modeling_bert.py

# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION.  All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch BERT model."""

from __future__ import absolute_import, division, print_function, unicode_literals

import json
import logging
import math
import os
import sys
from io import open

import torch
from torch import nn
from torch.nn import CrossEntropyLoss, MSELoss

from .modeling_utils import WEIGHTS_NAME, CONFIG_NAME, PretrainedConfig, PreTrainedModel, prune_linear_layer

logger = logging.getLogger(__name__)

BERT_PRETRAINED_MODEL_ARCHIVE_MAP = {
    'bert-base-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-uncased-pytorch_model.bin",
    'bert-large-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-pytorch_model.bin",
    'bert-base-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-cased-pytorch_model.bin",
    'bert-large-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-pytorch_model.bin",
    'bert-base-multilingual-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-uncased-pytorch_model.bin",
    'bert-base-multilingual-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-cased-pytorch_model.bin",
    'bert-base-chinese': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-chinese-pytorch_model.bin",
    'bert-base-german-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-german-cased-pytorch_model.bin",
    'bert-large-uncased-whole-word-masking': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-whole-word-masking-pytorch_model.bin",
    'bert-large-cased-whole-word-masking': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-whole-word-masking-pytorch_model.bin",
    'bert-large-uncased-whole-word-masking-finetuned-squad': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-whole-word-masking-finetuned-squad-pytorch_model.bin",
    'bert-large-cased-whole-word-masking-finetuned-squad': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-whole-word-masking-finetuned-squad-pytorch_model.bin",
    'bert-base-cased-finetuned-mrpc': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-cased-finetuned-mrpc-pytorch_model.bin",
}

BERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
    'bert-base-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-uncased-config.json",
    'bert-large-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-config.json",
    'bert-base-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-cased-config.json",
    'bert-large-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-config.json",
    'bert-base-multilingual-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-uncased-config.json",
    'bert-base-multilingual-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-cased-config.json",
    'bert-base-chinese': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-chinese-config.json",
    'bert-base-german-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-german-cased-config.json",
    'bert-large-uncased-whole-word-masking': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-whole-word-masking-config.json",
    'bert-large-cased-whole-word-masking': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-whole-word-masking-config.json",
    'bert-large-uncased-whole-word-masking-finetuned-squad': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased-whole-word-masking-finetuned-squad-config.json",
    'bert-large-cased-whole-word-masking-finetuned-squad': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased-whole-word-masking-finetuned-squad-config.json",
    'bert-base-cased-finetuned-mrpc': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-cased-finetuned-mrpc-config.json",
}


def load_tf_weights_in_bert(model, config, tf_checkpoint_path):
    """ Load tf checkpoints in a pytorch model
    """
    try:
        import re
        import numpy as np
        import tensorflow as tf
    except ImportError:
        logger.error("Loading a TensorFlow models in PyTorch, requires TensorFlow to be installed. Please see "
            "https://www.tensorflow.org/install/ for installation instructions.")
        raise
    tf_path = os.path.abspath(tf_checkpoint_path)
    logger.info("Converting TensorFlow checkpoint from {}".format(tf_path))
    # Load weights from TF model
    init_vars = tf.train.list_variables(tf_path)
    names = []
    arrays = []
    for name, shape in init_vars:
        logger.info("Loading TF weight {} with shape {}".format(name, shape))
        array = tf.train.load_variable(tf_path, name)
        names.append(name)
        arrays.append(array)

    for name, array in zip(names, arrays):
        name = name.split('/')
        # adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
        # which are not required for using pretrained model
        if any(n in ["adam_v", "adam_m", "global_step"] for n in name):
            logger.info("Skipping {}".format("/".join(name)))
            continue
        pointer = model
        for m_name in name:
            if re.fullmatch(r'[A-Za-z]+_\d+', m_name):
                l = re.split(r'_(\d+)', m_name)
            else:
                l = [m_name]
            if l[0] == 'kernel' or l[0] == 'gamma':
                pointer = getattr(pointer, 'weight')
            elif l[0] == 'output_bias' or l[0] == 'beta':
                pointer = getattr(pointer, 'bias')
            elif l[0] == 'output_weights':
                pointer = getattr(pointer, 'weight')
            elif l[0] == 'squad':
                pointer = getattr(pointer, 'classifier')
            else:
                try:
                    pointer = getattr(pointer, l[0])
                except AttributeError:
                    logger.info("Skipping {}".format("/".join(name)))
                    continue
            if len(l) >= 2:
                num = int(l[1])
                pointer = pointer[num]
        if m_name[-11:] == '_embeddings':
            pointer = getattr(pointer, 'weight')
        elif m_name == 'kernel':
            array = np.transpose(array)
        try:
            assert pointer.shape == array.shape
        except AssertionError as e:
            e.args += (pointer.shape, array.shape)
            raise
        logger.info("Initialize PyTorch weight {}".format(name))
        pointer.data = torch.from_numpy(array)
    return model


def gelu(x):
    """Implementation of the gelu activation function.
        For information: OpenAI GPT's gelu is slightly different (and gives slightly different results):
        0.5 * x * (1 + torch.tanh(math.sqrt(2 / math.pi) * (x + 0.044715 * torch.pow(x, 3))))
        Also see https://arxiv.org/abs/1606.08415
    """
    return x * 0.5 * (1.0 + torch.erf(x / math.sqrt(2.0)))


def swish(x):
    return x * torch.sigmoid(x)


ACT2FN = {"gelu": gelu, "relu": torch.nn.functional.relu, "swish": swish}


class BertConfig(PretrainedConfig):
    r"""
        :class:`~pytorch_transformers.BertConfig` is the configuration class to store the configuration of a
        `BertModel`.

        Arguments:
            vocab_size_or_config_json_file: Vocabulary size of `inputs_ids` in `BertModel`.
            hidden_size: Size of the encoder layers and the pooler layer.
            num_hidden_layers: Number of hidden layers in the Transformer encoder.
            num_attention_heads: Number of attention heads for each attention layer in
                the Transformer encoder.
            intermediate_size: The size of the "intermediate" (i.e., feed-forward)
                layer in the Transformer encoder.
            hidden_act: The non-linear activation function (function or string) in the
                encoder and pooler. If string, "gelu", "relu" and "swish" are supported.
            hidden_dropout_prob: The dropout probabilitiy for all fully connected
                layers in the embeddings, encoder, and pooler.
            attention_probs_dropout_prob: The dropout ratio for the attention
                probabilities.
            max_position_embeddings: The maximum sequence length that this model might
                ever be used with. Typically set this to something large just in case
                (e.g., 512 or 1024 or 2048).
            type_vocab_size: The vocabulary size of the `token_type_ids` passed into
                `BertModel`.
            initializer_range: The sttdev of the truncated_normal_initializer for
                initializing all weight matrices.
            layer_norm_eps: The epsilon used by LayerNorm.
    """
    pretrained_config_archive_map = BERT_PRETRAINED_CONFIG_ARCHIVE_MAP

    def __init__(self,
                 vocab_size_or_config_json_file=30522,
                 hidden_size=768,
                 num_hidden_layers=12,
                 num_attention_heads=12,
                 intermediate_size=3072,
                 hidden_act="gelu",
                 hidden_dropout_prob=0.1,
                 attention_probs_dropout_prob=0.1,
                 max_position_embeddings=512,
                 type_vocab_size=2,
                 initializer_range=0.02,
                 layer_norm_eps=1e-12,
                 **kwargs):
        """Constructs BertConfig.

        Arguments:
            vocab_size_or_config_json_file: Vocabulary size of `inputs_ids` in `BertModel`.
            hidden_size: Size of the encoder layers and the pooler layer.
            num_hidden_layers: Number of hidden layers in the Transformer encoder.
            num_attention_heads: Number of attention heads for each attention layer in
                the Transformer encoder.
            intermediate_size: The size of the "intermediate" (i.e., feed-forward)
                layer in the Transformer encoder.
            hidden_act: The non-linear activation function (function or string) in the
                encoder and pooler. If string, "gelu", "relu" and "swish" are supported.
            hidden_dropout_prob: The dropout probabilitiy for all fully connected
                layers in the embeddings, encoder, and pooler.
            attention_probs_dropout_prob: The dropout ratio for the attention
                probabilities.
            max_position_embeddings: The maximum sequence length that this model might
                ever be used with. Typically set this to something large just in case
                (e.g., 512 or 1024 or 2048).
            type_vocab_size: The vocabulary size of the `token_type_ids` passed into
                `BertModel`.
            initializer_range: The sttdev of the truncated_normal_initializer for
                initializing all weight matrices.
            layer_norm_eps: The epsilon used by LayerNorm.
        """
        super(BertConfig, self).__init__(**kwargs)
        if isinstance(vocab_size_or_config_json_file, str) or (sys.version_info[0] == 2
                        and isinstance(vocab_size_or_config_json_file, unicode)):
            with open(vocab_size_or_config_json_file, "r", encoding='utf-8') as reader:
                json_config = json.loads(reader.read())
            for key, value in json_config.items():
                self.__dict__[key] = value
        elif isinstance(vocab_size_or_config_json_file, int):
            self.vocab_size = vocab_size_or_config_json_file
            self.hidden_size = hidden_size
            self.num_hidden_layers = num_hidden_layers
            self.num_attention_heads = num_attention_heads
            self.hidden_act = hidden_act
            self.intermediate_size = intermediate_size
            self.hidden_dropout_prob = hidden_dropout_prob
            self.attention_probs_dropout_prob = attention_probs_dropout_prob
            self.max_position_embeddings = max_position_embeddings
            self.type_vocab_size = type_vocab_size
            self.initializer_range = initializer_range
            self.layer_norm_eps = layer_norm_eps
        else:
            raise ValueError("First argument must be either a vocabulary size (int)"
                             "or the path to a pretrained model config file (str)")



try:
    from apex.normalization.fused_layer_norm import FusedLayerNorm as BertLayerNorm
except ImportError:
    logger.info("Better speed can be achieved with apex installed from https://www.github.com/nvidia/apex .")
    class BertLayerNorm(nn.Module):
        def __init__(self, hidden_size, eps=1e-12):
            """Construct a layernorm module in the TF style (epsilon inside the square root).
            """
            super(BertLayerNorm, self).__init__()
            self.weight = nn.Parameter(torch.ones(hidden_size))
            self.bias = nn.Parameter(torch.zeros(hidden_size))
            self.variance_epsilon = eps

        def forward(self, x):
            u = x.mean(-1, keepdim=True)
            s = (x - u).pow(2).mean(-1, keepdim=True)
            x = (x - u) / torch.sqrt(s + self.variance_epsilon)
            return self.weight * x + self.bias

class BertEmbeddings(nn.Module):
    """Construct the embeddings from word, position and token_type embeddings.
    """
    def __init__(self, config):
        super(BertEmbeddings, self).__init__()
        self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=0)
        self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
        self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)

        # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
        # any TensorFlow checkpoint file
        self.LayerNorm = BertLayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, input_ids, token_type_ids=None):
        seq_length = input_ids.size(1)
        position_ids = torch.arange(seq_length, dtype=torch.long, device=input_ids.device)
        position_ids = position_ids.unsqueeze(0).expand_as(input_ids)
        if token_type_ids is None:
            token_type_ids = torch.zeros_like(input_ids)

        words_embeddings = self.word_embeddings(input_ids)
        position_embeddings = self.position_embeddings(position_ids)
        token_type_embeddings = self.token_type_embeddings(token_type_ids)

        embeddings = words_embeddings + position_embeddings + token_type_embeddings
        embeddings = self.LayerNorm(embeddings)
        embeddings = self.dropout(embeddings)
        return embeddings


class BertSelfAttention(nn.Module):
    def __init__(self, config):
        super(BertSelfAttention, self).__init__()
        if config.hidden_size % config.num_attention_heads != 0:
            raise ValueError(
                "The hidden size (%d) is not a multiple of the number of attention "
                "heads (%d)" % (config.hidden_size, config.num_attention_heads))
        self.output_attentions = config.output_attentions

        self.num_attention_heads = config.num_attention_heads
        self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
        self.all_head_size = self.num_attention_heads * self.attention_head_size

        self.query = nn.Linear(config.hidden_size, self.all_head_size)
        self.key = nn.Linear(config.hidden_size, self.all_head_size)
        self.value = nn.Linear(config.hidden_size, self.all_head_size)

        self.dropout = nn.Dropout(config.attention_probs_dropout_prob)

    def transpose_for_scores(self, x):
        new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
        x = x.view(*new_x_shape)
        return x.permute(0, 2, 1, 3)

    def forward(self, hidden_states, attention_mask, head_mask=None):
        mixed_query_layer = self.query(hidden_states)
        mixed_key_layer = self.key(hidden_states)
        mixed_value_layer = self.value(hidden_states)

        query_layer = self.transpose_for_scores(mixed_query_layer)
        key_layer = self.transpose_for_scores(mixed_key_layer)
        value_layer = self.transpose_for_scores(mixed_value_layer)

        # Take the dot product between "query" and "key" to get the raw attention scores.
        attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
        attention_scores = attention_scores / math.sqrt(self.attention_head_size)
        # Apply the attention mask is (precomputed for all layers in BertModel forward() function)
        attention_scores = attention_scores + attention_mask

        # Normalize the attention scores to probabilities.
        attention_probs = nn.Softmax(dim=-1)(attention_scores)

        # This is actually dropping out entire tokens to attend to, which might
        # seem a bit unusual, but is taken from the original Transformer paper.
        attention_probs = self.dropout(attention_probs)

        # Mask heads if we want to
        if head_mask is not None:
            attention_probs = attention_probs * head_mask

        context_layer = torch.matmul(attention_probs, value_layer)

        context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
        new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
        context_layer = context_layer.view(*new_context_layer_shape)

        outputs = (context_layer, attention_probs) if self.output_attentions else (context_layer,)
        return outputs


class BertSelfOutput(nn.Module):
    def __init__(self, config):
        super(BertSelfOutput, self).__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        self.LayerNorm = BertLayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        hidden_states = self.LayerNorm(hidden_states + input_tensor)
        return hidden_states


class BertAttention(nn.Module):
    def __init__(self, config):
        super(BertAttention, self).__init__()
        self.self = BertSelfAttention(config)
        self.output = BertSelfOutput(config)

    def prune_heads(self, heads):
        if len(heads) == 0:
            return
        mask = torch.ones(self.self.num_attention_heads, self.self.attention_head_size)
        for head in heads:
            mask[head] = 0
        mask = mask.view(-1).contiguous().eq(1)
        index = torch.arange(len(mask))[mask].long()
        # Prune linear layers
        self.self.query = prune_linear_layer(self.self.query, index)
        self.self.key = prune_linear_layer(self.self.key, index)
        self.self.value = prune_linear_layer(self.self.value, index)
        self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
        # Update hyper params
        self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
        self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads

    def forward(self, input_tensor, attention_mask, head_mask=None):
        self_outputs = self.self(input_tensor, attention_mask, head_mask)
        attention_output = self.output(self_outputs[0], input_tensor)
        outputs = (attention_output,) + self_outputs[1:]  # add attentions if we output them
        return outputs


class BertIntermediate(nn.Module):
    def __init__(self, config):
        super(BertIntermediate, self).__init__()
        self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
        if isinstance(config.hidden_act, str) or (sys.version_info[0] == 2 and isinstance(config.hidden_act, unicode)):
            self.intermediate_act_fn = ACT2FN[config.hidden_act]
        else:
            self.intermediate_act_fn = config.hidden_act

    def forward(self, hidden_states):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.intermediate_act_fn(hidden_states)
        return hidden_states


class BertOutput(nn.Module):
    def __init__(self, config):
        super(BertOutput, self).__init__()
        self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
        self.LayerNorm = BertLayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        hidden_states = self.LayerNorm(hidden_states + input_tensor)
        return hidden_states


class BertLayer(nn.Module):
    def __init__(self, config):
        super(BertLayer, self).__init__()
        self.attention = BertAttention(config)
        self.intermediate = BertIntermediate(config)
        self.output = BertOutput(config)

    def forward(self, hidden_states, attention_mask, head_mask=None):
        attention_outputs = self.attention(hidden_states, attention_mask, head_mask)
        attention_output = attention_outputs[0]
        intermediate_output = self.intermediate(attention_output)
        layer_output = self.output(intermediate_output, attention_output)
        outputs = (layer_output,) + attention_outputs[1:]  # add attentions if we output them
        return outputs


class BertEncoder(nn.Module):
    def __init__(self, config):
        super(BertEncoder, self).__init__()
        self.output_attentions = config.output_attentions
        self.output_hidden_states = config.output_hidden_states
        self.layer = nn.ModuleList([BertLayer(config) for _ in range(config.num_hidden_layers)])

    def forward(self, hidden_states, attention_mask, head_mask=None):
        all_hidden_states = ()
        all_attentions = ()
        for i, layer_module in enumerate(self.layer):
            if self.output_hidden_states:
                all_hidden_states = all_hidden_states + (hidden_states,)

            layer_outputs = layer_module(hidden_states, attention_mask, head_mask[i])
            hidden_states = layer_outputs[0]

            if self.output_attentions:
                all_attentions = all_attentions + (layer_outputs[1],)

        # Add last layer
        if self.output_hidden_states:
            all_hidden_states = all_hidden_states + (hidden_states,)

        outputs = (hidden_states,)
        if self.output_hidden_states:
            outputs = outputs + (all_hidden_states,)
        if self.output_attentions:
            outputs = outputs + (all_attentions,)
        return outputs  # outputs, (hidden states), (attentions)


class BertPooler(nn.Module):
    def __init__(self, config):
        super(BertPooler, self).__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        self.activation = nn.Tanh()

    def forward(self, hidden_states):
        # We "pool" the model by simply taking the hidden state corresponding
        # to the first token.
        first_token_tensor = hidden_states[:, 0]
        pooled_output = self.dense(first_token_tensor)
        pooled_output = self.activation(pooled_output)
        return pooled_output


class BertPredictionHeadTransform(nn.Module):
    def __init__(self, config):
        super(BertPredictionHeadTransform, self).__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        if isinstance(config.hidden_act, str) or (sys.version_info[0] == 2 and isinstance(config.hidden_act, unicode)):
            self.transform_act_fn = ACT2FN[config.hidden_act]
        else:
            self.transform_act_fn = config.hidden_act
        self.LayerNorm = BertLayerNorm(config.hidden_size, eps=config.layer_norm_eps)

    def forward(self, hidden_states):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.transform_act_fn(hidden_states)
        hidden_states = self.LayerNorm(hidden_states)
        return hidden_states


class BertLMPredictionHead(nn.Module):
    def __init__(self, config):
        super(BertLMPredictionHead, self).__init__()
        self.transform = BertPredictionHeadTransform(config)

        # The output weights are the same as the input embeddings, but there is
        # an output-only bias for each token.
        self.decoder = nn.Linear(config.hidden_size,
                                 config.vocab_size,
                                 bias=False)

        self.bias = nn.Parameter(torch.zeros(config.vocab_size))

    def forward(self, hidden_states):
        hidden_states = self.transform(hidden_states)
        hidden_states = self.decoder(hidden_states) + self.bias
        return hidden_states


class BertOnlyMLMHead(nn.Module):
    def __init__(self, config):
        super(BertOnlyMLMHead, self).__init__()
        self.predictions = BertLMPredictionHead(config)

    def forward(self, sequence_output):
        prediction_scores = self.predictions(sequence_output)
        return prediction_scores


class BertOnlyNSPHead(nn.Module):
    def __init__(self, config):
        super(BertOnlyNSPHead, self).__init__()
        self.seq_relationship = nn.Linear(config.hidden_size, 2)

    def forward(self, pooled_output):
        seq_relationship_score = self.seq_relationship(pooled_output)
        return seq_relationship_score


class BertPreTrainingHeads(nn.Module):
    def __init__(self, config):
        super(BertPreTrainingHeads, self).__init__()
        self.predictions = BertLMPredictionHead(config)
        self.seq_relationship = nn.Linear(config.hidden_size, 2)

    def forward(self, sequence_output, pooled_output):
        prediction_scores = self.predictions(sequence_output)
        seq_relationship_score = self.seq_relationship(pooled_output)
        return prediction_scores, seq_relationship_score


class BertPreTrainedModel(PreTrainedModel):
    """ An abstract class to handle weights initialization and
        a simple interface for dowloading and loading pretrained models.
    """
    config_class = BertConfig
    pretrained_model_archive_map = BERT_PRETRAINED_MODEL_ARCHIVE_MAP
    load_tf_weights = load_tf_weights_in_bert
    base_model_prefix = "bert"

    def __init__(self, *inputs, **kwargs):
        super(BertPreTrainedModel, self).__init__(*inputs, **kwargs)

    def init_weights(self, module):
        """ Initialize the weights.
        """
        if isinstance(module, (nn.Linear, nn.Embedding)):
            # Slightly different from the TF version which uses truncated_normal for initialization
            # cf https://github.com/pytorch/pytorch/pull/5617
            module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
        elif isinstance(module, BertLayerNorm):
            module.bias.data.zero_()
            module.weight.data.fill_(1.0)
        if isinstance(module, nn.Linear) and module.bias is not None:
            module.bias.data.zero_()


class BertModel(BertPreTrainedModel):
    r"""BERT model ("Bidirectional Embedding Representations from a Transformer").

    :class:`~pytorch_transformers.BertModel` is the basic BERT Transformer model with a layer of summed token, \
    position and sequence embeddings followed by a series of identical self-attention blocks (12 for BERT-base, 24 \
    for BERT-large). The model is instantiated with the following parameters.

    Arguments:
        config: a BertConfig class instance with the configuration to build a new model
        output_attentions: If True, also output attentions weights computed by the model at each layer. Default: False
        output_hidden_states: If True, also output hidden states computed by the model at each layer. Default: Fals


    Example::

        config = modeling.BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = modeling.BertModel(config=config)

    """
    def __init__(self, config):
        super(BertModel, self).__init__(config)

        self.embeddings = BertEmbeddings(config)
        self.encoder = BertEncoder(config)
        self.pooler = BertPooler(config)

        self.apply(self.init_weights)

    def _resize_token_embeddings(self, new_num_tokens):
        old_embeddings = self.embeddings.word_embeddings
        new_embeddings = self._get_resized_embeddings(old_embeddings, new_num_tokens)
        self.embeddings.word_embeddings = new_embeddings
        return self.embeddings.word_embeddings

    def _prune_heads(self, heads_to_prune):
        """ Prunes heads of the model.
            heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
            See base class PreTrainedModel
        """
        for layer, heads in heads_to_prune.items():
            self.encoder.layer[layer].attention.prune_heads(heads)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**


        Arguments:
            input_ids: a ``torch.LongTensor`` of shape [batch_size, sequence_length] with the word token indices in the \
                vocabulary(see the tokens pre-processing logic in the scripts `run_bert_extract_features.py`, \
                `run_bert_classifier.py` and `run_bert_squad.py`)
            token_type_ids: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token \
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to \
                a `sentence B` token (see BERT paper for more details).
            attention_mask: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices \
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max \
                input sequence length in the current batch. It's the mask that we typically use for attention when \
                a batch has varying length sentences.
            output_all_encoded_layers: boolean which controls the content of the `encoded_layers` output as described \
            below. Default: `True`.
            head_mask: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 \
            and 1. It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 \
            => head is not masked.


        Returns:
            A tuple composed of (encoded_layers, pooled_output). Encoded layers are controlled by the \
            ``output_all_encoded_layers`` argument.

            If ``output_all_encoded_layers`` is set to True, outputs a list of the full sequences of \
            encoded-hidden-states at the end of each attention \
            block (i.e. 12 full sequences for BERT-base, 24 for BERT-large), each encoded-hidden-state is a\
            ``torch.FloatTensor`` of size [batch_size, sequence_length, hidden_size].

            If set to False, outputs only the full sequence of hidden-states corresponding \
            to the last attention block of shape [batch_size, sequence_length, hidden_size].

            ``pooled_output`` is a ``torch.FloatTensor`` of size [batch_size, hidden_size] which is the output of a \
            classifier pretrained on top of the hidden state associated to the first character of the \
            input (`CLS`) to train on the Next-Sentence task (see BERT's paper).

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])


            all_encoder_layers, pooled_output = model(input_ids, token_type_ids, input_mask)
            # or
            all_encoder_layers, pooled_output = model.forward(input_ids, token_type_ids, input_mask)


        """
        if attention_mask is None:
            attention_mask = torch.ones_like(input_ids)
        if token_type_ids is None:
            token_type_ids = torch.zeros_like(input_ids)

        # We create a 3D attention mask from a 2D tensor mask.
        # Sizes are [batch_size, 1, 1, to_seq_length]
        # So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
        # this attention mask is more simple than the triangular masking of causal attention
        # used in OpenAI GPT, we just need to prepare the broadcast dimension here.
        extended_attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)

        # Since attention_mask is 1.0 for positions we want to attend and 0.0 for
        # masked positions, this operation will create a tensor which is 0.0 for
        # positions we want to attend and -10000.0 for masked positions.
        # Since we are adding it to the raw scores before the softmax, this is
        # effectively the same as removing these entirely.
        extended_attention_mask = extended_attention_mask.to(dtype=next(self.parameters()).dtype) # fp16 compatibility
        extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0

        # Prepare head mask if needed
        # 1.0 in head_mask indicate we keep the head
        # attention_probs has shape bsz x n_heads x N x N
        # input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
        # and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
        if head_mask is not None:
            if head_mask.dim() == 1:
                head_mask = head_mask.unsqueeze(0).unsqueeze(0).unsqueeze(-1).unsqueeze(-1)
                head_mask = head_mask.expand(self.config.num_hidden_layers, -1, -1, -1, -1)
            elif head_mask.dim() == 2:
                head_mask = head_mask.unsqueeze(1).unsqueeze(-1).unsqueeze(-1)  # We can specify head_mask for each layer
            head_mask = head_mask.to(dtype=next(self.parameters()).dtype) # switch to fload if need + fp16 compatibility
        else:
            head_mask = [None] * self.config.num_hidden_layers

        embedding_output = self.embeddings(input_ids, token_type_ids)
        encoder_outputs = self.encoder(embedding_output,
                                       extended_attention_mask,
                                       head_mask=head_mask)
        sequence_output = encoder_outputs[0]
        pooled_output = self.pooler(sequence_output)

        outputs = (sequence_output, pooled_output,) + encoder_outputs[1:]  # add hidden_states and attentions if they are here
        return outputs  # sequence_output, pooled_output, (hidden_states), (attentions)


class BertForPreTraining(BertPreTrainedModel):
    """BERT model with pre-training heads.
    This module comprises the BERT model followed by the two pre-training heads:

        - the masked language modeling head, and

        - the next sentence classification head.

    Args:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False

    Example ::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = BertForPreTraining(config)
    """
    def __init__(self, config):
        super(BertForPreTraining, self).__init__(config)

        self.bert = BertModel(config)
        self.cls = BertPreTrainingHeads(config)

        self.apply(self.init_weights)
        self.tie_weights()

    def tie_weights(self):
        """ Make sure we are sharing the input and output embeddings.
            Export to TorchScript can't handle parameter sharing so we are cloning them instead.
        """
        self._tie_or_clone_weights(self.cls.predictions.decoder,
                                   self.bert.embeddings.word_embeddings)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, masked_lm_labels=None,
                next_sentence_label=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Args:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary(see the tokens preprocessing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `masked_lm_labels`: optional masked language modeling labels: ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with indices selected in [-1, 0, ..., vocab_size]. All labels set to -1 are ignored (masked), the loss
                is only computed for the labels set in [0, ..., vocab_size]
            `next_sentence_label`: optional next sentence classification loss: ``torch.LongTensor`` of shape [batch_size]
                with indices selected in [0, 1].
                0 => next sentence is the continuation, 1 => next sentence is a random sentence.
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.


        Returns:
            Either a ``torch.Tensor`` or ``tuple(torch.Tensor, torch.Tensor)``.

            if ``masked_lm_labels`` and ``next_sentence_label`` are not ``None``, outputs the total_loss which is the \
             sum of the masked language modeling loss and the next \
            sentence classification loss.

            if ``masked_lm_labels`` or ``next_sentence_label`` is ``None``, outputs a tuple made of:

                - the masked language modeling logits of shape [batch_size, sequence_length, vocab_size]

                - the next sentence classification logits of shape [batch_size, 2].

        Example ::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
                num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

            model = BertForPreTraining(config)
            masked_lm_logits_scores, seq_relationship_logits = model(input_ids, token_type_ids, input_mask)
            # or
            masked_lm_logits_scores, seq_relationship_logits = model.forward(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)

        sequence_output, pooled_output = outputs[:2]
        prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)

        outputs = (prediction_scores, seq_relationship_score,) + outputs[2:]  # add hidden states and attention if they are here

        if masked_lm_labels is not None and next_sentence_label is not None:
            loss_fct = CrossEntropyLoss(ignore_index=-1)
            masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), masked_lm_labels.view(-1))
            next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
            total_loss = masked_lm_loss + next_sentence_loss
            outputs = (total_loss,) + outputs

        return outputs  # (loss), prediction_scores, seq_relationship_score, (hidden_states), (attentions)


class BertForMaskedLM(BertPreTrainedModel):
    """BERT model with the masked language modeling head.
    This module comprises the BERT model followed by the masked language modeling head.

    Args:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False

    Example::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = BertForMaskedLM(config)
    """
    def __init__(self, config):
        super(BertForMaskedLM, self).__init__(config)

        self.bert = BertModel(config)
        self.cls = BertOnlyMLMHead(config)

        self.apply(self.init_weights)
        self.tie_weights()

    def tie_weights(self):
        """ Make sure we are sharing the input and output embeddings.
            Export to TorchScript can't handle parameter sharing so we are cloning them instead.
        """
        self._tie_or_clone_weights(self.cls.predictions.decoder,
                                   self.bert.embeddings.word_embeddings)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, masked_lm_labels=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Args:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary(see the tokens preprocessing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `masked_lm_labels`: masked language modeling labels: ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with indices selected in [-1, 0, ..., vocab_size]. All labels set to -1 are ignored (masked), the loss
                is only computed for the labels set in [0, ..., vocab_size]
            `head_mask`: an optional ``torch.LongTensor`` of shape [num_heads] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.

        Returns:
            Masked language modeling loss if ``masked_lm_labels`` is specified, masked language modeling
            logits of shape [batch_size, sequence_length, vocab_size] otherwise.

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            masked_lm_logits_scores = model(input_ids, token_type_ids, input_mask)
            # or
            masked_lm_logits_scores = model.forward(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)

        sequence_output = outputs[0]
        prediction_scores = self.cls(sequence_output)

        outputs = (prediction_scores,) + outputs[2:]  # Add hidden states and attention is they are here
        if masked_lm_labels is not None:
            loss_fct = CrossEntropyLoss(ignore_index=-1)
            masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), masked_lm_labels.view(-1))
            outputs = (masked_lm_loss,) + outputs

        return outputs  # (masked_lm_loss), prediction_scores, (hidden_states), (attentions)


class BertForNextSentencePrediction(BertPreTrainedModel):
    """BERT model with next sentence prediction head.
    This module comprises the BERT model followed by the next sentence classification head.

    Args:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False

    Example::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = BertForNextSentencePrediction(config)
    """
    def __init__(self, config):
        super(BertForNextSentencePrediction, self).__init__(config)

        self.bert = BertModel(config)
        self.cls = BertOnlyNSPHead(config)

        self.apply(self.init_weights)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, next_sentence_label=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Args:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary(see the tokens pre-processing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `next_sentence_label`: next sentence classification loss: ``torch.LongTensor`` of shape [batch_size]
                with indices selected in [0, 1].
                0 => next sentence is the continuation, 1 => next sentence is a random sentence.
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between
                0 and 1.It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked,
                0.0 => head is not masked.

        Returns:
            If ``next_sentence_label`` is specified, outputs the total_loss which is the sum of the masked language
            modeling loss and the next sentence classification loss. If ``next_sentence_label`` is ``None``, outputs
            the next sentence classification logits of shape [batch_size, 2].


        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            seq_relationship_logits = model(input_ids, token_type_ids, input_mask)
            # or
            seq_relationship_logits = model.forward(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)
        pooled_output = outputs[1]

        seq_relationship_score = self.cls(pooled_output)

        outputs = (seq_relationship_score,) + outputs[2:]  # add hidden states and attention if they are here
        if next_sentence_label is not None:
            loss_fct = CrossEntropyLoss(ignore_index=-1)
            next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
            outputs = (next_sentence_loss,) + outputs

        return outputs  # (next_sentence_loss), seq_relationship_score, (hidden_states), (attentions)


class BertForSequenceClassification(BertPreTrainedModel):
    """BERT model for classification.
    This module is composed of the BERT model with a linear layer on top of
    the pooled output.

    Params:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False
        `num_labels`: the number of classes for the classifier. Default = 2.

    Example::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        num_labels = 2

        model = BertForSequenceClassification(config, num_labels)
    """
    def __init__(self, config):
        super(BertForSequenceClassification, self).__init__(config)
        self.num_labels = config.num_labels

        self.bert = BertModel(config)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)
        self.classifier = nn.Linear(config.hidden_size, self.config.num_labels)

        self.apply(self.init_weights)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, labels=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Parameters:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary. Items in the batch should begin with the special "CLS" token. (see the tokens preprocessing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `labels`: labels for the classification output: ``torch.LongTensor`` of shape [batch_size]
                with indices selected in [0, ..., num_labels].
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.

        Returns:
            If ``labels`` is not ``None``, outputs the CrossEntropy classification loss of the output with the labels.
            If ``labels`` is ``None``, outputs the classification logits of shape [batch_size, num_labels].

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            logits = model(input_ids, token_type_ids, input_mask)
            # or
            logits = model.forward(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)
        pooled_output = outputs[1]

        pooled_output = self.dropout(pooled_output)
        logits = self.classifier(pooled_output)

        outputs = (logits,) + outputs[2:]  # add hidden states and attention if they are here

        if labels is not None:
            if self.num_labels == 1:
                #  We are doing regression
                loss_fct = MSELoss()
                loss = loss_fct(logits.view(-1), labels.view(-1))
            else:
                loss_fct = CrossEntropyLoss()
                loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
            outputs = (loss,) + outputs

        return outputs  # (loss), logits, (hidden_states), (attentions)


class BertForMultipleChoice(BertPreTrainedModel):
    """BERT model for multiple choice tasks.
    This module is composed of the BERT model with a linear layer on top of the pooled output.

    Parameters:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False

    Example::

        # Already been converted into WordPiece token ids
        input_ids = torch.LongTensor([[[31, 51, 99], [15, 5, 0]], [[12, 16, 42], [14, 28, 57]]])
        input_mask = torch.LongTensor([[[1, 1, 1], [1, 1, 0]],[[1,1,0], [1, 0, 0]]])
        token_type_ids = torch.LongTensor([[[0, 0, 1], [0, 1, 0]],[[0, 1, 1], [0, 0, 1]]])
        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = BertForMultipleChoice(config)
        logits = model(input_ids, token_type_ids, input_mask)
    """
    def __init__(self, config):
        super(BertForMultipleChoice, self).__init__(config)

        self.bert = BertModel(config)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)
        self.classifier = nn.Linear(config.hidden_size, 1)

        self.apply(self.init_weights)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, labels=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Parameters:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, num_choices, sequence_length]
                with the word token indices in the vocabulary(see the tokens preprocessing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, num_choices, sequence_length]
                with the token types indices selected in [0, 1]. Type 0 corresponds to a `sentence A`
                and type 1 corresponds to a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, num_choices, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `labels`: labels for the classification output: ``torch.LongTensor`` of shape [batch_size]
                with indices selected in [0, ..., num_choices].
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.

        Returns:
            If ``labels`` is not ``None``, outputs the CrossEntropy classification loss of the output with the labels.
            If ``labels`` is ``None``, outputs the classification logits of shape [batch_size, num_labels].

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[[31, 51, 99], [15, 5, 0]], [[12, 16, 42], [14, 28, 57]]])
            input_mask = torch.LongTensor([[[1, 1, 1], [1, 1, 0]],[[1,1,0], [1, 0, 0]]])
            token_type_ids = torch.LongTensor([[[0, 0, 1], [0, 1, 0]],[[0, 1, 1], [0, 0, 1]]])
            config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
                num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

            model = BertForMultipleChoice(config)
            logits = model(input_ids, token_type_ids, input_mask)
        """
        """ Input shapes should be [bsz, num choices, seq length] """
        num_choices = input_ids.shape[1]

        flat_input_ids = input_ids.view(-1, input_ids.size(-1))
        flat_token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
        flat_attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
        outputs = self.bert(flat_input_ids, flat_token_type_ids, flat_attention_mask, head_mask=head_mask)
        pooled_output = outputs[1]

        pooled_output = self.dropout(pooled_output)
        logits = self.classifier(pooled_output)
        reshaped_logits = logits.view(-1, num_choices)

        outputs = (reshaped_logits,) + outputs[2:]  # add hidden states and attention if they are here

        if labels is not None:
            loss_fct = CrossEntropyLoss()
            loss = loss_fct(reshaped_logits, labels)
            outputs = (loss,) + outputs

        return outputs  # (loss), reshaped_logits, (hidden_states), (attentions)


class BertForTokenClassification(BertPreTrainedModel):
    """BERT model for token-level classification.
    This module is composed of the BERT model with a linear layer on top of
    the full hidden state of the last layer.

    Parameters:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False
        `num_labels`: the number of classes for the classifier. Default = 2.

    Example::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        num_labels = 2

        model = BertForTokenClassification(config, num_labels)
    """
    def __init__(self, config):
        super(BertForTokenClassification, self).__init__(config)
        self.num_labels = config.num_labels

        self.bert = BertModel(config)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)
        self.classifier = nn.Linear(config.hidden_size, config.num_labels)

        self.apply(self.init_weights)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, labels=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Parameters:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary(see the tokens pre-processing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `labels`: labels for the classification output: ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with indices selected in [0, ..., num_labels].
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.

        Returns:
            If ``labels`` is not ``None``, outputs the CrossEntropy classification loss of the output with the labels.
            If ``labels`` is ``None``, outputs the classification logits of shape [batch_size, sequence_length, num_labels].

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            logits = model(input_ids, token_type_ids, input_mask)
            # or
            logits = model.forward(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)
        sequence_output = outputs[0]

        sequence_output = self.dropout(sequence_output)
        logits = self.classifier(sequence_output)

        outputs = (logits,) + outputs[2:]  # add hidden states and attention if they are here
        if labels is not None:
            loss_fct = CrossEntropyLoss()
            # Only keep active parts of the loss
            if attention_mask is not None:
                active_loss = attention_mask.view(-1) == 1
                active_logits = logits.view(-1, self.num_labels)[active_loss]
                active_labels = labels.view(-1)[active_loss]
                loss = loss_fct(active_logits, active_labels)
            else:
                loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
            outputs = (loss,) + outputs

        return outputs  # (loss), logits, (hidden_states), (attentions)


class BertForQuestionAnswering(BertPreTrainedModel):
    """BERT model for Question Answering (span extraction).
    This module is composed of the BERT model with a linear layer on top of
    the sequence output that computes start_logits and end_logits

    Parameters:
        `config`: a BertConfig class instance with the configuration to build a new model
        `output_attentions`: If True, also output attentions weights computed by the model at each layer. Default: False
        `output_hidden_states`: If True, also output hidden states computed by the model at each layer. Default: False

    Example::

        config = BertConfig(vocab_size_or_config_json_file=32000, hidden_size=768,
            num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072)

        model = BertForQuestionAnswering(config)
    """
    def __init__(self, config):
        super(BertForQuestionAnswering, self).__init__(config)
        self.num_labels = config.num_labels

        self.bert = BertModel(config)
        self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)

        self.apply(self.init_weights)

    def forward(self, input_ids, token_type_ids=None, attention_mask=None, start_positions=None,
                end_positions=None, head_mask=None):
        """
        Performs a model forward pass. **Can be called by calling the class directly, once it has been instantiated.**

        Parameters:
            `input_ids`: a ``torch.LongTensor`` of shape [batch_size, sequence_length]
                with the word token indices in the vocabulary(see the tokens preprocessing logic in the scripts
                `run_bert_extract_features.py`, `run_bert_classifier.py` and `run_bert_squad.py`)
            `token_type_ids`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with the token
                types indices selected in [0, 1]. Type 0 corresponds to a `sentence A` and type 1 corresponds to
                a `sentence B` token (see BERT paper for more details).
            `attention_mask`: an optional ``torch.LongTensor`` of shape [batch_size, sequence_length] with indices
                selected in [0, 1]. It's a mask to be used if the input sequence length is smaller than the max
                input sequence length in the current batch. It's the mask that we typically use for attention when
                a batch has varying length sentences.
            `start_positions`: position of the first token for the labeled span: ``torch.LongTensor`` of shape [batch_size].
                Positions are clamped to the length of the sequence and position outside of the sequence are not taken
                into account for computing the loss.
            `end_positions`: position of the last token for the labeled span: ``torch.LongTensor`` of shape [batch_size].
                Positions are clamped to the length of the sequence and position outside of the sequence are not taken
                into account for computing the loss.
            `head_mask`: an optional ``torch.Tensor`` of shape [num_heads] or [num_layers, num_heads] with indices between 0 and 1.
                It's a mask to be used to nullify some heads of the transformer. 1.0 => head is fully masked, 0.0 => head is not masked.

        Returns:
            If ``start_positions`` and ``end_positions`` are not ``None``, outputs the total_loss which is the sum of the
            CrossEntropy loss for the start and end token positions.
            If ``start_positions`` or ``end_positions`` is ``None``, outputs a tuple of start_logits, end_logits which are the
            logits respectively for the start and end position tokens of shape [batch_size, sequence_length].

        Example::

            # Already been converted into WordPiece token ids
            input_ids = torch.LongTensor([[31, 51, 99], [15, 5, 0]])
            input_mask = torch.LongTensor([[1, 1, 1], [1, 1, 0]])
            token_type_ids = torch.LongTensor([[0, 0, 1], [0, 1, 0]])

            start_logits, end_logits = model(input_ids, token_type_ids, input_mask)
        """
        outputs = self.bert(input_ids, token_type_ids, attention_mask, head_mask=head_mask)
        sequence_output = outputs[0]

        logits = self.qa_outputs(sequence_output)
        start_logits, end_logits = logits.split(1, dim=-1)
        start_logits = start_logits.squeeze(-1)
        end_logits = end_logits.squeeze(-1)

        outputs = (start_logits, end_logits,) + outputs[2:]
        if start_positions is not None and end_positions is not None:
            # If we are on multi-GPU, split add a dimension
            if len(start_positions.size()) > 1:
                start_positions = start_positions.squeeze(-1)
            if len(end_positions.size()) > 1:
                end_positions = end_positions.squeeze(-1)
            # sometimes the start/end positions are outside our model inputs, we ignore these terms
            ignored_index = start_logits.size(1)
            start_positions.clamp_(0, ignored_index)
            end_positions.clamp_(0, ignored_index)

            loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
            start_loss = loss_fct(start_logits, start_positions)
            end_loss = loss_fct(end_logits, end_positions)
            total_loss = (start_loss + end_loss) / 2
            outputs = (total_loss,) + outputs

        return outputs  # (loss), start_logits, end_logits, (hidden_states), (attentions)