] = F.randn((5, 10))
    g.nodes['B'].data['x'] = F.randn((7, 5))
    g.edges['AA'].data['x'] = F.randn((4, 3))
    g.edges['AB'].data['x'] = F.randn((4, 3))
    g.edges['BA'].data['x'] = F.randn((2, 3))
925
926
    g_a = g['AA']

927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
    def check_features(g, bg):
        for ntype in bg.srctypes:
            for key in g.nodes[ntype].data:
                assert F.array_equal(
                    bg.srcnodes[ntype].data[key],
                    F.gather_row(g.nodes[ntype].data[key], bg.srcnodes[ntype].data[dgl.NID]))
        for ntype in bg.dsttypes:
            for key in g.nodes[ntype].data:
                assert F.array_equal(
                    bg.dstnodes[ntype].data[key],
                    F.gather_row(g.nodes[ntype].data[key], bg.dstnodes[ntype].data[dgl.NID]))
        for etype in bg.canonical_etypes:
            for key in g.edges[etype].data:
                assert F.array_equal(
                    bg.edges[etype].data[key],
                    F.gather_row(g.edges[etype].data[key], bg.edges[etype].data[dgl.EID]))

944
945
    bg = dgl.to_block(g_a)
    check(g_a, bg, 'A', 'AA', None)
946
    check_features(g_a, bg)
947
948
949
950
951
    assert bg.number_of_src_nodes() == 5
    assert bg.number_of_dst_nodes() == 4

    bg = dgl.to_block(g_a, include_dst_in_src=False)
    check(g_a, bg, 'A', 'AA', None, False)
952
    check_features(g_a, bg)
953
954
    assert bg.number_of_src_nodes() == 4
    assert bg.number_of_dst_nodes() == 4
955

956
    dst_nodes = F.tensor([4, 3, 2, 1], dtype=idtype)
957
958
    bg = dgl.to_block(g_a, dst_nodes)
    check(g_a, bg, 'A', 'AA', dst_nodes)
959
    check_features(g_a, bg)
960
961
962
963

    g_ab = g['AB']

    bg = dgl.to_block(g_ab)
964
    assert bg.idtype == idtype
965
966
967
    assert bg.number_of_nodes('SRC/B') == 4
    assert F.array_equal(bg.srcnodes['B'].data[dgl.NID], bg.dstnodes['B'].data[dgl.NID])
    assert bg.number_of_nodes('DST/A') == 0
968
    checkall(g_ab, bg, None)
969
    check_features(g_ab, bg)
970

971
    dst_nodes = {'B': F.tensor([5, 6, 3, 1], dtype=idtype)}
972
    bg = dgl.to_block(g, dst_nodes)
973
    assert bg.number_of_nodes('SRC/B') == 4
974
975
976
    assert F.array_equal(bg.srcnodes['B'].data[dgl.NID], bg.dstnodes['B'].data[dgl.NID])
    assert bg.number_of_nodes('DST/A') == 0
    checkall(g, bg, dst_nodes)
977
    check_features(g, bg)
978

979
    dst_nodes = {'A': F.tensor([4, 3, 2, 1], dtype=idtype), 'B': F.tensor([3, 5, 6, 1], dtype=idtype)}
980
981
    bg = dgl.to_block(g, dst_nodes=dst_nodes)
    checkall(g, bg, dst_nodes)
982
    check_features(g, bg)
983

984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
    # test specifying lhs_nodes with include_dst_in_src
    src_nodes = {}
    for ntype in dst_nodes.keys():
        # use the previous run to get the list of source nodes
        src_nodes[ntype] = bg.srcnodes[ntype].data[dgl.NID]
    bg = dgl.to_block(g, dst_nodes=dst_nodes, src_nodes=src_nodes)
    checkall(g, bg, dst_nodes)
    check_features(g, bg)

    # test without include_dst_in_src
    dst_nodes = {'A': F.tensor([4, 3, 2, 1], dtype=idtype), 'B': F.tensor([3, 5, 6, 1], dtype=idtype)}
    bg = dgl.to_block(g, dst_nodes=dst_nodes, include_dst_in_src=False)
    checkall(g, bg, dst_nodes, False)
    check_features(g, bg)

    # test specifying lhs_nodes without include_dst_in_src
    src_nodes = {}
    for ntype in dst_nodes.keys():
        # use the previous run to get the list of source nodes
        src_nodes[ntype] = bg.srcnodes[ntype].data[dgl.NID]
    bg = dgl.to_block(g, dst_nodes=dst_nodes, include_dst_in_src=False,
        src_nodes=src_nodes)
    checkall(g, bg, dst_nodes, False)
    check_features(g, bg)


1010
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
nv-dlasalle's avatar
nv-dlasalle committed
1011
@parametrize_idtype
1012
def test_remove_edges(idtype):
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
    def check(g1, etype, g, edges_removed):
        src, dst, eid = g.edges(etype=etype, form='all')
        src1, dst1 = g1.edges(etype=etype, order='eid')
        if etype is not None:
            eid1 = g1.edges[etype].data[dgl.EID]
        else:
            eid1 = g1.edata[dgl.EID]
        src1 = F.asnumpy(src1)
        dst1 = F.asnumpy(dst1)
        eid1 = F.asnumpy(eid1)
        src = F.asnumpy(src)
        dst = F.asnumpy(dst)
        eid = F.asnumpy(eid)
        sde_set = set(zip(src, dst, eid))

        for s, d, e in zip(src1, dst1, eid1):
            assert (s, d, e) in sde_set
        assert not np.isin(edges_removed, eid1).any()
1031
        assert g1.idtype == g.idtype
1032
1033
1034

    for fmt in ['coo', 'csr', 'csc']:
        for edges_to_remove in [[2], [2, 2], [3, 2], [1, 3, 1, 2]]:
1035
            g = dgl.graph(([0, 2, 1, 3], [1, 3, 2, 4]), idtype=idtype).formats(fmt)
1036
            g1 = dgl.remove_edges(g, F.tensor(edges_to_remove, idtype))
1037
1038
            check(g1, None, g, edges_to_remove)

1039
            g = dgl.from_scipy(
1040
                spsp.csr_matrix(([1, 1, 1, 1], ([0, 2, 1, 3], [1, 3, 2, 4])), shape=(5, 5)),
1041
1042
                idtype=idtype).formats(fmt)
            g1 = dgl.remove_edges(g, F.tensor(edges_to_remove, idtype))
1043
1044
1045
            check(g1, None, g, edges_to_remove)

    g = dgl.heterograph({
1046
1047
1048
        ('A', 'AA', 'A'): ([0, 2, 1, 3], [1, 3, 2, 4]),
        ('A', 'AB', 'B'): ([0, 1, 3, 1], [1, 3, 5, 6]),
        ('B', 'BA', 'A'): ([2, 3], [3, 2])}, idtype=idtype)
1049
    g2 = dgl.remove_edges(g, {'AA': F.tensor([2], idtype), 'AB': F.tensor([3], idtype), 'BA': F.tensor([1], idtype)})
1050
1051
1052
    check(g2, 'AA', g, [2])
    check(g2, 'AB', g, [3])
    check(g2, 'BA', g, [1])
1053

1054
    g3 = dgl.remove_edges(g, {'AA': F.tensor([], idtype), 'AB': F.tensor([3], idtype), 'BA': F.tensor([1], idtype)})
1055
1056
1057
1058
    check(g3, 'AA', g, [])
    check(g3, 'AB', g, [3])
    check(g3, 'BA', g, [1])

1059
    g4 = dgl.remove_edges(g, {'AB': F.tensor([3, 1, 2, 0], idtype)})
1060
    check(g4, 'AA', g, [])
1061
    check(g4, 'AB', g, [3, 1, 2, 0])
1062
1063
    check(g4, 'BA', g, [])

nv-dlasalle's avatar
nv-dlasalle committed
1064
@parametrize_idtype
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
def test_add_edges(idtype):
    # homogeneous graph
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    u = 0
    v = 1
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 3
    u = [0]
    v = [1]
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 4
    u = F.tensor(u, dtype=idtype)
    v = F.tensor(v, dtype=idtype)
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 5
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 0, 0], dtype=idtype))
1088
1089
1090
1091
1092
1093
1094
1095
1096
    assert F.array_equal(v, F.tensor([1, 2, 1, 1, 1], dtype=idtype))
    g = dgl.add_edges(g, [], [])
    g = dgl.add_edges(g, 0, [])
    g = dgl.add_edges(g, [], 0)
    assert g.device == F.ctx()
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 5
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 0, 0], dtype=idtype))
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
    assert F.array_equal(v, F.tensor([1, 2, 1, 1, 1], dtype=idtype))

    # node id larger than current max node id
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    u = F.tensor([0, 1], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    g = dgl.add_edges(g, u, v)
    assert g.number_of_nodes() == 4
    assert g.number_of_edges() == 4
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 1], dtype=idtype))
    assert F.array_equal(v, F.tensor([1, 2, 2, 3], dtype=idtype))

    # has data
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.copy_to(F.tensor([1, 1, 1], dtype=idtype), ctx=F.ctx())
    g.edata['h'] = F.copy_to(F.tensor([1, 1], dtype=idtype), ctx=F.ctx())
    u = F.tensor([0, 1], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    e_feat = {'h' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx()),
              'hh' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx())}
    g = dgl.add_edges(g, u, v, e_feat)
    assert g.number_of_nodes() == 4
    assert g.number_of_edges() == 4
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 1], dtype=idtype))
    assert F.array_equal(v, F.tensor([1, 2, 2, 3], dtype=idtype))
    assert F.array_equal(g.ndata['h'], F.tensor([1, 1, 1, 0], dtype=idtype))
    assert F.array_equal(g.edata['h'], F.tensor([1, 1, 2, 2], dtype=idtype))
    assert F.array_equal(g.edata['hh'], F.tensor([0, 0, 2, 2], dtype=idtype))

    # zero data graph
1129
    g = dgl.graph(([], []), num_nodes=0, idtype=idtype, device=F.ctx())
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
    u = F.tensor([0, 1], dtype=idtype)
    v = F.tensor([2, 2], dtype=idtype)
    e_feat = {'h' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx()),
              'hh' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx())}
    g = dgl.add_edges(g, u, v, e_feat)
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 2
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1], dtype=idtype))
    assert F.array_equal(v, F.tensor([2, 2], dtype=idtype))
    assert F.array_equal(g.edata['h'], F.tensor([2, 2], dtype=idtype))
    assert F.array_equal(g.edata['hh'], F.tensor([2, 2], dtype=idtype))

    # bipartite graph
1144
1145
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
    u = 0
    v = 1
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes('user') == 2
    assert g.number_of_nodes('game') == 3
    assert g.number_of_edges() == 3
    u = [0]
    v = [1]
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes('user') == 2
    assert g.number_of_nodes('game') == 3
    assert g.number_of_edges() == 4
    u = F.tensor(u, dtype=idtype)
    v = F.tensor(v, dtype=idtype)
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes('user') == 2
    assert g.number_of_nodes('game') == 3
    assert g.number_of_edges() == 5
    u, v = g.edges(form='uv')
    assert F.array_equal(u, F.tensor([0, 1, 0, 0, 0], dtype=idtype))
    assert F.array_equal(v, F.tensor([1, 2, 1, 1, 1], dtype=idtype))

    # node id larger than current max node id
1172
1173
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
    u = F.tensor([0, 2], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    g = dgl.add_edges(g, u, v)
    assert g.device == F.ctx()
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 4
    assert g.number_of_edges() == 4
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([1, 2, 2, 3], dtype=idtype))

    # has data
1186
1187
1188
1189
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
    g.nodes['user'].data['h'] = F.copy_to(F.tensor([1, 1], dtype=idtype), ctx=F.ctx())
    g.nodes['game'].data['h'] = F.copy_to(F.tensor([2, 2, 2], dtype=idtype), ctx=F.ctx())
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
    g.edata['h'] = F.copy_to(F.tensor([1, 1], dtype=idtype), ctx=F.ctx())
    u = F.tensor([0, 2], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    e_feat = {'h' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx()),
              'hh' : F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx())}
    g = dgl.add_edges(g, u, v, e_feat)
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 4
    assert g.number_of_edges() == 4
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1, 0, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([1, 2, 2, 3], dtype=idtype))
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1, 0], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2, 2, 0], dtype=idtype))
    assert F.array_equal(g.edata['h'], F.tensor([1, 1, 2, 2], dtype=idtype))
    assert F.array_equal(g.edata['hh'], F.tensor([0, 0, 2, 2], dtype=idtype))

    # heterogeneous graph
1208
    g = create_test_heterograph3(idtype)
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
    u = F.tensor([0, 2], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    g = dgl.add_edges(g, u, v, etype='plays')
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 4
    assert g.number_of_nodes('developer') == 2
    assert g.number_of_edges('plays') == 6
    assert g.number_of_edges('develops') == 2
    u, v = g.edges(form='uv', order='eid', etype='plays')
    assert F.array_equal(u, F.tensor([0, 1, 1, 2, 0, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 0, 1, 1, 2, 3], dtype=idtype))
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1, 1], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2, 0, 0], dtype=idtype))
    assert F.array_equal(g.edges['plays'].data['h'], F.tensor([1, 1, 1, 1, 0, 0], dtype=idtype))

    # add with feature
    e_feat = {'h': F.copy_to(F.tensor([2, 2], dtype=idtype), ctx=F.ctx())}
    u = F.tensor([0, 2], dtype=idtype)
    v = F.tensor([2, 3], dtype=idtype)
    g.nodes['game'].data['h'] =  F.copy_to(F.tensor([2, 2, 1, 1], dtype=idtype), ctx=F.ctx())
    g = dgl.add_edges(g, u, v, data=e_feat, etype='develops')
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 4
    assert g.number_of_nodes('developer') == 3
    assert g.number_of_edges('plays') == 6
    assert g.number_of_edges('develops') == 4
    u, v = g.edges(form='uv', order='eid', etype='develops')
    assert F.array_equal(u, F.tensor([0, 1, 0, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 1, 2, 3], dtype=idtype))
    assert F.array_equal(g.nodes['developer'].data['h'], F.tensor([3, 3, 0], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2, 1, 1], dtype=idtype))
    assert F.array_equal(g.edges['develops'].data['h'], F.tensor([0, 0, 2, 2], dtype=idtype))

nv-dlasalle's avatar
nv-dlasalle committed
1242
@parametrize_idtype
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
def test_add_nodes(idtype):
    # homogeneous Graphs
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.copy_to(F.tensor([1,1,1], dtype=idtype), ctx=F.ctx())
    new_g = dgl.add_nodes(g, 1)
    assert g.number_of_nodes() == 3
    assert new_g.number_of_nodes() == 4
    assert F.array_equal(new_g.ndata['h'], F.tensor([1, 1, 1, 0], dtype=idtype))

    # zero node graph
1253
    g = dgl.graph(([], []), num_nodes=3, idtype=idtype, device=F.ctx())
1254
1255
1256
1257
1258
1259
    g.ndata['h'] = F.copy_to(F.tensor([1,1,1], dtype=idtype), ctx=F.ctx())
    g = dgl.add_nodes(g, 1, data={'h' : F.copy_to(F.tensor([2],  dtype=idtype), ctx=F.ctx())})
    assert g.number_of_nodes() == 4
    assert F.array_equal(g.ndata['h'], F.tensor([1, 1, 1, 2], dtype=idtype))

    # bipartite graph
1260
1261
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1262
1263
1264
1265
1266
1267
1268
1269
1270
    g = dgl.add_nodes(g, 2, data={'h' : F.copy_to(F.tensor([2, 2],  dtype=idtype), ctx=F.ctx())}, ntype='user')
    assert g.number_of_nodes('user') == 4
    assert g.number_of_nodes('game') == 3
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([0, 0, 2, 2], dtype=idtype))
    g = dgl.add_nodes(g, 2, ntype='game')
    assert g.number_of_nodes('user') == 4
    assert g.number_of_nodes('game') == 5

    # heterogeneous graph
1271
    g = create_test_heterograph3(idtype)
1272
1273
1274
1275
1276
1277
1278
1279
    g = dgl.add_nodes(g, 1, ntype='user')
    g = dgl.add_nodes(g, 2, data={'h' : F.copy_to(F.tensor([2, 2],  dtype=idtype), ctx=F.ctx())}, ntype='game')
    assert g.number_of_nodes('user') == 4
    assert g.number_of_nodes('game') == 4
    assert g.number_of_nodes('developer') == 2
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1, 1, 0], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2, 2, 2], dtype=idtype))

nv-dlasalle's avatar
nv-dlasalle committed
1280
@parametrize_idtype
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
def test_remove_edges(idtype):
    # homogeneous Graphs
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    e = 0
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([2], dtype=idtype))
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    e = [0]
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([2], dtype=idtype))
    e = F.tensor([0], dtype=idtype)
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 0

    # has node data
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.copy_to(F.tensor([1, 2, 3], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_edges(g, 1)
    assert g.number_of_edges() == 1
    assert F.array_equal(g.ndata['h'], F.tensor([1, 2, 3], dtype=idtype))

    # has edge data
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.edata['h'] = F.copy_to(F.tensor([1, 2], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_edges(g, 0)
    assert g.number_of_edges() == 1
    assert F.array_equal(g.edata['h'], F.tensor([2], dtype=idtype))

    # invalid eid
    assert_fail = False
    try:
        g = dgl.remove_edges(g, 1)
    except:
        assert_fail = True
    assert assert_fail

    # bipartite graph
1324
1325
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1326
1327
1328
1329
1330
1331
    e = 0
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([2], dtype=idtype))
1332
1333
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
    e = [0]
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([2], dtype=idtype))
    e = F.tensor([0], dtype=idtype)
    g = dgl.remove_edges(g, e)
    assert g.number_of_edges() == 0

    # has data
1345
1346
1347
1348
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
    g.nodes['user'].data['h'] = F.copy_to(F.tensor([1, 1], dtype=idtype), ctx=F.ctx())
    g.nodes['game'].data['h'] = F.copy_to(F.tensor([2, 2, 2], dtype=idtype), ctx=F.ctx())
1349
1350
1351
1352
1353
1354
1355
1356
    g.edata['h'] = F.copy_to(F.tensor([1, 2], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_edges(g, 1)
    assert g.number_of_edges() == 1
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2, 2], dtype=idtype))
    assert F.array_equal(g.edata['h'], F.tensor([1], dtype=idtype))

    # heterogeneous graph
1357
    g = create_test_heterograph3(idtype)
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
    g.edges['plays'].data['h'] = F.copy_to(F.tensor([1, 2, 3, 4], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_edges(g, 1, etype='plays')
    assert g.number_of_edges('plays') == 3
    u, v = g.edges(form='uv', order='eid', etype='plays')
    assert F.array_equal(u, F.tensor([0, 1, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 1, 1], dtype=idtype))
    assert F.array_equal(g.edges['plays'].data['h'], F.tensor([1, 3, 4], dtype=idtype))
    # remove all edges of 'develops'
    g = dgl.remove_edges(g, [0, 1], etype='develops')
    assert g.number_of_edges('develops') == 0
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1, 1], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2, 2], dtype=idtype))
    assert F.array_equal(g.nodes['developer'].data['h'], F.tensor([3, 3], dtype=idtype))

1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
    # batched graph
    ctx = F.ctx()
    g1 = dgl.graph(([0, 1], [1, 2]), num_nodes=5, idtype=idtype, device=ctx)
    g2 = dgl.graph(([], []), idtype=idtype, device=ctx)
    g3 = dgl.graph(([2, 3, 4], [3, 2, 1]), idtype=idtype, device=ctx)
    bg = dgl.batch([g1, g2, g3])
    bg_r = dgl.remove_edges(bg, 2)
    assert bg.batch_size == bg_r.batch_size
    assert F.array_equal(bg.batch_num_nodes(), bg_r.batch_num_nodes())
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([2, 0, 2], dtype=F.int64))

    bg_r = dgl.remove_edges(bg, [0, 2])
    assert bg.batch_size == bg_r.batch_size
    assert F.array_equal(bg.batch_num_nodes(), bg_r.batch_num_nodes())
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([1, 0, 2], dtype=F.int64))

    bg_r = dgl.remove_edges(bg, F.tensor([0, 2], dtype=idtype))
    assert bg.batch_size == bg_r.batch_size
    assert F.array_equal(bg.batch_num_nodes(), bg_r.batch_num_nodes())
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([1, 0, 2], dtype=F.int64))

    # batched heterogeneous graph
    g1 = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1], [1, 2]),
        ('user', 'plays', 'game'): ([1, 3], [0, 1])
    }, num_nodes_dict={'user': 4, 'game': 3}, idtype=idtype, device=ctx)
    g2 = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 2], [3, 4]),
        ('user', 'plays', 'game'): ([], [])
    }, num_nodes_dict={'user': 6, 'game': 2}, idtype=idtype, device=ctx)
    g3 = dgl.heterograph({
        ('user', 'follows', 'user'): ([], []),
        ('user', 'plays', 'game'): ([1, 2], [1, 2])
    }, idtype=idtype, device=ctx)
    bg = dgl.batch([g1, g2, g3])
    bg_r = dgl.remove_edges(bg, 1, etype='follows')
    assert bg.batch_size == bg_r.batch_size
    ntypes = bg.ntypes
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([1, 2, 0], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges('plays'), bg.batch_num_edges('plays'))

    bg_r = dgl.remove_edges(bg, 2, etype='plays')
    assert bg.batch_size == bg_r.batch_size
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([2, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_edges(bg, [0, 1, 3], etype='follows')
    assert bg.batch_size == bg_r.batch_size
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([0, 1, 0], dtype=F.int64))
    assert F.array_equal(bg.batch_num_edges('plays'), bg_r.batch_num_edges('plays'))

    bg_r = dgl.remove_edges(bg, [1, 2], etype='plays')
    assert bg.batch_size == bg_r.batch_size
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_edges(bg, F.tensor([0, 1, 3], dtype=idtype), etype='follows')
    assert bg.batch_size == bg_r.batch_size
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([0, 1, 0], dtype=F.int64))
    assert F.array_equal(bg.batch_num_edges('plays'), bg_r.batch_num_edges('plays'))

    bg_r = dgl.remove_edges(bg, F.tensor([1, 2], dtype=idtype), etype='plays')
    assert bg.batch_size == bg_r.batch_size
    for nty in ntypes:
        assert F.array_equal(bg.batch_num_nodes(nty), bg_r.batch_num_nodes(nty))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

nv-dlasalle's avatar
nv-dlasalle committed
1450
@parametrize_idtype
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
1478
1479
1480
1481
1482
1483
1484
1485
1486
1487
1488
1489
1490
1491
1492
1493
1494
1495
1496
def test_remove_nodes(idtype):
    # homogeneous Graphs
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    n = 0
    g = dgl.remove_nodes(g, n)
    assert g.number_of_nodes() == 2
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0], dtype=idtype))
    assert F.array_equal(v, F.tensor([1], dtype=idtype))
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    n = [1]
    g = dgl.remove_nodes(g, n)
    assert g.number_of_nodes() == 2
    assert g.number_of_edges() == 0
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    n = F.tensor([2], dtype=idtype)
    g = dgl.remove_nodes(g, n)
    assert g.number_of_nodes() == 2
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0], dtype=idtype))
    assert F.array_equal(v, F.tensor([1], dtype=idtype))

    # invalid nid
    assert_fail = False
    try:
        g.remove_nodes(3)
    except:
        assert_fail = True
    assert assert_fail

    # has node and edge data
    g = dgl.graph(([0, 0, 2], [0, 1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['hv'] = F.copy_to(F.tensor([1, 2, 3], dtype=idtype), ctx=F.ctx())
    g.edata['he'] = F.copy_to(F.tensor([1, 2, 3], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_nodes(g, F.tensor([0], dtype=idtype))
    assert g.number_of_nodes() == 2
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([1], dtype=idtype))
    assert F.array_equal(g.ndata['hv'], F.tensor([2, 3], dtype=idtype))
    assert F.array_equal(g.edata['he'], F.tensor([3], dtype=idtype))

    # node id larger than current max node id
1497
1498
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1499
1500
1501
1502
1503
1504
1505
1506
    n = 0
    g = dgl.remove_nodes(g, n, ntype='user')
    assert g.number_of_nodes('user') == 1
    assert g.number_of_nodes('game') == 3
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0], dtype=idtype))
    assert F.array_equal(v, F.tensor([2], dtype=idtype))
1507
1508
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1509
1510
1511
1512
1513
1514
1515
1516
    n = [1]
    g = dgl.remove_nodes(g, n, ntype='user')
    assert g.number_of_nodes('user') == 1
    assert g.number_of_nodes('game') == 3
    assert g.number_of_edges() == 1
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0], dtype=idtype))
    assert F.array_equal(v, F.tensor([1], dtype=idtype))
1517
1518
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1519
1520
1521
1522
1523
1524
1525
1526
1527
1528
    n = F.tensor([0], dtype=idtype)
    g = dgl.remove_nodes(g, n, ntype='game')
    assert g.number_of_nodes('user') == 2
    assert g.number_of_nodes('game') == 2
    assert g.number_of_edges() == 2
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 1], dtype=idtype))
    assert F.array_equal(v, F.tensor([0 ,1], dtype=idtype))

    # heterogeneous graph
1529
    g = create_test_heterograph3(idtype)
1530
1531
1532
1533
1534
1535
1536
1537
1538
1539
1540
1541
1542
1543
1544
1545
1546
1547
    g.edges['plays'].data['h'] = F.copy_to(F.tensor([1, 2, 3, 4], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_nodes(g, 0, ntype='game')
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 1
    assert g.number_of_nodes('developer') == 2
    assert g.number_of_edges('plays') == 2
    assert g.number_of_edges('develops') == 1
    assert F.array_equal(g.nodes['user'].data['h'], F.tensor([1, 1, 1], dtype=idtype))
    assert F.array_equal(g.nodes['game'].data['h'], F.tensor([2], dtype=idtype))
    assert F.array_equal(g.nodes['developer'].data['h'], F.tensor([3, 3], dtype=idtype))
    u, v = g.edges(form='uv', order='eid', etype='plays')
    assert F.array_equal(u, F.tensor([1, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 0], dtype=idtype))
    assert F.array_equal(g.edges['plays'].data['h'], F.tensor([3, 4], dtype=idtype))
    u, v = g.edges(form='uv', order='eid', etype='develops')
    assert F.array_equal(u, F.tensor([1], dtype=idtype))
    assert F.array_equal(v, F.tensor([0], dtype=idtype))

1548
1549
1550
1551
1552
1553
1554
1555
1556
1557
1558
1559
1560
1561
1562
1563
1564
1565
1566
1567
1568
1569
1570
1571
1572
1573
1574
1575
1576
1577
1578
1579
1580
1581
1582
1583
1584
1585
1586
1587
1588
1589
1590
1591
1592
1593
1594
1595
1596
1597
1598
1599
1600
1601
1602
1603
1604
1605
1606
1607
1608
1609
1610
1611
1612
1613
1614
1615
1616
1617
1618
1619
1620
1621
1622
1623
1624
    # batched graph
    ctx = F.ctx()
    g1 = dgl.graph(([0, 1], [1, 2]), num_nodes=5, idtype=idtype, device=ctx)
    g2 = dgl.graph(([], []), idtype=idtype, device=ctx)
    g3 = dgl.graph(([2, 3, 4], [3, 2, 1]), idtype=idtype, device=ctx)
    bg = dgl.batch([g1, g2, g3])
    bg_r = dgl.remove_nodes(bg, 1)
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes(), F.tensor([4, 0, 5], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([0, 0, 3], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, [1, 7])
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes(), F.tensor([4, 0, 4], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([0, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, F.tensor([1, 7], dtype=idtype))
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes(), F.tensor([4, 0, 4], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges(), F.tensor([0, 0, 1], dtype=F.int64))

    # batched heterogeneous graph
    g1 = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1], [1, 2]),
        ('user', 'plays', 'game'): ([1, 3], [0, 1])
    }, num_nodes_dict={'user': 4, 'game': 3}, idtype=idtype, device=ctx)
    g2 = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 2], [3, 4]),
        ('user', 'plays', 'game'): ([], [])
    }, num_nodes_dict={'user': 6, 'game': 2}, idtype=idtype, device=ctx)
    g3 = dgl.heterograph({
        ('user', 'follows', 'user'): ([], []),
        ('user', 'plays', 'game'): ([1, 2], [1, 2])
    }, idtype=idtype, device=ctx)
    bg = dgl.batch([g1, g2, g3])
    bg_r = dgl.remove_nodes(bg, 1, ntype='user')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes('user'), F.tensor([3, 6, 3], dtype=F.int64))
    assert F.array_equal(bg.batch_num_nodes('game'), bg_r.batch_num_nodes('game'))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([0, 2, 0], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 2], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, 6, ntype='game')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg.batch_num_nodes('user'), bg_r.batch_num_nodes('user'))
    assert F.array_equal(bg_r.batch_num_nodes('game'), F.tensor([3, 2, 2], dtype=F.int64))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([2, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, [1, 5, 6, 11], ntype='user')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes('user'), F.tensor([3, 4, 2], dtype=F.int64))
    assert F.array_equal(bg.batch_num_nodes('game'), bg_r.batch_num_nodes('game'))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([0, 1, 0], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, [0, 3, 4, 7], ntype='game')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg.batch_num_nodes('user'), bg_r.batch_num_nodes('user'))
    assert F.array_equal(bg_r.batch_num_nodes('game'), F.tensor([2, 0, 2], dtype=F.int64))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, F.tensor([1, 5, 6, 11], dtype=idtype), ntype='user')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg_r.batch_num_nodes('user'), F.tensor([3, 4, 2], dtype=F.int64))
    assert F.array_equal(bg.batch_num_nodes('game'), bg_r.batch_num_nodes('game'))
    assert F.array_equal(bg_r.batch_num_edges('follows'), F.tensor([0, 1, 0], dtype=F.int64))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

    bg_r = dgl.remove_nodes(bg, F.tensor([0, 3, 4, 7], dtype=idtype), ntype='game')
    assert bg_r.batch_size == bg.batch_size
    assert F.array_equal(bg.batch_num_nodes('user'), bg_r.batch_num_nodes('user'))
    assert F.array_equal(bg_r.batch_num_nodes('game'), F.tensor([2, 0, 2], dtype=F.int64))
    assert F.array_equal(bg.batch_num_edges('follows'), bg_r.batch_num_edges('follows'))
    assert F.array_equal(bg_r.batch_num_edges('plays'), F.tensor([1, 0, 1], dtype=F.int64))

nv-dlasalle's avatar
nv-dlasalle committed
1625
@parametrize_idtype
1626
1627
1628
1629
1630
1631
1632
1633
1634
1635
1636
1637
1638
1639
def test_add_selfloop(idtype):
    # homogeneous graph
    g = dgl.graph(([0, 0, 2], [2, 1, 0]), idtype=idtype, device=F.ctx())
    g.edata['he'] = F.copy_to(F.tensor([1, 2, 3], dtype=idtype), ctx=F.ctx())
    g.ndata['hn'] = F.copy_to(F.tensor([1, 2, 3], dtype=idtype), ctx=F.ctx())
    g = dgl.add_self_loop(g)
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 6
    u, v = g.edges(form='uv', order='eid')
    assert F.array_equal(u, F.tensor([0, 0, 2, 0, 1, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([2, 1, 0, 0, 1, 2], dtype=idtype))
    assert F.array_equal(g.edata['he'], F.tensor([1, 2, 3, 0, 0, 0], dtype=idtype))

    # bipartite graph
1640
1641
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1, 2], [1, 2, 2])}, idtype=idtype, device=F.ctx())
1642
1643
1644
1645
1646
1647
1648
1649
    # nothing will happend
    raise_error = False
    try:
        g = dgl.add_self_loop(g)
    except:
        raise_error = True
    assert raise_error

1650
    g = create_test_heterograph5(idtype)
1651
1652
1653
1654
1655
1656
1657
1658
1659
1660
1661
1662
1663
1664
1665
1666
1667
1668
    g = dgl.add_self_loop(g, etype='follows')
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 2
    assert g.number_of_edges('follows') == 5
    assert g.number_of_edges('plays') == 2
    u, v = g.edges(form='uv', order='eid', etype='follows')
    assert F.array_equal(u, F.tensor([1, 2, 0, 1, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 1, 0, 1, 2], dtype=idtype))
    assert F.array_equal(g.edges['follows'].data['h'], F.tensor([1, 2, 0, 0, 0], dtype=idtype))
    assert F.array_equal(g.edges['plays'].data['h'], F.tensor([1, 2], dtype=idtype))

    raise_error = False
    try:
        g = dgl.add_self_loop(g, etype='plays')
    except:
        raise_error = True
    assert raise_error

nv-dlasalle's avatar
nv-dlasalle committed
1669
@parametrize_idtype
1670
1671
1672
1673
1674
1675
1676
1677
1678
1679
def test_remove_selfloop(idtype):
    # homogeneous graph
    g = dgl.graph(([0, 0, 0, 1], [1, 0, 0, 2]), idtype=idtype, device=F.ctx())
    g.edata['he'] = F.copy_to(F.tensor([1, 2, 3, 4], dtype=idtype), ctx=F.ctx())
    g = dgl.remove_self_loop(g)
    assert g.number_of_nodes() == 3
    assert g.number_of_edges() == 2
    assert F.array_equal(g.edata['he'], F.tensor([1, 4], dtype=idtype))

    # bipartite graph
1680
1681
    g = dgl.heterograph(
        {('user', 'plays', 'game'): ([0, 1, 2], [1, 2, 2])}, idtype=idtype, device=F.ctx())
1682
1683
1684
1685
1686
1687
1688
1689
    # nothing will happend
    raise_error = False
    try:
        g = dgl.remove_self_loop(g, etype='plays')
    except:
        raise_error = True
    assert raise_error

1690
    g = create_test_heterograph4(idtype)
1691
1692
1693
1694
1695
1696
1697
1698
1699
1700
1701
1702
1703
1704
1705
1706
1707
    g = dgl.remove_self_loop(g, etype='follows')
    assert g.number_of_nodes('user') == 3
    assert g.number_of_nodes('game') == 2
    assert g.number_of_edges('follows') == 2
    assert g.number_of_edges('plays') == 2
    u, v = g.edges(form='uv', order='eid', etype='follows')
    assert F.array_equal(u, F.tensor([1, 2], dtype=idtype))
    assert F.array_equal(v, F.tensor([0, 1], dtype=idtype))
    assert F.array_equal(g.edges['follows'].data['h'], F.tensor([2, 4], dtype=idtype))
    assert F.array_equal(g.edges['plays'].data['h'], F.tensor([1, 2], dtype=idtype))

    raise_error = False
    try:
        g = dgl.remove_self_loop(g, etype='plays')
    except:
        raise_error = True
    assert raise_error
1708

1709

nv-dlasalle's avatar
nv-dlasalle committed
1710
@parametrize_idtype
1711
def test_reorder_graph(idtype):
1712
1713
1714
1715
1716
    g = dgl.graph(([0, 1, 2, 3, 4], [2, 2, 3, 2, 3]),
                  idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.copy_to(F.randn((g.num_nodes(), 3)), ctx=F.ctx())
    g.edata['w'] = F.copy_to(F.randn((g.num_edges(), 2)), ctx=F.ctx())

1717
    # call with default: node_permute_algo=None, edge_permute_algo='src'
1718
    rg = dgl.reorder_graph(g)
1719
1720
1721
1722
1723
1724
    assert dgl.EID in rg.edata.keys()
    src = F.asnumpy(rg.edges()[0])
    assert np.array_equal(src, np.sort(src))

    # call with 'rcmk' node_permute_algo
    rg = dgl.reorder_graph(g, node_permute_algo='rcmk')
1725
1726
1727
1728
1729
1730
1731
1732
1733
1734
1735
1736
1737
1738
1739
1740
1741
    assert dgl.NID in rg.ndata.keys()
    assert dgl.EID in rg.edata.keys()
    src = F.asnumpy(rg.edges()[0])
    assert np.array_equal(src, np.sort(src))

    # call with 'dst' edge_permute_algo
    rg = dgl.reorder_graph(g, edge_permute_algo='dst')
    dst = F.asnumpy(rg.edges()[1])
    assert np.array_equal(dst, np.sort(dst))

    # call with unknown edge_permute_algo
    raise_error = False
    try:
        dgl.reorder_graph(g, edge_permute_algo='none')
    except:
        raise_error = True
    assert raise_error
1742
1743

    # reorder back to original according to stored ids
1744
    rg = dgl.reorder_graph(g, node_permute_algo='rcmk')
1745
1746
    rg2 = dgl.reorder_graph(rg, 'custom', permute_config={
        'nodes_perm': np.argsort(F.asnumpy(rg.ndata[dgl.NID]))})
1747
1748
1749
1750
    assert F.array_equal(g.ndata['h'], rg2.ndata['h'])
    assert F.array_equal(g.edata['w'], rg2.edata['w'])

    # do not store ids
1751
    rg = dgl.reorder_graph(g, store_ids=False)
1752
1753
1754
1755
1756
1757
1758
1759
1760
1761
1762
1763
1764
    assert not dgl.NID in rg.ndata.keys()
    assert not dgl.EID in rg.edata.keys()

    # metis does not work on windows.
    if os.name == 'nt':
        pass
    else:
        # metis_partition may fail for small graph.
        mg = create_large_graph(1000).to(F.ctx())

        # call with metis strategy, but k is not specified
        raise_error = False
        try:
1765
            dgl.reorder_graph(mg, node_permute_algo='metis')
1766
1767
1768
1769
1770
1771
1772
        except:
            raise_error = True
        assert raise_error

        # call with metis strategy, k is specified
        raise_error = False
        try:
1773
1774
            dgl.reorder_graph(mg,
                              node_permute_algo='metis', permute_config={'k': 2})
1775
1776
1777
1778
1779
1780
1781
1782
        except:
            raise_error = True
        assert not raise_error

    # call with qualified nodes_perm specified
    nodes_perm = np.random.permutation(g.num_nodes())
    raise_error = False
    try:
1783
1784
        dgl.reorder_graph(g, node_permute_algo='custom', permute_config={
            'nodes_perm': nodes_perm})
1785
1786
1787
1788
1789
1790
1791
    except:
        raise_error = True
    assert not raise_error

    # call with unqualified nodes_perm specified
    raise_error = False
    try:
1792
1793
        dgl.reorder_graph(g, node_permute_algo='custom', permute_config={
            'nodes_perm':  nodes_perm[:g.num_nodes() - 1]})
1794
1795
1796
1797
1798
1799
1800
    except:
        raise_error = True
    assert raise_error

    # call with unsupported strategy
    raise_error = False
    try:
1801
        dgl.reorder_graph(g, node_permute_algo='cmk')
1802
1803
1804
1805
1806
1807
1808
1809
1810
    except:
        raise_error = True
    assert raise_error

    # heterograph: not supported
    raise_error = False
    try:
        hg = dgl.heterogrpah({('user', 'follow', 'user'): (
            [0, 1], [1, 2])}, idtype=idtype, device=F.ctx())
1811
        dgl.reorder_graph(hg)
1812
1813
1814
1815
    except:
        raise_error = True
    assert raise_error

1816
1817
1818
1819
1820
1821
    # TODO: shall we fix them?
    # add 'csc' format if needed
    #fg = g.formats('csr')
    #assert 'csc' not in sum(fg.formats().values(), [])
    #rfg = dgl.reorder_graph(fg)
    #assert 'csc' in sum(rfg.formats().values(), [])
1822

Mufei Li's avatar
Mufei Li committed
1823
@unittest.skipIf(dgl.backend.backend_name == "tensorflow", reason="TF doesn't support a slicing operation")
nv-dlasalle's avatar
nv-dlasalle committed
1824
@parametrize_idtype
Mufei Li's avatar
Mufei Li committed
1825
1826
1827
1828
1829
1830
1831
1832
1833
1834
1835
1836
1837
1838
def test_norm_by_dst(idtype):
    # Case1: A homogeneous graph
    g = dgl.graph(([0, 1, 1], [1, 1, 2]), idtype=idtype, device=F.ctx())
    eweight = dgl.norm_by_dst(g)
    assert F.allclose(eweight, F.tensor([0.5, 0.5, 1.0]))

    # Case2: A heterogeneous graph
    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1], [1, 2]),
        ('user', 'plays', 'game'): ([0, 1, 1], [1, 1, 2])
    }, idtype=idtype, device=F.ctx())
    eweight = dgl.norm_by_dst(g, etype=('user', 'plays', 'game'))
    assert F.allclose(eweight, F.tensor([0.5, 0.5, 1.0]))

nv-dlasalle's avatar
nv-dlasalle committed
1839
@parametrize_idtype
1840
1841
1842
1843
1844
1845
1846
1847
1848
1849
1850
1851
1852
1853
1854
1855
1856
1857
1858
1859
1860
1861
1862
1863
1864
1865
1866
1867
1868
1869
1870
1871
1872
1873
1874
1875
1876
1877
1878
1879
1880
1881
1882
1883
1884
1885
1886
1887
1888
1889
1890
1891
1892
1893
1894
1895
1896
1897
1898
1899
1900
1901
1902
1903
1904
1905
1906
1907
1908
1909
1910
1911
1912
1913
1914
1915
1916
def test_module_add_self_loop(idtype):
    g = dgl.graph(([1, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 2))
    g.edata['w'] = F.randn((g.num_edges(), 3))

    # Case1: add self-loops with the default setting
    transform = dgl.AddSelfLoop()
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_nodes()
    assert new_g.num_edges() == 4
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (1, 1), (1, 2), (2, 2)}
    assert 'h' in new_g.ndata
    assert 'w' in new_g.edata

    # Case2: Remove self-loops first to avoid duplicate ones
    transform = dgl.AddSelfLoop(allow_duplicate=True)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_nodes()
    assert new_g.num_edges() == 5
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (1, 1), (1, 2), (2, 2)}
    assert 'h' in new_g.ndata
    assert 'w' in new_g.edata

    # Create a heterogeneous graph
    g = dgl.heterograph({
        ('user', 'plays', 'game'): ([0], [1]),
        ('user', 'follows', 'user'): ([1], [3])
    }, idtype=idtype, device=F.ctx())
    g.nodes['user'].data['h1'] = F.randn((4, 2))
    g.edges['plays'].data['w1'] = F.randn((1, 3))
    g.nodes['game'].data['h2'] = F.randn((2, 4))
    g.edges['follows'].data['w2'] = F.randn((1, 5))

    # Case3: add self-loops for a heterogeneous graph
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.ntypes == g.ntypes
    assert new_g.canonical_etypes == g.canonical_etypes
    for nty in new_g.ntypes:
        assert new_g.num_nodes(nty) == g.num_nodes(nty)
    assert new_g.num_edges('plays') == 1
    assert new_g.num_edges('follows') == 5
    assert 'h1' in new_g.nodes['user'].data
    assert 'h2' in new_g.nodes['game'].data
    assert 'w1' in new_g.edges['plays'].data
    assert 'w2' in new_g.edges['follows'].data

    # Case4: add self-etypes for a heterogeneous graph
    transform = dgl.AddSelfLoop(new_etypes=True)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.ntypes == g.ntypes
    assert set(new_g.canonical_etypes) == {
        ('user', 'plays', 'game'), ('user', 'follows', 'user'),
        ('user', 'self', 'user'), ('game', 'self', 'game')
    }
    for nty in new_g.ntypes:
        assert new_g.num_nodes(nty) == g.num_nodes(nty)
    assert new_g.num_edges('plays') == 1
    assert new_g.num_edges('follows') == 5
    assert new_g.num_edges(('user', 'self', 'user')) == 4
    assert new_g.num_edges(('game', 'self', 'game')) == 2
    assert 'h1' in new_g.nodes['user'].data
    assert 'h2' in new_g.nodes['game'].data
    assert 'w1' in new_g.edges['plays'].data
    assert 'w2' in new_g.edges['follows'].data

nv-dlasalle's avatar
nv-dlasalle committed
1917
@parametrize_idtype
1918
1919
1920
1921
1922
1923
1924
1925
1926
1927
1928
1929
1930
1931
1932
1933
1934
1935
1936
1937
1938
1939
1940
1941
1942
1943
1944
1945
1946
1947
1948
1949
1950
1951
1952
1953
1954
1955
1956
1957
1958
1959
def test_module_remove_self_loop(idtype):
    transform = dgl.RemoveSelfLoop()

    # Case1: homogeneous graph
    g = dgl.graph(([1, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 2))
    g.edata['w'] = F.randn((g.num_edges(), 3))
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_nodes()
    assert new_g.num_edges() == 1
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(1, 2)}
    assert 'h' in new_g.ndata
    assert 'w' in new_g.edata

    # Case2: heterogeneous graph
    g = dgl.heterograph({
        ('user', 'plays', 'game'): ([0, 1], [1, 1]),
        ('user', 'follows', 'user'): ([1, 2], [2, 2])
    }, idtype=idtype, device=F.ctx())
    g.nodes['user'].data['h1'] = F.randn((3, 2))
    g.edges['plays'].data['w1'] = F.randn((2, 3))
    g.nodes['game'].data['h2'] = F.randn((2, 4))
    g.edges['follows'].data['w2'] = F.randn((2, 5))

    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.ntypes == g.ntypes
    assert new_g.canonical_etypes == g.canonical_etypes
    for nty in new_g.ntypes:
        assert new_g.num_nodes(nty) == g.num_nodes(nty)
    assert new_g.num_edges('plays') == 2
    assert new_g.num_edges('follows') == 1
    assert 'h1' in new_g.nodes['user'].data
    assert 'h2' in new_g.nodes['game'].data
    assert 'w1' in new_g.edges['plays'].data
    assert 'w2' in new_g.edges['follows'].data

nv-dlasalle's avatar
nv-dlasalle committed
1960
@parametrize_idtype
1961
1962
1963
1964
1965
1966
1967
1968
1969
1970
1971
1972
1973
1974
1975
1976
1977
1978
1979
1980
1981
1982
1983
1984
1985
1986
1987
1988
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
2022
2023
2024
2025
2026
2027
2028
2029
2030
2031
2032
2033
2034
2035
2036
2037
2038
2039
2040
2041
2042
2043
2044
2045
2046
def test_module_add_reverse(idtype):
    transform = dgl.AddReverse()

    # Case1: Add reverse edges for a homogeneous graph
    g = dgl.graph(([0], [1]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 3))
    g.edata['w'] = F.randn((g.num_edges(), 2))
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert g.num_nodes() == new_g.num_nodes()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 0)}
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    assert F.allclose(g.edata['w'], F.narrow_row(new_g.edata['w'], 0, 1))
    assert F.allclose(F.narrow_row(new_g.edata['w'], 1, 2), F.zeros((1, 2), F.float32, F.ctx()))

    # Case2: Add reverse edges for a homogeneous graph and copy edata
    transform = dgl.AddReverse(copy_edata=True)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert g.num_nodes() == new_g.num_nodes()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 0)}
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    assert F.allclose(g.edata['w'], F.narrow_row(new_g.edata['w'], 0, 1))
    assert F.allclose(g.edata['w'], F.narrow_row(new_g.edata['w'], 1, 2))

    # Case3: Add reverse edges for a heterogeneous graph
    g = dgl.heterograph({
        ('user', 'plays', 'game'): ([0, 1], [1, 1]),
        ('user', 'follows', 'user'): ([1, 2], [2, 2])
    }, device=F.ctx())
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert g.ntypes == new_g.ntypes
    assert set(new_g.canonical_etypes) == {
        ('user', 'plays', 'game'), ('user', 'follows', 'user'), ('game', 'rev_plays', 'user')}
    for nty in g.ntypes:
        assert g.num_nodes(nty) == new_g.num_nodes(nty)

    src, dst = new_g.edges(etype='plays')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 1)}

    src, dst = new_g.edges(etype='follows')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(1, 2), (2, 2), (2, 1)}

    src, dst = new_g.edges(etype='rev_plays')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(1, 1), (1, 0)}

    # Case4: Enforce reverse edge types for symmetric canonical edge types
    transform = dgl.AddReverse(sym_new_etype=True)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert g.ntypes == new_g.ntypes
    assert set(new_g.canonical_etypes) == {
        ('user', 'plays', 'game'), ('user', 'follows', 'user'),
        ('game', 'rev_plays', 'user'), ('user', 'rev_follows', 'user')}
    for nty in g.ntypes:
        assert g.num_nodes(nty) == new_g.num_nodes(nty)

    src, dst = new_g.edges(etype='plays')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 1)}

    src, dst = new_g.edges(etype='follows')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(1, 2), (2, 2)}

    src, dst = new_g.edges(etype='rev_plays')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(1, 1), (1, 0)}

    src, dst = new_g.edges(etype='rev_follows')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(2, 1), (2, 2)}

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not supported for to_simple")
nv-dlasalle's avatar
nv-dlasalle committed
2047
@parametrize_idtype
2048
2049
2050
2051
2052
2053
2054
2055
2056
2057
2058
2059
2060
2061
2062
2063
2064
2065
2066
2067
2068
2069
2070
2071
2072
2073
2074
2075
2076
2077
2078
2079
2080
2081
2082
2083
2084
2085
def test_module_to_simple(idtype):
    transform = dgl.ToSimple()
    g = dgl.graph(([0, 1, 1], [1, 2, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 2))
    g.edata['w'] = F.tensor([[0.1], [0.2], [0.3]])
    sg = transform(g)
    assert sg.device == g.device
    assert sg.idtype == g.idtype
    assert sg.num_nodes() == g.num_nodes()
    assert sg.num_edges() == 2
    src, dst = sg.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 2)}
    assert F.allclose(sg.edata['count'], F.tensor([1, 2]))
    assert F.allclose(sg.ndata['h'], g.ndata['h'])

    g = dgl.heterograph({
        ('user', 'follows', 'user'): ([0, 1, 1], [1, 2, 2]),
        ('user', 'plays', 'game'): ([0, 1, 0], [1, 1, 1])
    })
    sg = transform(g)
    assert sg.device == g.device
    assert sg.idtype == g.idtype
    assert sg.ntypes == g.ntypes
    assert sg.canonical_etypes == g.canonical_etypes
    for nty in sg.ntypes:
        assert sg.num_nodes(nty) == g.num_nodes(nty)
    for ety in sg.canonical_etypes:
        assert sg.num_edges(ety) == 2

    src, dst = sg.edges(etype='follows')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 2)}

    src, dst = sg.edges(etype='plays')
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 1)}

nv-dlasalle's avatar
nv-dlasalle committed
2086
@parametrize_idtype
2087
2088
2089
2090
2091
2092
2093
2094
2095
2096
2097
2098
2099
2100
2101
2102
2103
2104
2105
2106
2107
2108
def test_module_line_graph(idtype):
    transform = dgl.LineGraph()
    g = dgl.graph(([0, 1, 1], [1, 0, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.tensor([[0.], [1.], [2.]])
    g.edata['w'] = F.tensor([[0.], [0.1], [0.2]])
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_edges()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (0, 2), (1, 0)}

    transform = dgl.LineGraph(backtracking=False)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_edges()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 2)}

nv-dlasalle's avatar
nv-dlasalle committed
2109
@parametrize_idtype
2110
2111
2112
2113
2114
2115
2116
2117
2118
2119
2120
2121
2122
def test_module_khop_graph(idtype):
    transform = dgl.KHopGraph(2)
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 2))
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_nodes() == g.num_nodes()
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 2)}

nv-dlasalle's avatar
nv-dlasalle committed
2123
@parametrize_idtype
2124
2125
2126
2127
2128
2129
2130
2131
2132
2133
2134
2135
2136
2137
2138
2139
2140
2141
2142
2143
2144
2145
2146
2147
2148
2149
2150
2151
2152
2153
2154
2155
2156
2157
2158
2159
2160
2161
2162
2163
2164
2165
2166
2167
2168
2169
2170
2171
2172
2173
2174
2175
2176
2177
2178
2179
2180
2181
def test_module_add_metapaths(idtype):
    g = dgl.heterograph({
        ('person', 'author', 'paper'): ([0, 0, 1], [1, 2, 2]),
        ('paper', 'accepted', 'venue'): ([1], [0]),
        ('paper', 'rejected', 'venue'): ([2], [1])
    }, idtype=idtype, device=F.ctx())
    g.nodes['venue'].data['h'] = F.randn((g.num_nodes('venue'), 2))
    g.edges['author'].data['h'] = F.randn((g.num_edges('author'), 3))

    # Case1: keep_orig_edges is True
    metapaths = {
        'accepted': [('person', 'author', 'paper'), ('paper', 'accepted', 'venue')],
        'rejected': [('person', 'author', 'paper'), ('paper', 'rejected', 'venue')]
    }
    transform = dgl.AddMetaPaths(metapaths)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.ntypes == g.ntypes
    assert set(new_g.canonical_etypes) == {
        ('person', 'author', 'paper'), ('paper', 'accepted', 'venue'),
        ('paper', 'rejected', 'venue'), ('person', 'accepted', 'venue'),
        ('person', 'rejected', 'venue')
    }
    for nty in new_g.ntypes:
        assert new_g.num_nodes(nty) == g.num_nodes(nty)
    for ety in g.canonical_etypes:
        assert new_g.num_edges(ety) == g.num_edges(ety)
    assert F.allclose(g.nodes['venue'].data['h'], new_g.nodes['venue'].data['h'])
    assert F.allclose(g.edges['author'].data['h'], new_g.edges['author'].data['h'])

    src, dst = new_g.edges(etype=('person', 'accepted', 'venue'))
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0)}

    src, dst = new_g.edges(etype=('person', 'rejected', 'venue'))
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 1)}

    # Case2: keep_orig_edges is False
    transform = dgl.AddMetaPaths(metapaths, keep_orig_edges=False)
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.ntypes == g.ntypes
    assert len(new_g.canonical_etypes) == 2
    for nty in new_g.ntypes:
        assert new_g.num_nodes(nty) == g.num_nodes(nty)
    assert F.allclose(g.nodes['venue'].data['h'], new_g.nodes['venue'].data['h'])

    src, dst = new_g.edges(etype=('person', 'accepted', 'venue'))
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0)}

    src, dst = new_g.edges(etype=('person', 'rejected', 'venue'))
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 1)}

nv-dlasalle's avatar
nv-dlasalle committed
2182
@parametrize_idtype
2183
2184
2185
2186
2187
2188
2189
2190
2191
2192
2193
2194
def test_module_compose(idtype):
    g = dgl.graph(([0, 1], [1, 2]), idtype=idtype, device=F.ctx())
    transform = dgl.Compose([dgl.AddReverse(), dgl.AddSelfLoop()])
    new_g = transform(g)
    assert new_g.device == g.device
    assert new_g.idtype == g.idtype
    assert new_g.num_edges() == 7

    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 1), (1, 2), (1, 0), (2, 1), (0, 0), (1, 1), (2, 2)}

nv-dlasalle's avatar
nv-dlasalle committed
2195
@parametrize_idtype
2196
2197
2198
2199
2200
2201
2202
2203
2204
2205
2206
2207
2208
2209
2210
def test_module_gcnnorm(idtype):
    g = dgl.heterograph({
        ('A', 'r1', 'A'): ([0, 1, 2], [0, 0, 1]),
        ('A', 'r2', 'B'): ([0, 0], [1, 1]),
        ('B', 'r3', 'B'): ([0, 1, 2], [0, 0, 1])
    }, idtype=idtype, device=F.ctx())
    g.edges['r3'].data['w'] = F.tensor([0.1, 0.2, 0.3])
    transform = dgl.GCNNorm()
    new_g = transform(g)
    assert 'w' not in new_g.edges[('A', 'r2', 'B')].data
    assert F.allclose(new_g.edges[('A', 'r1', 'A')].data['w'],
                      F.tensor([1./2, 1./math.sqrt(2), 0.]))
    assert F.allclose(new_g.edges[('B', 'r3', 'B')].data['w'], F.tensor([1./3, 2./3, 0.]))

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2211
@parametrize_idtype
2212
2213
2214
2215
2216
2217
2218
2219
2220
2221
2222
2223
2224
2225
2226
2227
2228
2229
2230
2231
2232
2233
2234
2235
def test_module_ppr(idtype):
    g = dgl.graph(([0, 1, 2, 3, 4], [2, 3, 4, 5, 3]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((6, 2))
    transform = dgl.PPR(avg_degree=2)
    new_g = transform(g)
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.num_nodes() == g.num_nodes()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (0, 2), (0, 4), (1, 1), (1, 3), (1, 5), (2, 2),
                    (2, 3), (2, 4), (3, 3), (3, 5), (4, 3), (4, 4), (4, 5), (5, 5)}
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    assert 'w' in new_g.edata

    # Prior edge weights
    g.edata['w'] = F.tensor([0.1, 0.2, 0.3, 0.4, 0.5])
    new_g = transform(g)
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (1, 1), (1, 3), (2, 2), (2, 3), (2, 4),
                    (3, 3), (3, 5), (4, 3), (4, 4), (4, 5), (5, 5)}

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2236
@parametrize_idtype
2237
2238
2239
2240
2241
2242
2243
2244
2245
2246
2247
2248
2249
2250
2251
2252
2253
2254
2255
2256
2257
def test_module_heat_kernel(idtype):
    # Case1: directed graph
    g = dgl.graph(([0, 1, 2, 3, 4], [2, 3, 4, 5, 3]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((6, 2))
    transform = dgl.HeatKernel(avg_degree=1)
    new_g = transform(g)
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.num_nodes() == g.num_nodes()
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    assert 'w' in new_g.edata

    # Case2: weighted undirected graph
    g = dgl.graph(([0, 1, 2, 3], [1, 0, 3, 2]), idtype=idtype, device=F.ctx())
    g.edata['w'] = F.tensor([0.1, 0.2, 0.3, 0.4])
    new_g = transform(g)
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (1, 1), (2, 2), (3, 3)}

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2258
@parametrize_idtype
2259
2260
2261
2262
2263
2264
2265
2266
2267
2268
2269
2270
2271
2272
2273
2274
2275
2276
2277
2278
2279
2280
def test_module_gdc(idtype):
    transform = dgl.GDC([0.1, 0.2, 0.1], avg_degree=1)
    g = dgl.graph(([0, 1, 2, 3, 4], [2, 3, 4, 5, 3]), idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((6, 2))
    new_g = transform(g)
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.num_nodes() == g.num_nodes()
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (0, 2), (0, 4), (1, 1), (1, 3), (1, 5), (2, 2), (2, 3),
                    (2, 4), (3, 3), (3, 5), (4, 3), (4, 4), (4, 5), (5, 5)}
    assert F.allclose(g.ndata['h'], new_g.ndata['h'])
    assert 'w' in new_g.edata

    # Prior edge weights
    g.edata['w'] = F.tensor([0.1, 0.2, 0.3, 0.4, 0.5])
    new_g = transform(g)
    src, dst = new_g.edges()
    eset = set(zip(list(F.asnumpy(src)), list(F.asnumpy(dst))))
    assert eset == {(0, 0), (1, 1), (2, 2), (3, 3), (4, 3), (4, 4), (5, 5)}

nv-dlasalle's avatar
nv-dlasalle committed
2281
@parametrize_idtype
2282
2283
2284
2285
2286
2287
2288
2289
def test_module_node_shuffle(idtype):
    transform = dgl.NodeShuffle()
    g = dgl.heterograph({
        ('A', 'r', 'B'): ([0, 1], [1, 2]),
    }, idtype=idtype, device=F.ctx())
    new_g = transform(g)

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2290
@parametrize_idtype
2291
2292
2293
2294
2295
2296
2297
2298
2299
2300
2301
2302
def test_module_drop_node(idtype):
    transform = dgl.DropNode()
    g = dgl.heterograph({
        ('A', 'r', 'B'): ([0, 1], [1, 2]),
    }, idtype=idtype, device=F.ctx())
    new_g = transform(g)
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.ntypes == g.ntypes
    assert new_g.canonical_etypes == g.canonical_etypes

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2303
@parametrize_idtype
2304
2305
2306
2307
2308
2309
2310
2311
2312
2313
2314
2315
def test_module_drop_edge(idtype):
    transform = dgl.DropEdge()
    g = dgl.heterograph({
        ('A', 'r1', 'B'): ([0, 1], [1, 2]),
        ('C', 'r2', 'C'): ([3, 4, 5], [6, 7, 8])
    }, idtype=idtype, device=F.ctx())
    new_g = transform(g)
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.ntypes == g.ntypes
    assert new_g.canonical_etypes == g.canonical_etypes

nv-dlasalle's avatar
nv-dlasalle committed
2316
@parametrize_idtype
2317
2318
2319
2320
2321
2322
2323
2324
2325
2326
2327
2328
2329
2330
def test_module_add_edge(idtype):
    transform = dgl.AddEdge()
    g = dgl.heterograph({
        ('A', 'r1', 'B'): ([0, 1, 2, 3, 4], [1, 2, 3, 4, 5]),
        ('C', 'r2', 'C'): ([0, 1, 2, 3, 4], [1, 2, 3, 4, 5])
    }, idtype=idtype, device=F.ctx())
    new_g = transform(g)
    assert new_g.num_edges(('A', 'r1', 'B')) == 6
    assert new_g.num_edges(('C', 'r2', 'C')) == 6
    assert new_g.idtype == g.idtype
    assert new_g.device == g.device
    assert new_g.ntypes == g.ntypes
    assert new_g.canonical_etypes == g.canonical_etypes

nv-dlasalle's avatar
nv-dlasalle committed
2331
@parametrize_idtype
2332
2333
2334
2335
2336
2337
2338
def test_module_random_walk_pe(idtype):
    transform = dgl.RandomWalkPE(2, 'rwpe')
    g = dgl.graph(([0, 1, 1], [1, 1, 0]), idtype=idtype, device=F.ctx())
    new_g = transform(g)
    tgt = F.copy_to(F.tensor([[0., 0.5],[0.5, 0.75]]), g.device)
    assert F.allclose(new_g.ndata['rwpe'], tgt)

nv-dlasalle's avatar
nv-dlasalle committed
2339
@parametrize_idtype
2340
2341
2342
2343
2344
2345
2346
2347
2348
2349
2350
2351
2352
2353
2354
def test_module_laplacian_pe(idtype):
    transform = dgl.LaplacianPE(2, 'lappe')
    g = dgl.graph(([2, 1, 0, 3, 1, 1],[3, 0, 1, 3, 3, 1]), idtype=idtype, device=F.ctx())
    new_g = transform(g)
    tgt = F.copy_to(F.tensor([[ 0.24971116, 0.],
        [ 0.11771496, 0.],
        [ 0.83237050, 1.],
        [ 0.48056933, 0.]]), g.device)
    # tensorflow has no abs() api
    if dgl.backend.backend_name == 'tensorflow':
        assert F.allclose(new_g.ndata['lappe'].__abs__(), tgt)
    # pytorch & mxnet
    else:
        assert F.allclose(new_g.ndata['lappe'].abs(), tgt)

2355
2356
2357
2358
2359
2360
2361
2362
2363
2364
2365
2366
2367
2368
2369
2370
2371
2372
@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
@pytest.mark.parametrize('g', get_cases(['has_scalar_e_feature']))
def test_module_sign(g):
    import torch

    ctx = F.ctx()
    g = g.to(ctx)
    adj = g.adj(transpose=True, scipy_fmt='coo').todense()
    adj = torch.tensor(adj).float().to(ctx)

    weight_adj = g.adj(transpose=True, scipy_fmt='coo').astype(float).todense()
    weight_adj = torch.tensor(weight_adj).float().to(ctx)
    src, dst = g.edges()
    src, dst = src.long(), dst.long()
    weight_adj[dst, src] = g.edata['scalar_w']

    # raw
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', diffuse_op='raw')
2373
    g = transform(g)
2374
2375
2376
    assert torch.allclose(g.ndata['out_feat_1'], torch.matmul(adj, g.ndata['h']))

    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', eweight_name='scalar_w', diffuse_op='raw')
2377
    g = transform(g)
2378
2379
2380
2381
2382
    assert torch.allclose(g.ndata['out_feat_1'], torch.matmul(weight_adj, g.ndata['h']))

    # rw
    adj_rw = torch.matmul(torch.diag(1 / adj.sum(dim=1)), adj)
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', diffuse_op='rw')
2383
    g = transform(g)
2384
2385
2386
2387
    assert torch.allclose(g.ndata['out_feat_1'], torch.matmul(adj_rw, g.ndata['h']))

    weight_adj_rw = torch.matmul(torch.diag(1 / weight_adj.sum(dim=1)), weight_adj)
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', eweight_name='scalar_w', diffuse_op='rw')
2388
    g = transform(g)
2389
2390
2391
2392
2393
    assert torch.allclose(g.ndata['out_feat_1'], torch.matmul(weight_adj_rw, g.ndata['h']))

    # gcn
    raw_eweight = g.edata['scalar_w']
    gcn_norm = dgl.GCNNorm()
2394
    g = gcn_norm(g)
2395
2396
2397
    adj_gcn = adj.clone()
    adj_gcn[dst, src] = g.edata.pop('w')
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', diffuse_op='gcn')
2398
2399
2400
    g = transform(g)
    target = torch.matmul(adj_gcn, g.ndata['h'])
    assert torch.allclose(g.ndata['out_feat_1'], target)
2401
2402

    gcn_norm = dgl.GCNNorm('scalar_w')
2403
    g = gcn_norm(g)
2404
2405
2406
2407
2408
    weight_adj_gcn = weight_adj.clone()
    weight_adj_gcn[dst, src] = g.edata['scalar_w']
    g.edata['scalar_w'] = raw_eweight
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h',
                                  eweight_name='scalar_w', diffuse_op='gcn')
2409
2410
2411
    g = transform(g)
    target = torch.matmul(weight_adj_gcn, g.ndata['h'])
    assert torch.allclose(g.ndata['out_feat_1'], target)
2412
2413
2414
2415

    # ppr
    alpha = 0.2
    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', diffuse_op='ppr', alpha=alpha)
2416
    g = transform(g)
2417
2418
2419
2420
2421
    target = (1 - alpha) * torch.matmul(adj_gcn, g.ndata['h']) + alpha * g.ndata['h']
    assert torch.allclose(g.ndata['out_feat_1'], target)

    transform = dgl.SIGNDiffusion(k=1, in_feat_name='h', eweight_name='scalar_w',
                                  diffuse_op='ppr', alpha=alpha)
2422
    g = transform(g)
2423
2424
2425
    target = (1 - alpha) * torch.matmul(weight_adj_gcn, g.ndata['h']) + alpha * g.ndata['h']
    assert torch.allclose(g.ndata['out_feat_1'], target)

2426
@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2427
@parametrize_idtype
2428
2429
def test_module_row_feat_normalizer(idtype):
    # Case1: Normalize features of a homogeneous graph.
2430
2431
    transform = dgl.RowFeatNormalizer(subtract_min=True,
                                      node_feat_names=['h'], edge_feat_names=['w'])
2432
2433
2434
2435
2436
2437
2438
2439
2440
2441
    g = dgl.rand_graph(5, 5, idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.randn((g.num_nodes(), 128))
    g.edata['w'] = F.randn((g.num_edges(), 128))
    g = transform(g)
    assert g.ndata['h'].shape == (g.num_nodes(), 128)
    assert g.edata['w'].shape == (g.num_edges(), 128)
    assert F.allclose(g.ndata['h'].sum(1), F.tensor([1.0, 1.0, 1.0, 1.0, 1.0]))
    assert F.allclose(g.edata['w'].sum(1), F.tensor([1.0, 1.0, 1.0, 1.0, 1.0]))

    # Case2: Normalize features of a heterogeneous graph.
2442
2443
    transform = dgl.RowFeatNormalizer(subtract_min=True,
                                      node_feat_names=['h', 'h2'], edge_feat_names=['w'])
2444
2445
2446
2447
2448
2449
2450
2451
2452
2453
2454
2455
2456
2457
2458
2459
2460
2461
2462
2463
    g = dgl.heterograph({
        ('user', 'follows', 'user'): (F.tensor([1, 2]), F.tensor([3, 4])),
        ('player', 'plays', 'game'): (F.tensor([2, 2]), F.tensor([1, 1]))
    }, idtype=idtype, device=F.ctx())
    g.ndata['h'] = {'game': F.randn((2, 128)), 'player': F.randn((3, 128))}
    g.ndata['h2'] = {'user': F.randn((5, 128))}
    g.edata['w'] = {('user', 'follows', 'user'): F.randn((2, 128)), ('player', 'plays', 'game'): F.randn((2, 128))}
    g = transform(g)
    assert g.ndata['h']['game'].shape == (2, 128)
    assert g.ndata['h']['player'].shape == (3, 128)
    assert g.ndata['h2']['user'].shape == (5, 128)
    assert g.edata['w'][('user', 'follows', 'user')].shape == (2, 128)
    assert g.edata['w'][('player', 'plays', 'game')].shape == (2, 128)
    assert F.allclose(g.ndata['h']['game'].sum(1), F.tensor([1.0, 1.0]))
    assert F.allclose(g.ndata['h']['player'].sum(1), F.tensor([1.0, 1.0, 1.0]))
    assert F.allclose(g.ndata['h2']['user'].sum(1), F.tensor([1.0, 1.0, 1.0, 1.0, 1.0]))
    assert F.allclose(g.edata['w'][('user', 'follows', 'user')].sum(1), F.tensor([1.0, 1.0]))
    assert F.allclose(g.edata['w'][('player', 'plays', 'game')].sum(1), F.tensor([1.0, 1.0]))

@unittest.skipIf(dgl.backend.backend_name != 'pytorch', reason='Only support PyTorch for now')
nv-dlasalle's avatar
nv-dlasalle committed
2464
@parametrize_idtype
2465
2466
def test_module_feat_mask(idtype):
    # Case1: Mask node and edge feature tensors of a homogeneous graph.
2467
    transform = dgl.FeatMask(node_feat_names=['h'], edge_feat_names=['w'])
2468
2469
2470
2471
2472
2473
2474
2475
2476
2477
2478
2479
2480
2481
2482
2483
2484
2485
2486
2487
2488
2489
2490
2491
2492
    g = dgl.rand_graph(5, 20, idtype=idtype, device=F.ctx())
    g.ndata['h'] = F.ones((g.num_nodes(), 10))
    g.edata['w'] = F.ones((g.num_edges(), 20))
    g = transform(g)
    assert g.device == g.device
    assert g.idtype == g.idtype
    assert g.ndata['h'].shape == (g.num_nodes(), 10)
    assert g.edata['w'].shape == (g.num_edges(), 20)

    # Case2: Mask node and edge feature tensors of a heterogeneous graph.
    g = dgl.heterograph({
        ('user', 'follows', 'user'): (F.tensor([1, 2]), F.tensor([3, 4])),
        ('player', 'plays', 'game'): (F.tensor([2, 2]), F.tensor([1, 1]))
    }, idtype=idtype, device=F.ctx())
    g.ndata['h'] = {'game': F.randn((2, 5)), 'player': F.randn((3, 5))}
    g.edata['w'] = {('user', 'follows', 'user'): F.randn((2, 5)),
                    ('player', 'plays', 'game'): F.randn((2, 5))}
    g = transform(g)
    assert g.device == g.device
    assert g.idtype == g.idtype
    assert g.ndata['h']['game'].shape == (2, 5)
    assert g.ndata['h']['player'].shape == (3, 5)
    assert g.edata['w'][('user', 'follows', 'user')].shape == (2, 5)
    assert g.edata['w'][('player', 'plays', 'game')].shape == (2, 5)

2493
if __name__ == '__main__':
2494
    test_partition_with_halo()
2495
    test_module_heat_kernel(F.int32)