basic.py 198 KB
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# coding: utf-8
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"""Wrapper for C API of LightGBM."""
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# This import causes lib_lightgbm.{dll,dylib,so} to be loaded.
# It's intentionally done here, as early as possible, to avoid issues like
# "libgomp.so.1: cannot allocate memory in static TLS block" on aarch64 Linux.
#
# For details, see the "cannot allocate memory in static TLS block" entry in docs/FAQ.rst.
from .libpath import _LIB  # isort: skip

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import abc
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import ctypes
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import inspect
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import json
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import warnings
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from collections import OrderedDict
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from copy import deepcopy
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from enum import Enum
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from functools import wraps
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from os import SEEK_END, environ
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from os.path import getsize
from pathlib import Path
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from tempfile import NamedTemporaryFile
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from typing import TYPE_CHECKING, Any, Callable, Dict, Iterable, Iterator, List, Optional, Set, Tuple, Union
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import numpy as np
import scipy.sparse

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from .compat import (
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    CFFI_INSTALLED,
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    PANDAS_INSTALLED,
    PYARROW_INSTALLED,
    arrow_cffi,
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    arrow_is_boolean,
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    arrow_is_floating,
    arrow_is_integer,
    concat,
    pa_Array,
    pa_chunked_array,
    pa_ChunkedArray,
    pa_compute,
    pa_Table,
    pd_CategoricalDtype,
    pd_DataFrame,
    pd_Series,
)
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if TYPE_CHECKING:
    from typing import Literal

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    # typing.TypeGuard was only introduced in Python 3.10
    try:
        from typing import TypeGuard
    except ImportError:
        from typing_extensions import TypeGuard


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__all__ = [
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    "Booster",
    "Dataset",
    "LGBMDeprecationWarning",
    "LightGBMError",
    "register_logger",
    "Sequence",
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]

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_BoosterHandle = ctypes.c_void_p
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_DatasetHandle = ctypes.c_void_p
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_ctypes_int_ptr = Union[
    "ctypes._Pointer[ctypes.c_int32]",
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    "ctypes._Pointer[ctypes.c_int64]",
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]
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_ctypes_int_array = Union[
    "ctypes.Array[ctypes._Pointer[ctypes.c_int32]]",
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    "ctypes.Array[ctypes._Pointer[ctypes.c_int64]]",
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]
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_ctypes_float_ptr = Union[
    "ctypes._Pointer[ctypes.c_float]",
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    "ctypes._Pointer[ctypes.c_double]",
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]
_ctypes_float_array = Union[
    "ctypes.Array[ctypes._Pointer[ctypes.c_float]]",
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    "ctypes.Array[ctypes._Pointer[ctypes.c_double]]",
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]
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_LGBM_EvalFunctionResultType = Tuple[str, float, bool]
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_LGBM_BoosterBestScoreType = Dict[str, Dict[str, float]]
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_LGBM_BoosterEvalMethodResultType = Tuple[str, str, float, bool]
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_LGBM_BoosterEvalMethodResultWithStandardDeviationType = Tuple[str, str, float, bool, float]
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_LGBM_CategoricalFeatureConfiguration = Union[List[str], List[int], "Literal['auto']"]
_LGBM_FeatureNameConfiguration = Union[List[str], "Literal['auto']"]
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_LGBM_GroupType = Union[
    List[float],
    List[int],
    np.ndarray,
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    pd_Series,
    pa_Array,
    pa_ChunkedArray,
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]
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_LGBM_PositionType = Union[
    np.ndarray,
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    pd_Series,
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]
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_LGBM_InitScoreType = Union[
    List[float],
    List[List[float]],
    np.ndarray,
    pd_Series,
    pd_DataFrame,
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    pa_Table,
    pa_Array,
    pa_ChunkedArray,
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]
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_LGBM_TrainDataType = Union[
    str,
    Path,
    np.ndarray,
    pd_DataFrame,
    scipy.sparse.spmatrix,
    "Sequence",
    List["Sequence"],
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    List[np.ndarray],
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    pa_Table,
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]
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_LGBM_LabelType = Union[
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    List[float],
    List[int],
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    np.ndarray,
    pd_Series,
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    pd_DataFrame,
    pa_Array,
    pa_ChunkedArray,
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]
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_LGBM_PredictDataType = Union[
    str,
    Path,
    np.ndarray,
    pd_DataFrame,
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    scipy.sparse.spmatrix,
    pa_Table,
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]
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_LGBM_WeightType = Union[
    List[float],
    List[int],
    np.ndarray,
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    pd_Series,
    pa_Array,
    pa_ChunkedArray,
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]
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_LGBM_SetFieldType = Union[
    List[List[float]],
    List[List[int]],
    List[float],
    List[int],
    np.ndarray,
    pd_Series,
    pd_DataFrame,
    pa_Table,
    pa_Array,
    pa_ChunkedArray,
]

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ZERO_THRESHOLD = 1e-35

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_MULTICLASS_OBJECTIVES = {"multiclass", "multiclassova", "multiclass_ova", "ova", "ovr", "softmax"}

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class LightGBMError(Exception):
    """Error thrown by LightGBM."""

    pass


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def _is_zero(x: float) -> bool:
    return -ZERO_THRESHOLD <= x <= ZERO_THRESHOLD


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def _get_sample_count(total_nrow: int, params: str) -> int:
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    sample_cnt = ctypes.c_int(0)
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    _safe_call(
        _LIB.LGBM_GetSampleCount(
            ctypes.c_int32(total_nrow),
            _c_str(params),
            ctypes.byref(sample_cnt),
        )
    )
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    return sample_cnt.value

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def _np2d_to_np1d(mat: np.ndarray) -> Tuple[np.ndarray, int]:
    if mat.dtype in (np.float32, np.float64):
        dtype = mat.dtype
    else:
        dtype = np.float32
    if mat.flags["F_CONTIGUOUS"]:
        order = "F"
        layout = _C_API_IS_COL_MAJOR
    else:
        order = "C"
        layout = _C_API_IS_ROW_MAJOR
    # ensure dtype and order, copies if either do not match
    data = np.asarray(mat, dtype=dtype, order=order)
    # flatten array without copying
    return data.ravel(order=order), layout


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class _MissingType(Enum):
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    NONE = "None"
    NAN = "NaN"
    ZERO = "Zero"
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class _DummyLogger:
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    def info(self, msg: str) -> None:
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        print(msg)  # noqa: T201
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    def warning(self, msg: str) -> None:
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        warnings.warn(msg, stacklevel=3)


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_LOGGER: Any = _DummyLogger()
_INFO_METHOD_NAME = "info"
_WARNING_METHOD_NAME = "warning"
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def _has_method(logger: Any, method_name: str) -> bool:
    return callable(getattr(logger, method_name, None))


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def register_logger(
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    logger: Any,
    info_method_name: str = "info",
    warning_method_name: str = "warning",
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) -> None:
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    """Register custom logger.

    Parameters
    ----------
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    logger : Any
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        Custom logger.
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    info_method_name : str, optional (default="info")
        Method used to log info messages.
    warning_method_name : str, optional (default="warning")
        Method used to log warning messages.
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    """
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    if not _has_method(logger, info_method_name) or not _has_method(logger, warning_method_name):
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        raise TypeError(f"Logger must provide '{info_method_name}' and '{warning_method_name}' method")
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    global _LOGGER, _INFO_METHOD_NAME, _WARNING_METHOD_NAME
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    _LOGGER = logger
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    _INFO_METHOD_NAME = info_method_name
    _WARNING_METHOD_NAME = warning_method_name
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def _normalize_native_string(func: Callable[[str], None]) -> Callable[[str], None]:
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    """Join log messages from native library which come by chunks."""
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    msg_normalized: List[str] = []
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    @wraps(func)
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    def wrapper(msg: str) -> None:
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        nonlocal msg_normalized
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        if msg.strip() == "":
            msg = "".join(msg_normalized)
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            msg_normalized = []
            return func(msg)
        else:
            msg_normalized.append(msg)

    return wrapper


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def _log_info(msg: str) -> None:
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    getattr(_LOGGER, _INFO_METHOD_NAME)(msg)
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def _log_warning(msg: str) -> None:
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    getattr(_LOGGER, _WARNING_METHOD_NAME)(msg)
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@_normalize_native_string
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def _log_native(msg: str) -> None:
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    getattr(_LOGGER, _INFO_METHOD_NAME)(msg)
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def _log_callback(msg: bytes) -> None:
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    """Redirect logs from native library into Python."""
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    _log_native(str(msg.decode("utf-8")))
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# connect the Python logger to logging in lib_lightgbm
if not environ.get("LIGHTGBM_BUILD_DOC", False):
    _LIB.LGBM_GetLastError.restype = ctypes.c_char_p
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    callback = ctypes.CFUNCTYPE(None, ctypes.c_char_p)
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    _LIB.callback = callback(_log_callback)  # type: ignore[attr-defined]
    if _LIB.LGBM_RegisterLogCallback(_LIB.callback) != 0:
        raise LightGBMError(_LIB.LGBM_GetLastError().decode("utf-8"))
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_NUMERIC_TYPES = (int, float, bool)
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def _safe_call(ret: int) -> None:
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    """Check the return value from C API call.

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    Parameters
    ----------
    ret : int
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        The return value from C API calls.
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    """
    if ret != 0:
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        raise LightGBMError(_LIB.LGBM_GetLastError().decode("utf-8"))
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def _is_numeric(obj: Any) -> bool:
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    """Check whether object is a number or not, include numpy number, etc."""
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    try:
        float(obj)
        return True
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    except (TypeError, ValueError):
        # TypeError: obj is not a string or a number
        # ValueError: invalid literal
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        return False

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def _is_numpy_1d_array(data: Any) -> bool:
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    """Check whether data is a numpy 1-D array."""
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    return isinstance(data, np.ndarray) and len(data.shape) == 1
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def _is_numpy_column_array(data: Any) -> bool:
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    """Check whether data is a column numpy array."""
    if not isinstance(data, np.ndarray):
        return False
    shape = data.shape
    return len(shape) == 2 and shape[1] == 1


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def _cast_numpy_array_to_dtype(array: np.ndarray, dtype: "np.typing.DTypeLike") -> np.ndarray:
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    """Cast numpy array to given dtype."""
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    if array.dtype == dtype:
        return array
    return array.astype(dtype=dtype, copy=False)


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def _is_1d_list(data: Any) -> bool:
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    """Check whether data is a 1-D list."""
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    return isinstance(data, list) and (not data or _is_numeric(data[0]))
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def _is_list_of_numpy_arrays(data: Any) -> "TypeGuard[List[np.ndarray]]":
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    return isinstance(data, list) and all(isinstance(x, np.ndarray) for x in data)
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def _is_list_of_sequences(data: Any) -> "TypeGuard[List[Sequence]]":
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    return isinstance(data, list) and all(isinstance(x, Sequence) for x in data)
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def _is_1d_collection(data: Any) -> bool:
    """Check whether data is a 1-D collection."""
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    return _is_numpy_1d_array(data) or _is_numpy_column_array(data) or _is_1d_list(data) or isinstance(data, pd_Series)
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def _list_to_1d_numpy(
    data: Any,
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    dtype: "np.typing.DTypeLike",
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    name: str,
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) -> np.ndarray:
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    """Convert data to numpy 1-D array."""
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    if _is_numpy_1d_array(data):
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        return _cast_numpy_array_to_dtype(data, dtype)
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    elif _is_numpy_column_array(data):
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        _log_warning("Converting column-vector to 1d array")
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        array = data.ravel()
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        return _cast_numpy_array_to_dtype(array, dtype)
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    elif _is_1d_list(data):
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        return np.asarray(data, dtype=dtype)
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    elif isinstance(data, pd_Series):
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        _check_for_bad_pandas_dtypes(data.to_frame().dtypes)
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        return np.asarray(data, dtype=dtype)  # SparseArray should be supported as well
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    else:
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        raise TypeError(
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            f"Wrong type({type(data).__name__}) for {name}.\nIt should be list, numpy 1-D array or pandas Series"
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        )
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def _is_numpy_2d_array(data: Any) -> bool:
    """Check whether data is a numpy 2-D array."""
    return isinstance(data, np.ndarray) and len(data.shape) == 2 and data.shape[1] > 1


def _is_2d_list(data: Any) -> bool:
    """Check whether data is a 2-D list."""
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    return isinstance(data, list) and len(data) > 0 and _is_1d_list(data[0])
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def _is_2d_collection(data: Any) -> bool:
    """Check whether data is a 2-D collection."""
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    return _is_numpy_2d_array(data) or _is_2d_list(data) or isinstance(data, pd_DataFrame)
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def _is_pyarrow_array(data: Any) -> "TypeGuard[Union[pa_Array, pa_ChunkedArray]]":
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    """Check whether data is a PyArrow array."""
    return isinstance(data, (pa_Array, pa_ChunkedArray))


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def _is_pyarrow_table(data: Any) -> bool:
    """Check whether data is a PyArrow table."""
    return isinstance(data, pa_Table)


class _ArrowCArray:
    """Simple wrapper around the C representation of an Arrow type."""

    n_chunks: int
    chunks: arrow_cffi.CData
    schema: arrow_cffi.CData

    def __init__(self, n_chunks: int, chunks: arrow_cffi.CData, schema: arrow_cffi.CData):
        self.n_chunks = n_chunks
        self.chunks = chunks
        self.schema = schema

    @property
    def chunks_ptr(self) -> int:
        """Returns the address of the pointer to the list of chunks making up the array."""
        return int(arrow_cffi.cast("uintptr_t", arrow_cffi.addressof(self.chunks[0])))

    @property
    def schema_ptr(self) -> int:
        """Returns the address of the pointer to the schema of the array."""
        return int(arrow_cffi.cast("uintptr_t", self.schema))


def _export_arrow_to_c(data: pa_Table) -> _ArrowCArray:
    """Export an Arrow type to its C representation."""
    # Obtain objects to export
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    if isinstance(data, pa_Array):
        export_objects = [data]
    elif isinstance(data, pa_ChunkedArray):
        export_objects = data.chunks
    elif isinstance(data, pa_Table):
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        export_objects = data.to_batches()
    else:
        raise ValueError(f"data of type '{type(data)}' cannot be exported to Arrow")

    # Prepare export
    chunks = arrow_cffi.new("struct ArrowArray[]", len(export_objects))
    schema = arrow_cffi.new("struct ArrowSchema*")

    # Export all objects
    for i, obj in enumerate(export_objects):
        chunk_ptr = int(arrow_cffi.cast("uintptr_t", arrow_cffi.addressof(chunks[i])))
        if i == 0:
            schema_ptr = int(arrow_cffi.cast("uintptr_t", schema))
            obj._export_to_c(chunk_ptr, schema_ptr)
        else:
            obj._export_to_c(chunk_ptr)

    return _ArrowCArray(len(chunks), chunks, schema)


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def _data_to_2d_numpy(
    data: Any,
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    dtype: "np.typing.DTypeLike",
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    name: str,
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) -> np.ndarray:
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    """Convert data to numpy 2-D array."""
    if _is_numpy_2d_array(data):
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        return _cast_numpy_array_to_dtype(data, dtype)
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    if _is_2d_list(data):
        return np.array(data, dtype=dtype)
    if isinstance(data, pd_DataFrame):
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        _check_for_bad_pandas_dtypes(data.dtypes)
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        return _cast_numpy_array_to_dtype(data.values, dtype)
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    raise TypeError(
        f"Wrong type({type(data).__name__}) for {name}.\n"
        "It should be list of lists, numpy 2-D array or pandas DataFrame"
    )
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def _cfloat32_array_to_numpy(*, cptr: "ctypes._Pointer", length: int) -> np.ndarray:
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    """Convert a ctypes float pointer array to a numpy array."""
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    if isinstance(cptr, ctypes.POINTER(ctypes.c_float)):
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        return np.ctypeslib.as_array(cptr, shape=(length,)).copy()
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    else:
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        raise RuntimeError("Expected float pointer")
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def _cfloat64_array_to_numpy(*, cptr: "ctypes._Pointer", length: int) -> np.ndarray:
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    """Convert a ctypes double pointer array to a numpy array."""
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    if isinstance(cptr, ctypes.POINTER(ctypes.c_double)):
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        return np.ctypeslib.as_array(cptr, shape=(length,)).copy()
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    else:
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        raise RuntimeError("Expected double pointer")
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def _cint32_array_to_numpy(*, cptr: "ctypes._Pointer", length: int) -> np.ndarray:
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    """Convert a ctypes int pointer array to a numpy array."""
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    if isinstance(cptr, ctypes.POINTER(ctypes.c_int32)):
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        return np.ctypeslib.as_array(cptr, shape=(length,)).copy()
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    else:
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        raise RuntimeError("Expected int32 pointer")
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def _cint64_array_to_numpy(*, cptr: "ctypes._Pointer", length: int) -> np.ndarray:
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    """Convert a ctypes int pointer array to a numpy array."""
    if isinstance(cptr, ctypes.POINTER(ctypes.c_int64)):
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        return np.ctypeslib.as_array(cptr, shape=(length,)).copy()
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    else:
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        raise RuntimeError("Expected int64 pointer")
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def _c_str(string: str) -> ctypes.c_char_p:
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    """Convert a Python string to C string."""
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    return ctypes.c_char_p(string.encode("utf-8"))
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def _c_array(ctype: type, values: List[Any]) -> ctypes.Array:
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    """Convert a Python array to C array."""
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    return (ctype * len(values))(*values)  # type: ignore[operator]
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def _json_default_with_numpy(obj: Any) -> Any:
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    """Convert numpy classes to JSON serializable objects."""
    if isinstance(obj, (np.integer, np.floating, np.bool_)):
        return obj.item()
    elif isinstance(obj, np.ndarray):
        return obj.tolist()
    else:
        return obj


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def _to_string(x: Union[int, float, str, List]) -> str:
    if isinstance(x, list):
        val_list = ",".join(str(val) for val in x)
        return f"[{val_list}]"
    else:
        return str(x)


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def _param_dict_to_str(data: Optional[Dict[str, Any]]) -> str:
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    """Convert Python dictionary to string, which is passed to C API."""
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    if data is None or not data:
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        return ""
    pairs = []
    for key, val in data.items():
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        if isinstance(val, (list, tuple, set)) or _is_numpy_1d_array(val):
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            pairs.append(f"{key}={','.join(map(_to_string, val))}")
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        elif isinstance(val, (str, Path, _NUMERIC_TYPES)) or _is_numeric(val):
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            pairs.append(f"{key}={val}")
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        elif val is not None:
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            raise TypeError(f"Unknown type of parameter:{key}, got:{type(val).__name__}")
    return " ".join(pairs)
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class _TempFile:
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    """Proxy class to workaround errors on Windows."""

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    def __enter__(self) -> "_TempFile":
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        with NamedTemporaryFile(prefix="lightgbm_tmp_", delete=True) as f:
            self.name = f.name
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            self.path = Path(self.name)
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        return self
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    def __exit__(self, exc_type: Any, exc_val: Any, exc_tb: Any) -> None:
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        if self.path.is_file():
            self.path.unlink()
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# DeprecationWarning is not shown by default, so let's create our own with higher level
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# ref: https://peps.python.org/pep-0565/#additional-use-case-for-futurewarning
class LGBMDeprecationWarning(FutureWarning):
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    """Custom deprecation warning."""

    pass


class _ConfigAliases:
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    # lazy evaluation to allow import without dynamic library, e.g., for docs generation
    aliases = None

    @staticmethod
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    def _get_all_param_aliases() -> Dict[str, List[str]]:
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        buffer_len = 1 << 20
        tmp_out_len = ctypes.c_int64(0)
        string_buffer = ctypes.create_string_buffer(buffer_len)
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        ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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        _safe_call(
            _LIB.LGBM_DumpParamAliases(
                ctypes.c_int64(buffer_len),
                ctypes.byref(tmp_out_len),
                ptr_string_buffer,
            )
        )
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        actual_len = tmp_out_len.value
        # if buffer length is not long enough, re-allocate a buffer
        if actual_len > buffer_len:
            string_buffer = ctypes.create_string_buffer(actual_len)
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            ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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            _safe_call(
                _LIB.LGBM_DumpParamAliases(
                    ctypes.c_int64(actual_len),
                    ctypes.byref(tmp_out_len),
                    ptr_string_buffer,
                )
            )
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        return json.loads(
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            string_buffer.value.decode("utf-8"), object_hook=lambda obj: {k: [k] + v for k, v in obj.items()}
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        )
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    @classmethod
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    def get(cls, *args: str) -> Set[str]:
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        if cls.aliases is None:
            cls.aliases = cls._get_all_param_aliases()
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        ret = set()
        for i in args:
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            ret.update(cls.get_sorted(i))
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        return ret

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    @classmethod
    def get_sorted(cls, name: str) -> List[str]:
        if cls.aliases is None:
            cls.aliases = cls._get_all_param_aliases()
        return cls.aliases.get(name, [name])

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    @classmethod
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    def get_by_alias(cls, *args: str) -> Set[str]:
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        if cls.aliases is None:
            cls.aliases = cls._get_all_param_aliases()
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        ret = set(args)
        for arg in args:
            for aliases in cls.aliases.values():
                if arg in aliases:
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                    ret.update(aliases)
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                    break
        return ret

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def _choose_param_value(main_param_name: str, params: Dict[str, Any], default_value: Any) -> Dict[str, Any]:
    """Get a single parameter value, accounting for aliases.

    Parameters
    ----------
    main_param_name : str
        Name of the main parameter to get a value for. One of the keys of ``_ConfigAliases``.
    params : dict
        Dictionary of LightGBM parameters.
    default_value : Any
        Default value to use for the parameter, if none is found in ``params``.

    Returns
    -------
    params : dict
        A ``params`` dict with exactly one value for ``main_param_name``, and all aliases ``main_param_name`` removed.
        If both ``main_param_name`` and one or more aliases for it are found, the value of ``main_param_name`` will be preferred.
    """
    # avoid side effects on passed-in parameters
    params = deepcopy(params)

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    aliases = _ConfigAliases.get_sorted(main_param_name)
    aliases = [a for a in aliases if a != main_param_name]
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    # if main_param_name was provided, keep that value and remove all aliases
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    if main_param_name in params.keys():
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        for param in aliases:
            params.pop(param, None)
        return params
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    # if main param name was not found, search for an alias
    for param in aliases:
        if param in params.keys():
            params[main_param_name] = params[param]
            break
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    if main_param_name in params.keys():
        for param in aliases:
            params.pop(param, None)
        return params

    # neither of main_param_name, aliases were found
    params[main_param_name] = default_value
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    return params


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_MAX_INT32 = (1 << 31) - 1
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"""Macro definition of data type in C API of LightGBM"""
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_C_API_DTYPE_FLOAT32 = 0
_C_API_DTYPE_FLOAT64 = 1
_C_API_DTYPE_INT32 = 2
_C_API_DTYPE_INT64 = 3
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"""Macro definition of data order in matrix"""
_C_API_IS_COL_MAJOR = 0
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_C_API_IS_ROW_MAJOR = 1
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"""Macro definition of prediction type in C API of LightGBM"""
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_C_API_PREDICT_NORMAL = 0
_C_API_PREDICT_RAW_SCORE = 1
_C_API_PREDICT_LEAF_INDEX = 2
_C_API_PREDICT_CONTRIB = 3
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"""Macro definition of sparse matrix type"""
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_C_API_MATRIX_TYPE_CSR = 0
_C_API_MATRIX_TYPE_CSC = 1
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"""Macro definition of feature importance type"""
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_C_API_FEATURE_IMPORTANCE_SPLIT = 0
_C_API_FEATURE_IMPORTANCE_GAIN = 1
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"""Data type of data field"""
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_FIELD_TYPE_MAPPER = {
    "label": _C_API_DTYPE_FLOAT32,
    "weight": _C_API_DTYPE_FLOAT32,
    "init_score": _C_API_DTYPE_FLOAT64,
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    "group": _C_API_DTYPE_INT32,
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    "position": _C_API_DTYPE_INT32,
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}
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"""String name to int feature importance type mapper"""
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_FEATURE_IMPORTANCE_TYPE_MAPPER = {
    "split": _C_API_FEATURE_IMPORTANCE_SPLIT,
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    "gain": _C_API_FEATURE_IMPORTANCE_GAIN,
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}
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def _convert_from_sliced_object(data: np.ndarray) -> np.ndarray:
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    """Fix the memory of multi-dimensional sliced object."""
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    if isinstance(data, np.ndarray) and isinstance(data.base, np.ndarray):
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        if not data.flags.c_contiguous:
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            _log_warning(
                "Usage of np.ndarray subset (sliced data) is not recommended "
                "due to it will double the peak memory cost in LightGBM."
            )
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            return np.copy(data)
    return data


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def _c_float_array(data: np.ndarray) -> Tuple[_ctypes_float_ptr, int, np.ndarray]:
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    """Get pointer of float numpy array / list."""
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    if _is_1d_list(data):
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        data = np.asarray(data)
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    if _is_numpy_1d_array(data):
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        data = _convert_from_sliced_object(data)
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        assert data.flags.c_contiguous
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        ptr_data: _ctypes_float_ptr
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        if data.dtype == np.float32:
            ptr_data = data.ctypes.data_as(ctypes.POINTER(ctypes.c_float))
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            type_data = _C_API_DTYPE_FLOAT32
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        elif data.dtype == np.float64:
            ptr_data = data.ctypes.data_as(ctypes.POINTER(ctypes.c_double))
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            type_data = _C_API_DTYPE_FLOAT64
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        else:
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            raise TypeError(f"Expected np.float32 or np.float64, met type({data.dtype})")
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    else:
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        raise TypeError(f"Unknown type({type(data).__name__})")
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    return (ptr_data, type_data, data)  # return `data` to avoid the temporary copy is freed
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def _c_int_array(data: np.ndarray) -> Tuple[_ctypes_int_ptr, int, np.ndarray]:
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    """Get pointer of int numpy array / list."""
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    if _is_1d_list(data):
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        data = np.asarray(data)
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    if _is_numpy_1d_array(data):
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        data = _convert_from_sliced_object(data)
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        assert data.flags.c_contiguous
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        ptr_data: _ctypes_int_ptr
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        if data.dtype == np.int32:
            ptr_data = data.ctypes.data_as(ctypes.POINTER(ctypes.c_int32))
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            type_data = _C_API_DTYPE_INT32
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        elif data.dtype == np.int64:
            ptr_data = data.ctypes.data_as(ctypes.POINTER(ctypes.c_int64))
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            type_data = _C_API_DTYPE_INT64
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        else:
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            raise TypeError(f"Expected np.int32 or np.int64, met type({data.dtype})")
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    else:
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        raise TypeError(f"Unknown type({type(data).__name__})")
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    return (ptr_data, type_data, data)  # return `data` to avoid the temporary copy is freed
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def _is_allowed_numpy_dtype(dtype: type) -> bool:
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    float128 = getattr(np, "float128", type(None))
    return issubclass(dtype, (np.integer, np.floating, np.bool_)) and not issubclass(dtype, (np.timedelta64, float128))
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def _check_for_bad_pandas_dtypes(pandas_dtypes_series: pd_Series) -> None:
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    bad_pandas_dtypes = [
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        f"{column_name}: {pandas_dtype}"
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        for column_name, pandas_dtype in pandas_dtypes_series.items()
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        if not _is_allowed_numpy_dtype(pandas_dtype.type)
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    ]
    if bad_pandas_dtypes:
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        raise ValueError(
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            f"pandas dtypes must be int, float or bool.\nFields with bad pandas dtypes: {', '.join(bad_pandas_dtypes)}"
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        )
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def _pandas_to_numpy(
    data: pd_DataFrame,
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    target_dtype: "np.typing.DTypeLike",
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) -> np.ndarray:
    _check_for_bad_pandas_dtypes(data.dtypes)
    try:
        # most common case (no nullable dtypes)
        return data.to_numpy(dtype=target_dtype, copy=False)
    except TypeError:
        # 1.0 <= pd version < 1.1 and nullable dtypes, least common case
        # raises error because array is casted to type(pd.NA) and there's no na_value argument
        return data.astype(target_dtype, copy=False).values
    except ValueError:
        # data has nullable dtypes, but we can specify na_value argument and copy will be made
        return data.to_numpy(dtype=target_dtype, na_value=np.nan)


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def _data_from_pandas(
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    data: pd_DataFrame,
    feature_name: _LGBM_FeatureNameConfiguration,
    categorical_feature: _LGBM_CategoricalFeatureConfiguration,
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    pandas_categorical: Optional[List[List]],
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) -> Tuple[np.ndarray, List[str], Union[List[str], List[int]], List[List]]:
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    if len(data.shape) != 2 or data.shape[0] < 1:
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        raise ValueError("Input data must be 2 dimensional and non empty.")
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    # take shallow copy in case we modify categorical columns
    # whole column modifications don't change the original df
    data = data.copy(deep=False)

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    # determine feature names
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    if feature_name == "auto":
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        feature_name = [str(col) for col in data.columns]

    # determine categorical features
    cat_cols = [col for col, dtype in zip(data.columns, data.dtypes) if isinstance(dtype, pd_CategoricalDtype)]
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    cat_cols_not_ordered: List[str] = [col for col in cat_cols if not data[col].cat.ordered]
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    if pandas_categorical is None:  # train dataset
        pandas_categorical = [list(data[col].cat.categories) for col in cat_cols]
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    else:
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        if len(cat_cols) != len(pandas_categorical):
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            raise ValueError("train and valid dataset categorical_feature do not match.")
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        for col, category in zip(cat_cols, pandas_categorical):
            if list(data[col].cat.categories) != list(category):
                data[col] = data[col].cat.set_categories(category)
    if len(cat_cols):  # cat_cols is list
        data[cat_cols] = data[cat_cols].apply(lambda x: x.cat.codes).replace({-1: np.nan})
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    # use cat cols from DataFrame
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    if categorical_feature == "auto":
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        categorical_feature = cat_cols_not_ordered

    df_dtypes = [dtype.type for dtype in data.dtypes]
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    # so that the target dtype considers floats
    df_dtypes.append(np.float32)
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    target_dtype = np.result_type(*df_dtypes)
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    return (
        _pandas_to_numpy(data, target_dtype=target_dtype),
        feature_name,
        categorical_feature,
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        pandas_categorical,
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    )
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def _dump_pandas_categorical(
    pandas_categorical: Optional[List[List]],
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    file_name: Optional[Union[str, Path]] = None,
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) -> str:
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    categorical_json = json.dumps(pandas_categorical, default=_json_default_with_numpy)
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    pandas_str = f"\npandas_categorical:{categorical_json}\n"
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    if file_name is not None:
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        with open(file_name, "a") as f:
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            f.write(pandas_str)
    return pandas_str


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def _load_pandas_categorical(
    file_name: Optional[Union[str, Path]] = None,
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    model_str: Optional[str] = None,
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) -> Optional[List[List]]:
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    pandas_key = "pandas_categorical:"
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    offset = -len(pandas_key)
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    if file_name is not None:
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        max_offset = -getsize(file_name)
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        with open(file_name, "rb") as f:
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            while True:
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                offset = max(offset, max_offset)
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                f.seek(offset, SEEK_END)
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                lines = f.readlines()
                if len(lines) >= 2:
                    break
                offset *= 2
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        last_line = lines[-1].decode("utf-8").strip()
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        if not last_line.startswith(pandas_key):
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            last_line = lines[-2].decode("utf-8").strip()
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    elif model_str is not None:
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        idx = model_str.rfind("\n", 0, offset)
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        last_line = model_str[idx:].strip()
    if last_line.startswith(pandas_key):
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        return json.loads(last_line[len(pandas_key) :])
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    else:
        return None
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class Sequence(abc.ABC):
    """
    Generic data access interface.

    Object should support the following operations:

    .. code-block::

        # Get total row number.
        >>> len(seq)
        # Random access by row index. Used for data sampling.
        >>> seq[10]
        # Range data access. Used to read data in batch when constructing Dataset.
        >>> seq[0:100]
        # Optionally specify batch_size to control range data read size.
        >>> seq.batch_size

    - With random access, **data sampling does not need to go through all data**.
    - With range data access, there's **no need to read all data into memory thus reduce memory usage**.

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    .. versionadded:: 3.3.0

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    Attributes
    ----------
    batch_size : int
        Default size of a batch.
    """

    batch_size = 4096  # Defaults to read 4K rows in each batch.

    @abc.abstractmethod
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    def __getitem__(self, idx: Union[int, slice, List[int]]) -> np.ndarray:
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        """Return data for given row index.

        A basic implementation should look like this:

        .. code-block:: python

            if isinstance(idx, numbers.Integral):
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                return self._get_one_line(idx)
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            elif isinstance(idx, slice):
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                return np.stack([self._get_one_line(i) for i in range(idx.start, idx.stop)])
            elif isinstance(idx, list):
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                # Only required if using ``Dataset.subset()``.
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                return np.array([self._get_one_line(i) for i in idx])
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            else:
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                raise TypeError(f"Sequence index must be integer, slice or list, got {type(idx).__name__}")
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        Parameters
        ----------
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        idx : int, slice[int], list[int]
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            Item index.

        Returns
        -------
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        result : numpy 1-D array or numpy 2-D array
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            1-D array if idx is int, 2-D array if idx is slice or list.
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        """
        raise NotImplementedError("Sub-classes of lightgbm.Sequence must implement __getitem__()")

    @abc.abstractmethod
    def __len__(self) -> int:
        """Return row count of this sequence."""
        raise NotImplementedError("Sub-classes of lightgbm.Sequence must implement __len__()")


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class _InnerPredictor:
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    """_InnerPredictor of LightGBM.

    Not exposed to user.
    Used only for prediction, usually used for continued training.

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    .. note::

        Can be converted from Booster, but cannot be converted to Booster.
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    """
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    def __init__(
        self,
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        booster_handle: _BoosterHandle,
        pandas_categorical: Optional[List[List]],
        pred_parameter: Dict[str, Any],
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        manage_handle: bool,
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    ):
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        """Initialize the _InnerPredictor.
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        Parameters
        ----------
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        booster_handle : object
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            Handle of Booster.
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        pandas_categorical : list of list, or None
            If provided, list of categories for ``pandas`` categorical columns.
            Where the ``i``th element of the list contains the categories for the ``i``th categorical feature.
        pred_parameter : dict
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            Other parameters for the prediction.
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        manage_handle : bool
            If ``True``, free the corresponding Booster on the C++ side when this Python object is deleted.
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        """
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        self._handle = booster_handle
        self.__is_manage_handle = manage_handle
        self.pandas_categorical = pandas_categorical
        self.pred_parameter = _param_dict_to_str(pred_parameter)

        out_num_class = ctypes.c_int(0)
        _safe_call(
            _LIB.LGBM_BoosterGetNumClasses(
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                self._handle,
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                ctypes.byref(out_num_class),
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            )
        )
        self.num_class = out_num_class.value
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    @classmethod
    def from_booster(
        cls,
        booster: "Booster",
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        pred_parameter: Dict[str, Any],
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    ) -> "_InnerPredictor":
        """Initialize an ``_InnerPredictor`` from a ``Booster``.

        Parameters
        ----------
        booster : Booster
            Booster.
        pred_parameter : dict
            Other parameters for the prediction.
        """
        out_cur_iter = ctypes.c_int(0)
        _safe_call(
            _LIB.LGBM_BoosterGetCurrentIteration(
                booster._handle,
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                ctypes.byref(out_cur_iter),
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            )
        )
        return cls(
            booster_handle=booster._handle,
            pandas_categorical=booster.pandas_categorical,
            pred_parameter=pred_parameter,
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            manage_handle=False,
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        )

    @classmethod
    def from_model_file(
        cls,
        model_file: Union[str, Path],
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        pred_parameter: Dict[str, Any],
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    ) -> "_InnerPredictor":
        """Initialize an ``_InnerPredictor`` from a text file containing a LightGBM model.

        Parameters
        ----------
        model_file : str or pathlib.Path
            Path to the model file.
        pred_parameter : dict
            Other parameters for the prediction.
        """
        booster_handle = ctypes.c_void_p()
        out_num_iterations = ctypes.c_int(0)
        _safe_call(
            _LIB.LGBM_BoosterCreateFromModelfile(
                _c_str(str(model_file)),
                ctypes.byref(out_num_iterations),
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                ctypes.byref(booster_handle),
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            )
        )
        return cls(
            booster_handle=booster_handle,
            pandas_categorical=_load_pandas_categorical(file_name=model_file),
            pred_parameter=pred_parameter,
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            manage_handle=True,
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        )
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    def __del__(self) -> None:
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        try:
            if self.__is_manage_handle:
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                _safe_call(_LIB.LGBM_BoosterFree(self._handle))
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        except AttributeError:
            pass
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    def __getstate__(self) -> Dict[str, Any]:
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        this = self.__dict__.copy()
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        this.pop("handle", None)
        this.pop("_handle", None)
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        return this

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    def predict(
        self,
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        data: _LGBM_PredictDataType,
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        start_iteration: int = 0,
        num_iteration: int = -1,
        raw_score: bool = False,
        pred_leaf: bool = False,
        pred_contrib: bool = False,
        data_has_header: bool = False,
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        validate_features: bool = False,
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    ) -> Union[np.ndarray, scipy.sparse.spmatrix, List[scipy.sparse.spmatrix]]:
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        """Predict logic.
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        Parameters
        ----------
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        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse or pyarrow Table
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            Data source for prediction.
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            If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM).
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        start_iteration : int, optional (default=0)
            Start index of the iteration to predict.
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        num_iteration : int, optional (default=-1)
            Iteration used for prediction.
        raw_score : bool, optional (default=False)
            Whether to predict raw scores.
        pred_leaf : bool, optional (default=False)
            Whether to predict leaf index.
        pred_contrib : bool, optional (default=False)
            Whether to predict feature contributions.
        data_has_header : bool, optional (default=False)
            Whether data has header.
            Used only for txt data.
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        validate_features : bool, optional (default=False)
            If True, ensure that the features used to predict match the ones used to train.
            Used only if data is pandas DataFrame.
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            .. versionadded:: 4.0.0

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        Returns
        -------
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        result : numpy array, scipy.sparse or list of scipy.sparse
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            Prediction result.
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            Can be sparse or a list of sparse objects (each element represents predictions for one class) for feature contributions (when ``pred_contrib=True``).
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        """
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        if isinstance(data, Dataset):
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            raise TypeError("Cannot use Dataset instance for prediction, please use raw data instead")
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        if isinstance(data, pd_DataFrame) and validate_features:
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            data_names = [str(x) for x in data.columns]
            ptr_names = (ctypes.c_char_p * len(data_names))()
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            ptr_names[:] = [x.encode("utf-8") for x in data_names]
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            _safe_call(
                _LIB.LGBM_BoosterValidateFeatureNames(
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                    self._handle,
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                    ptr_names,
                    ctypes.c_int(len(data_names)),
                )
            )
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        if isinstance(data, pd_DataFrame):
            data = _data_from_pandas(
                data=data,
                feature_name="auto",
                categorical_feature="auto",
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                pandas_categorical=self.pandas_categorical,
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            )[0]

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        predict_type = _C_API_PREDICT_NORMAL
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        if raw_score:
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            predict_type = _C_API_PREDICT_RAW_SCORE
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        if pred_leaf:
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            predict_type = _C_API_PREDICT_LEAF_INDEX
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        if pred_contrib:
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            predict_type = _C_API_PREDICT_CONTRIB
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        if isinstance(data, (str, Path)):
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            with _TempFile() as f:
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                _safe_call(
                    _LIB.LGBM_BoosterPredictForFile(
                        self._handle,
                        _c_str(str(data)),
                        ctypes.c_int(data_has_header),
                        ctypes.c_int(predict_type),
                        ctypes.c_int(start_iteration),
                        ctypes.c_int(num_iteration),
                        _c_str(self.pred_parameter),
                        _c_str(f.name),
                    )
                )
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                preds = np.loadtxt(f.name, dtype=np.float64)
                nrow = preds.shape[0]
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        elif isinstance(data, scipy.sparse.csr_matrix):
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            preds, nrow = self.__pred_for_csr(
                csr=data,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        elif isinstance(data, scipy.sparse.csc_matrix):
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            preds, nrow = self.__pred_for_csc(
                csc=data,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        elif isinstance(data, np.ndarray):
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            preds, nrow = self.__pred_for_np2d(
                mat=data,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        elif _is_pyarrow_table(data):
            preds, nrow = self.__pred_for_pyarrow_table(
                table=data,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        elif isinstance(data, list):
            try:
                data = np.array(data)
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            except BaseException as err:
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                raise ValueError("Cannot convert data list to numpy array.") from err
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            preds, nrow = self.__pred_for_np2d(
                mat=data,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        else:
            try:
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                _log_warning("Converting data to scipy sparse matrix.")
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                csr = scipy.sparse.csr_matrix(data)
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            except BaseException as err:
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                raise TypeError(f"Cannot predict data for type {type(data).__name__}") from err
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            preds, nrow = self.__pred_for_csr(
                csr=csr,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        if pred_leaf:
            preds = preds.astype(np.int32)
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        is_sparse = isinstance(preds, (list, scipy.sparse.spmatrix))
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        if not is_sparse and (preds.size != nrow or pred_leaf or pred_contrib):
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            if preds.size % nrow == 0:
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                preds = preds.reshape(nrow, -1)
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            else:
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                raise ValueError(f"Length of predict result ({preds.size}) cannot be divide nrow ({nrow})")
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        return preds

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    def __get_num_preds(
        self,
        start_iteration: int,
        num_iteration: int,
        nrow: int,
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        predict_type: int,
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    ) -> int:
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        """Get size of prediction result."""
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        if nrow > _MAX_INT32:
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            raise LightGBMError(
                "LightGBM cannot perform prediction for data "
                f"with number of rows greater than MAX_INT32 ({_MAX_INT32}).\n"
                "You can split your data into chunks "
                "and then concatenate predictions for them"
            )
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        n_preds = ctypes.c_int64(0)
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        _safe_call(
            _LIB.LGBM_BoosterCalcNumPredict(
                self._handle,
                ctypes.c_int(nrow),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                ctypes.byref(n_preds),
            )
        )
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        return n_preds.value
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    def __inner_predict_np2d(
        self,
        mat: np.ndarray,
        start_iteration: int,
        num_iteration: int,
        predict_type: int,
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        preds: Optional[np.ndarray],
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    ) -> Tuple[np.ndarray, int]:
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        data, layout = _np2d_to_np1d(mat)
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        ptr_data, type_ptr_data, _ = _c_float_array(data)
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        n_preds = self.__get_num_preds(
            start_iteration=start_iteration,
            num_iteration=num_iteration,
            nrow=mat.shape[0],
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            predict_type=predict_type,
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        )
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        if preds is None:
            preds = np.empty(n_preds, dtype=np.float64)
        elif len(preds.shape) != 1 or len(preds) != n_preds:
            raise ValueError("Wrong length of pre-allocated predict array")
        out_num_preds = ctypes.c_int64(0)
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        _safe_call(
            _LIB.LGBM_BoosterPredictForMat(
                self._handle,
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int32(mat.shape[0]),
                ctypes.c_int32(mat.shape[1]),
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                ctypes.c_int(layout),
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                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.byref(out_num_preds),
                preds.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
            )
        )
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        if n_preds != out_num_preds.value:
            raise ValueError("Wrong length for predict results")
        return preds, mat.shape[0]

    def __pred_for_np2d(
        self,
        mat: np.ndarray,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[np.ndarray, int]:
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        """Predict for a 2-D numpy matrix."""
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        if len(mat.shape) != 2:
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            raise ValueError("Input numpy.ndarray or list must be 2 dimensional")
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        nrow = mat.shape[0]
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        if nrow > _MAX_INT32:
            sections = np.arange(start=_MAX_INT32, stop=nrow, step=_MAX_INT32)
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            # __get_num_preds() cannot work with nrow > MAX_INT32, so calculate overall number of predictions piecemeal
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            n_preds = [
                self.__get_num_preds(start_iteration, num_iteration, i, predict_type)
                for i in np.diff([0] + list(sections) + [nrow])
            ]
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            n_preds_sections = np.array([0] + n_preds, dtype=np.intp).cumsum()
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            preds = np.empty(sum(n_preds), dtype=np.float64)
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            for chunk, (start_idx_pred, end_idx_pred) in zip(
                np.array_split(mat, sections), zip(n_preds_sections, n_preds_sections[1:])
            ):
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                # avoid memory consumption by arrays concatenation operations
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                self.__inner_predict_np2d(
                    mat=chunk,
                    start_iteration=start_iteration,
                    num_iteration=num_iteration,
                    predict_type=predict_type,
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                    preds=preds[start_idx_pred:end_idx_pred],
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                )
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            return preds, nrow
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        else:
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            return self.__inner_predict_np2d(
                mat=mat,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
                predict_type=predict_type,
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                preds=None,
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            )
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    def __create_sparse_native(
        self,
        cs: Union[scipy.sparse.csc_matrix, scipy.sparse.csr_matrix],
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        out_shape: np.ndarray,
        out_ptr_indptr: "ctypes._Pointer",
        out_ptr_indices: "ctypes._Pointer",
        out_ptr_data: "ctypes._Pointer",
        indptr_type: int,
        data_type: int,
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        is_csr: bool,
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    ) -> Union[List[scipy.sparse.csc_matrix], List[scipy.sparse.csr_matrix]]:
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        # create numpy array from output arrays
        data_indices_len = out_shape[0]
        indptr_len = out_shape[1]
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        if indptr_type == _C_API_DTYPE_INT32:
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            out_indptr = _cint32_array_to_numpy(cptr=out_ptr_indptr, length=indptr_len)
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        elif indptr_type == _C_API_DTYPE_INT64:
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            out_indptr = _cint64_array_to_numpy(cptr=out_ptr_indptr, length=indptr_len)
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        else:
            raise TypeError("Expected int32 or int64 type for indptr")
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        if data_type == _C_API_DTYPE_FLOAT32:
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            out_data = _cfloat32_array_to_numpy(cptr=out_ptr_data, length=data_indices_len)
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        elif data_type == _C_API_DTYPE_FLOAT64:
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            out_data = _cfloat64_array_to_numpy(cptr=out_ptr_data, length=data_indices_len)
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        else:
            raise TypeError("Expected float32 or float64 type for data")
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        out_indices = _cint32_array_to_numpy(cptr=out_ptr_indices, length=data_indices_len)
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        # break up indptr based on number of rows (note more than one matrix in multiclass case)
        per_class_indptr_shape = cs.indptr.shape[0]
        # for CSC there is extra column added
        if not is_csr:
            per_class_indptr_shape += 1
        out_indptr_arrays = np.split(out_indptr, out_indptr.shape[0] / per_class_indptr_shape)
        # reformat output into a csr or csc matrix or list of csr or csc matrices
        cs_output_matrices = []
        offset = 0
        for cs_indptr in out_indptr_arrays:
            matrix_indptr_len = cs_indptr[cs_indptr.shape[0] - 1]
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            cs_indices = out_indices[offset + cs_indptr[0] : offset + matrix_indptr_len]
            cs_data = out_data[offset + cs_indptr[0] : offset + matrix_indptr_len]
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            offset += matrix_indptr_len
            # same shape as input csr or csc matrix except extra column for expected value
            cs_shape = [cs.shape[0], cs.shape[1] + 1]
            # note: make sure we copy data as it will be deallocated next
            if is_csr:
                cs_output_matrices.append(scipy.sparse.csr_matrix((cs_data, cs_indices, cs_indptr), cs_shape))
            else:
                cs_output_matrices.append(scipy.sparse.csc_matrix((cs_data, cs_indices, cs_indptr), cs_shape))
        # free the temporary native indptr, indices, and data
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        _safe_call(
            _LIB.LGBM_BoosterFreePredictSparse(
                out_ptr_indptr,
                out_ptr_indices,
                out_ptr_data,
                ctypes.c_int(indptr_type),
                ctypes.c_int(data_type),
            )
        )
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        if len(cs_output_matrices) == 1:
            return cs_output_matrices[0]
        return cs_output_matrices

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    def __inner_predict_csr(
        self,
        csr: scipy.sparse.csr_matrix,
        start_iteration: int,
        num_iteration: int,
        predict_type: int,
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        preds: Optional[np.ndarray],
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    ) -> Tuple[np.ndarray, int]:
        nrow = len(csr.indptr) - 1
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        n_preds = self.__get_num_preds(
            start_iteration=start_iteration,
            num_iteration=num_iteration,
            nrow=nrow,
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            predict_type=predict_type,
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        )
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        if preds is None:
            preds = np.empty(n_preds, dtype=np.float64)
        elif len(preds.shape) != 1 or len(preds) != n_preds:
            raise ValueError("Wrong length of pre-allocated predict array")
        out_num_preds = ctypes.c_int64(0)
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        ptr_indptr, type_ptr_indptr, _ = _c_int_array(csr.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csr.data)
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        assert csr.shape[1] <= _MAX_INT32
        csr_indices = csr.indices.astype(np.int32, copy=False)

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        _safe_call(
            _LIB.LGBM_BoosterPredictForCSR(
                self._handle,
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csr_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csr.indptr)),
                ctypes.c_int64(len(csr.data)),
                ctypes.c_int64(csr.shape[1]),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.byref(out_num_preds),
                preds.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
            )
        )
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        if n_preds != out_num_preds.value:
            raise ValueError("Wrong length for predict results")
        return preds, nrow

    def __inner_predict_csr_sparse(
        self,
        csr: scipy.sparse.csr_matrix,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[Union[List[scipy.sparse.csc_matrix], List[scipy.sparse.csr_matrix]], int]:
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        ptr_indptr, type_ptr_indptr, __ = _c_int_array(csr.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csr.data)
        csr_indices = csr.indices.astype(np.int32, copy=False)
        matrix_type = _C_API_MATRIX_TYPE_CSR
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        out_ptr_indptr: _ctypes_int_ptr
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        if type_ptr_indptr == _C_API_DTYPE_INT32:
            out_ptr_indptr = ctypes.POINTER(ctypes.c_int32)()
        else:
            out_ptr_indptr = ctypes.POINTER(ctypes.c_int64)()
        out_ptr_indices = ctypes.POINTER(ctypes.c_int32)()
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        out_ptr_data: _ctypes_float_ptr
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        if type_ptr_data == _C_API_DTYPE_FLOAT32:
            out_ptr_data = ctypes.POINTER(ctypes.c_float)()
        else:
            out_ptr_data = ctypes.POINTER(ctypes.c_double)()
        out_shape = np.empty(2, dtype=np.int64)
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        _safe_call(
            _LIB.LGBM_BoosterPredictSparseOutput(
                self._handle,
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csr_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csr.indptr)),
                ctypes.c_int64(len(csr.data)),
                ctypes.c_int64(csr.shape[1]),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.c_int(matrix_type),
                out_shape.ctypes.data_as(ctypes.POINTER(ctypes.c_int64)),
                ctypes.byref(out_ptr_indptr),
                ctypes.byref(out_ptr_indices),
                ctypes.byref(out_ptr_data),
            )
        )
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        matrices = self.__create_sparse_native(
            cs=csr,
            out_shape=out_shape,
            out_ptr_indptr=out_ptr_indptr,
            out_ptr_indices=out_ptr_indices,
            out_ptr_data=out_ptr_data,
            indptr_type=type_ptr_indptr,
            data_type=type_ptr_data,
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            is_csr=True,
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        )
        nrow = len(csr.indptr) - 1
        return matrices, nrow

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    def __pred_for_csr(
        self,
        csr: scipy.sparse.csr_matrix,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[np.ndarray, int]:
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        """Predict for a CSR data."""
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        if predict_type == _C_API_PREDICT_CONTRIB:
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            return self.__inner_predict_csr_sparse(
                csr=csr,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        nrow = len(csr.indptr) - 1
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        if nrow > _MAX_INT32:
            sections = [0] + list(np.arange(start=_MAX_INT32, stop=nrow, step=_MAX_INT32)) + [nrow]
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            # __get_num_preds() cannot work with nrow > MAX_INT32, so calculate overall number of predictions piecemeal
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            n_preds = [self.__get_num_preds(start_iteration, num_iteration, i, predict_type) for i in np.diff(sections)]
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            n_preds_sections = np.array([0] + n_preds, dtype=np.intp).cumsum()
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            preds = np.empty(sum(n_preds), dtype=np.float64)
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            for (start_idx, end_idx), (start_idx_pred, end_idx_pred) in zip(
                zip(sections, sections[1:]), zip(n_preds_sections, n_preds_sections[1:])
            ):
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                # avoid memory consumption by arrays concatenation operations
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                self.__inner_predict_csr(
                    csr=csr[start_idx:end_idx],
                    start_iteration=start_iteration,
                    num_iteration=num_iteration,
                    predict_type=predict_type,
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                    preds=preds[start_idx_pred:end_idx_pred],
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                )
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            return preds, nrow
        else:
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            return self.__inner_predict_csr(
                csr=csr,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
                predict_type=predict_type,
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                preds=None,
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            )

    def __inner_predict_sparse_csc(
        self,
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        csc: scipy.sparse.csc_matrix,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[Union[List[scipy.sparse.csc_matrix], List[scipy.sparse.csr_matrix]], int]:
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        ptr_indptr, type_ptr_indptr, __ = _c_int_array(csc.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csc.data)
        csc_indices = csc.indices.astype(np.int32, copy=False)
        matrix_type = _C_API_MATRIX_TYPE_CSC
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        out_ptr_indptr: _ctypes_int_ptr
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        if type_ptr_indptr == _C_API_DTYPE_INT32:
            out_ptr_indptr = ctypes.POINTER(ctypes.c_int32)()
        else:
            out_ptr_indptr = ctypes.POINTER(ctypes.c_int64)()
        out_ptr_indices = ctypes.POINTER(ctypes.c_int32)()
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        out_ptr_data: _ctypes_float_ptr
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        if type_ptr_data == _C_API_DTYPE_FLOAT32:
            out_ptr_data = ctypes.POINTER(ctypes.c_float)()
        else:
            out_ptr_data = ctypes.POINTER(ctypes.c_double)()
        out_shape = np.empty(2, dtype=np.int64)
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        _safe_call(
            _LIB.LGBM_BoosterPredictSparseOutput(
                self._handle,
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csc_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csc.indptr)),
                ctypes.c_int64(len(csc.data)),
                ctypes.c_int64(csc.shape[0]),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.c_int(matrix_type),
                out_shape.ctypes.data_as(ctypes.POINTER(ctypes.c_int64)),
                ctypes.byref(out_ptr_indptr),
                ctypes.byref(out_ptr_indices),
                ctypes.byref(out_ptr_data),
            )
        )
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        matrices = self.__create_sparse_native(
            cs=csc,
            out_shape=out_shape,
            out_ptr_indptr=out_ptr_indptr,
            out_ptr_indices=out_ptr_indices,
            out_ptr_data=out_ptr_data,
            indptr_type=type_ptr_indptr,
            data_type=type_ptr_data,
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            is_csr=False,
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        )
        nrow = csc.shape[0]
        return matrices, nrow
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    def __pred_for_csc(
        self,
        csc: scipy.sparse.csc_matrix,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[np.ndarray, int]:
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        """Predict for a CSC data."""
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        nrow = csc.shape[0]
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        if nrow > _MAX_INT32:
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            return self.__pred_for_csr(
                csr=csc.tocsr(),
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        if predict_type == _C_API_PREDICT_CONTRIB:
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            return self.__inner_predict_sparse_csc(
                csc=csc,
                start_iteration=start_iteration,
                num_iteration=num_iteration,
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                predict_type=predict_type,
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            )
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        n_preds = self.__get_num_preds(
            start_iteration=start_iteration,
            num_iteration=num_iteration,
            nrow=nrow,
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            predict_type=predict_type,
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        )
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        preds = np.empty(n_preds, dtype=np.float64)
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        out_num_preds = ctypes.c_int64(0)

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        ptr_indptr, type_ptr_indptr, __ = _c_int_array(csc.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csc.data)
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        assert csc.shape[0] <= _MAX_INT32
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        csc_indices = csc.indices.astype(np.int32, copy=False)
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        _safe_call(
            _LIB.LGBM_BoosterPredictForCSC(
                self._handle,
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csc_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csc.indptr)),
                ctypes.c_int64(len(csc.data)),
                ctypes.c_int64(csc.shape[0]),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.byref(out_num_preds),
                preds.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
            )
        )
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        if n_preds != out_num_preds.value:
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            raise ValueError("Wrong length for predict results")
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        return preds, nrow
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    def __pred_for_pyarrow_table(
        self,
        table: pa_Table,
        start_iteration: int,
        num_iteration: int,
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        predict_type: int,
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    ) -> Tuple[np.ndarray, int]:
        """Predict for a PyArrow table."""
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        if not (PYARROW_INSTALLED and CFFI_INSTALLED):
            raise LightGBMError("Cannot predict from Arrow without 'pyarrow' and 'cffi' installed.")
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        # Check that the input is valid: we only handle numbers (for now)
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        if not all(arrow_is_integer(t) or arrow_is_floating(t) or arrow_is_boolean(t) for t in table.schema.types):
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            raise ValueError("Arrow table may only have integer or floating point datatypes")

        # Prepare prediction output array
        n_preds = self.__get_num_preds(
            start_iteration=start_iteration,
            num_iteration=num_iteration,
            nrow=table.num_rows,
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            predict_type=predict_type,
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        )
        preds = np.empty(n_preds, dtype=np.float64)
        out_num_preds = ctypes.c_int64(0)

        # Export Arrow table to C and run prediction
        c_array = _export_arrow_to_c(table)
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        _safe_call(
            _LIB.LGBM_BoosterPredictForArrow(
                self._handle,
                ctypes.c_int64(c_array.n_chunks),
                ctypes.c_void_p(c_array.chunks_ptr),
                ctypes.c_void_p(c_array.schema_ptr),
                ctypes.c_int(predict_type),
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                _c_str(self.pred_parameter),
                ctypes.byref(out_num_preds),
                preds.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
            )
        )
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        if n_preds != out_num_preds.value:
            raise ValueError("Wrong length for predict results")
        return preds, table.num_rows
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    def current_iteration(self) -> int:
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        """Get the index of the current iteration.

        Returns
        -------
        cur_iter : int
            The index of the current iteration.
        """
        out_cur_iter = ctypes.c_int(0)
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        _safe_call(
            _LIB.LGBM_BoosterGetCurrentIteration(
                self._handle,
                ctypes.byref(out_cur_iter),
            )
        )
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        return out_cur_iter.value

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class Dataset:
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    """
    Dataset in LightGBM.

    LightGBM does not train on raw data.
    It discretizes continuous features into histogram bins, tries to combine categorical features,
    and automatically handles missing and infinite values.

    This class handles that preprocessing, and holds that alternative representation of the input data.
    """
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    def __init__(
        self,
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        data: _LGBM_TrainDataType,
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        label: Optional[_LGBM_LabelType] = None,
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        reference: Optional["Dataset"] = None,
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        weight: Optional[_LGBM_WeightType] = None,
        group: Optional[_LGBM_GroupType] = None,
        init_score: Optional[_LGBM_InitScoreType] = None,
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        feature_name: _LGBM_FeatureNameConfiguration = "auto",
        categorical_feature: _LGBM_CategoricalFeatureConfiguration = "auto",
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        params: Optional[Dict[str, Any]] = None,
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        free_raw_data: bool = True,
        position: Optional[_LGBM_PositionType] = None,
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    ):
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        """Initialize Dataset.
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        Parameters
        ----------
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        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse, Sequence, list of Sequence, list of numpy array or pyarrow Table
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            Data source of Dataset.
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            If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM) or a LightGBM Dataset binary file.
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        label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Label of the data.
        reference : Dataset or None, optional (default=None)
            If this is Dataset for validation, training data should be used as reference.
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        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Weight for each instance. Weights should be non-negative.
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        group : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Group/query data.
            Only used in the learning-to-rank task.
            sum(group) = n_samples.
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            For example, if you have a 100-document dataset with ``group = [10, 20, 40, 10, 10, 10]``, that means that you have 6 groups,
            where the first 10 records are in the first group, records 11-30 are in the second group, records 31-70 are in the third group, etc.
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        init_score : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None, optional (default=None)
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            Init score for Dataset.
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        feature_name : list of str, or 'auto', optional (default="auto")
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            Feature names.
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            If 'auto' and data is pandas DataFrame or pyarrow Table, data columns names are used.
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        categorical_feature : list of str or int, or 'auto', optional (default="auto")
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            Categorical features.
            If list of int, interpreted as indices.
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            If list of str, interpreted as feature names (need to specify ``feature_name`` as well).
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            If 'auto' and data is pandas DataFrame, pandas unordered categorical columns are used.
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            All values in categorical features will be cast to int32 and thus should be less than int32 max value (2147483647).
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            Large values could be memory consuming. Consider using consecutive integers starting from zero.
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            All negative values in categorical features will be treated as missing values.
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            The output cannot be monotonically constrained with respect to a categorical feature.
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            Floating point numbers in categorical features will be rounded towards 0.
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        params : dict or None, optional (default=None)
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            Other parameters for Dataset.
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        free_raw_data : bool, optional (default=True)
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            If True, raw data is freed after constructing inner Dataset.
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        position : numpy 1-D array, pandas Series or None, optional (default=None)
            Position of items used in unbiased learning-to-rank task.
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        """
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        self._handle: Optional[_DatasetHandle] = None
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        self.data = data
        self.label = label
        self.reference = reference
        self.weight = weight
        self.group = group
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        self.position = position
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        self.init_score = init_score
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        self.feature_name: _LGBM_FeatureNameConfiguration = feature_name
        self.categorical_feature: _LGBM_CategoricalFeatureConfiguration = categorical_feature
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        self.params = deepcopy(params)
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        self.free_raw_data = free_raw_data
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        self.used_indices: Optional[List[int]] = None
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        self._need_slice = True
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        self._predictor: Optional[_InnerPredictor] = None
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        self.pandas_categorical: Optional[List[List]] = None
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        self._params_back_up: Optional[Dict[str, Any]] = None
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        self.version = 0
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        self._start_row = 0  # Used when pushing rows one by one.
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    def __del__(self) -> None:
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        try:
            self._free_handle()
        except AttributeError:
            pass
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    def _create_sample_indices(self, total_nrow: int) -> np.ndarray:
        """Get an array of randomly chosen indices from this ``Dataset``.

        Indices are sampled without replacement.

        Parameters
        ----------
        total_nrow : int
            Total number of rows to sample from.
            If this value is greater than the value of parameter ``bin_construct_sample_cnt``, only ``bin_construct_sample_cnt`` indices will be used.
            If Dataset has multiple input data, this should be the sum of rows of every file.

        Returns
        -------
        indices : numpy array
            Indices for sampled data.
        """
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        param_str = _param_dict_to_str(self.get_params())
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        sample_cnt = _get_sample_count(total_nrow, param_str)
        indices = np.empty(sample_cnt, dtype=np.int32)
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        ptr_data, _, _ = _c_int_array(indices)
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        actual_sample_cnt = ctypes.c_int32(0)

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        _safe_call(
            _LIB.LGBM_SampleIndices(
                ctypes.c_int32(total_nrow),
                _c_str(param_str),
                ptr_data,
                ctypes.byref(actual_sample_cnt),
            )
        )
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        assert sample_cnt == actual_sample_cnt.value
        return indices
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    def _init_from_ref_dataset(
        self,
        total_nrow: int,
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        ref_dataset: _DatasetHandle,
    ) -> "Dataset":
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        """Create dataset from a reference dataset.

        Parameters
        ----------
        total_nrow : int
            Number of rows expected to add to dataset.
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        ref_dataset : object
            Handle of reference dataset to extract metadata from.
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        Returns
        -------
        self : Dataset
            Constructed Dataset object.
        """
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        self._handle = ctypes.c_void_p()
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        _safe_call(
            _LIB.LGBM_DatasetCreateByReference(
                ref_dataset,
                ctypes.c_int64(total_nrow),
                ctypes.byref(self._handle),
            )
        )
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        return self

    def _init_from_sample(
        self,
        sample_data: List[np.ndarray],
        sample_indices: List[np.ndarray],
        sample_cnt: int,
        total_nrow: int,
    ) -> "Dataset":
        """Create Dataset from sampled data structures.

        Parameters
        ----------
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        sample_data : list of numpy array
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            Sample data for each column.
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        sample_indices : list of numpy array
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            Sample data row index for each column.
        sample_cnt : int
            Number of samples.
        total_nrow : int
            Total number of rows for all input files.

        Returns
        -------
        self : Dataset
            Constructed Dataset object.
        """
        ncol = len(sample_indices)
        assert len(sample_data) == ncol, "#sample data column != #column indices"

        for i in range(ncol):
            if sample_data[i].dtype != np.double:
                raise ValueError(f"sample_data[{i}] type {sample_data[i].dtype} is not double")
            if sample_indices[i].dtype != np.int32:
                raise ValueError(f"sample_indices[{i}] type {sample_indices[i].dtype} is not int32")

        # c type: double**
        # each double* element points to start of each column of sample data.
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        sample_col_ptr: _ctypes_float_array = (ctypes.POINTER(ctypes.c_double) * ncol)()
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        # c type int**
        # each int* points to start of indices for each column
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        indices_col_ptr: _ctypes_int_array = (ctypes.POINTER(ctypes.c_int32) * ncol)()
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        for i in range(ncol):
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            sample_col_ptr[i] = _c_float_array(sample_data[i])[0]
            indices_col_ptr[i] = _c_int_array(sample_indices[i])[0]
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        num_per_col = np.array([len(d) for d in sample_indices], dtype=np.int32)
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        num_per_col_ptr, _, _ = _c_int_array(num_per_col)
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        self._handle = ctypes.c_void_p()
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        params_str = _param_dict_to_str(self.get_params())
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromSampledColumn(
                ctypes.cast(sample_col_ptr, ctypes.POINTER(ctypes.POINTER(ctypes.c_double))),
                ctypes.cast(indices_col_ptr, ctypes.POINTER(ctypes.POINTER(ctypes.c_int32))),
                ctypes.c_int32(ncol),
                num_per_col_ptr,
                ctypes.c_int32(sample_cnt),
                ctypes.c_int32(total_nrow),
                ctypes.c_int64(total_nrow),
                _c_str(params_str),
                ctypes.byref(self._handle),
            )
        )
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        return self

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    def _push_rows(self, data: np.ndarray) -> "Dataset":
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        """Add rows to Dataset.

        Parameters
        ----------
        data : numpy 1-D array
            New data to add to the Dataset.

        Returns
        -------
        self : Dataset
            Dataset object.
        """
        nrow, ncol = data.shape
        data = data.reshape(data.size)
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        data_ptr, data_type, _ = _c_float_array(data)
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        _safe_call(
            _LIB.LGBM_DatasetPushRows(
                self._handle,
                data_ptr,
                data_type,
                ctypes.c_int32(nrow),
                ctypes.c_int32(ncol),
                ctypes.c_int32(self._start_row),
            )
        )
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        self._start_row += nrow
        return self

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    def get_params(self) -> Dict[str, Any]:
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        """Get the used parameters in the Dataset.

        Returns
        -------
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        params : dict
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            The used parameters in this Dataset object.
        """
        if self.params is not None:
            # no min_data, nthreads and verbose in this function
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            dataset_params = _ConfigAliases.get(
                "bin_construct_sample_cnt",
                "categorical_feature",
                "data_random_seed",
                "enable_bundle",
                "feature_pre_filter",
                "forcedbins_filename",
                "group_column",
                "header",
                "ignore_column",
                "is_enable_sparse",
                "label_column",
                "linear_tree",
                "max_bin",
                "max_bin_by_feature",
                "min_data_in_bin",
                "pre_partition",
                "precise_float_parser",
                "two_round",
                "use_missing",
                "weight_column",
                "zero_as_missing",
            )
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            return {k: v for k, v in self.params.items() if k in dataset_params}
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        else:
            return {}
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    def _free_handle(self) -> "Dataset":
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        if self._handle is not None:
            _safe_call(_LIB.LGBM_DatasetFree(self._handle))
            self._handle = None
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        self._need_slice = True
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        if self.used_indices is not None:
            self.data = None
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        return self
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    def _set_init_score_by_predictor(
        self,
        predictor: Optional[_InnerPredictor],
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        data: _LGBM_TrainDataType,
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        used_indices: Optional[Union[List[int], np.ndarray]],
2044
    ) -> "Dataset":
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        data_has_header = False
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        if isinstance(data, (str, Path)) and self.params is not None:
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            # check data has header or not
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            data_has_header = any(self.params.get(alias, False) for alias in _ConfigAliases.get("header"))
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        num_data = self.num_data()
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        if predictor is not None:
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            init_score: Union[np.ndarray, scipy.sparse.spmatrix] = predictor.predict(
                data=data,
                raw_score=True,
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                data_has_header=data_has_header,
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            )
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            init_score = init_score.ravel()
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            if used_indices is not None:
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                assert not self._need_slice
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                if isinstance(data, (str, Path)):
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                    sub_init_score = np.empty(num_data * predictor.num_class, dtype=np.float64)
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                    assert num_data == len(used_indices)
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                    for i in range(len(used_indices)):
                        for j in range(predictor.num_class):
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                            sub_init_score[i * predictor.num_class + j] = init_score[
                                used_indices[i] * predictor.num_class + j
                            ]
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                    init_score = sub_init_score
            if predictor.num_class > 1:
                # need to regroup init_score
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                new_init_score = np.empty(init_score.size, dtype=np.float64)
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                for i in range(num_data):
                    for j in range(predictor.num_class):
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                        new_init_score[j * num_data + i] = init_score[i * predictor.num_class + j]
                init_score = new_init_score
        elif self.init_score is not None:
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            init_score = np.full_like(self.init_score, fill_value=0.0, dtype=np.float64)
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        else:
            return self
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        self.set_init_score(init_score)
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        return self
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2081

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    def _lazy_init(
        self,
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        data: Optional[_LGBM_TrainDataType],
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        label: Optional[_LGBM_LabelType],
        reference: Optional["Dataset"],
        weight: Optional[_LGBM_WeightType],
        group: Optional[_LGBM_GroupType],
        init_score: Optional[_LGBM_InitScoreType],
        predictor: Optional[_InnerPredictor],
        feature_name: _LGBM_FeatureNameConfiguration,
        categorical_feature: _LGBM_CategoricalFeatureConfiguration,
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        params: Optional[Dict[str, Any]],
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        position: Optional[_LGBM_PositionType],
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    ) -> "Dataset":
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        if data is None:
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            self._handle = None
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            return self
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        if reference is not None:
            self.pandas_categorical = reference.pandas_categorical
            categorical_feature = reference.categorical_feature
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        if isinstance(data, pd_DataFrame):
            data, feature_name, categorical_feature, self.pandas_categorical = _data_from_pandas(
                data=data,
                feature_name=feature_name,
                categorical_feature=categorical_feature,
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                pandas_categorical=self.pandas_categorical,
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            )
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        elif _is_pyarrow_table(data) and feature_name == "auto":
            feature_name = data.column_names
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        # process for args
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        params = {} if params is None else params
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        args_names = inspect.signature(self.__class__._lazy_init).parameters.keys()
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        for key in params.keys():
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            if key in args_names:
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                _log_warning(
                    f"{key} keyword has been found in `params` and will be ignored.\n"
                    f"Please use {key} argument of the Dataset constructor to pass this parameter."
                )
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        # get categorical features
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        if isinstance(categorical_feature, list):
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            categorical_indices = set()
            feature_dict = {}
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            if isinstance(feature_name, list):
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                feature_dict = {name: i for i, name in enumerate(feature_name)}
            for name in categorical_feature:
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                if isinstance(name, str) and name in feature_dict:
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                    categorical_indices.add(feature_dict[name])
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                elif isinstance(name, int):
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                    categorical_indices.add(name)
                else:
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                    raise TypeError(f"Wrong type({type(name).__name__}) or unknown name({name}) in categorical_feature")
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            if categorical_indices:
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                for cat_alias in _ConfigAliases.get("categorical_feature"):
                    if cat_alias in params:
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                        # If the params[cat_alias] is equal to categorical_indices, do not report the warning.
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                        if not (isinstance(params[cat_alias], list) and set(params[cat_alias]) == categorical_indices):
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                            _log_warning(f"{cat_alias} in param dict is overridden.")
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                        params.pop(cat_alias, None)
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                params["categorical_column"] = sorted(categorical_indices)
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        params_str = _param_dict_to_str(params)
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        self.params = params
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        # process for reference dataset
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        ref_dataset = None
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        if isinstance(reference, Dataset):
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            ref_dataset = reference.construct()._handle
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        elif reference is not None:
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            raise TypeError("Reference dataset should be None or dataset instance")
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        # start construct data
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        if isinstance(data, (str, Path)):
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            self._handle = ctypes.c_void_p()
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            _safe_call(
                _LIB.LGBM_DatasetCreateFromFile(
                    _c_str(str(data)),
                    _c_str(params_str),
                    ref_dataset,
                    ctypes.byref(self._handle),
                )
            )
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        elif isinstance(data, scipy.sparse.csr_matrix):
            self.__init_from_csr(data, params_str, ref_dataset)
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        elif isinstance(data, scipy.sparse.csc_matrix):
            self.__init_from_csc(data, params_str, ref_dataset)
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        elif isinstance(data, np.ndarray):
            self.__init_from_np2d(data, params_str, ref_dataset)
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        elif _is_pyarrow_table(data):
            self.__init_from_pyarrow_table(data, params_str, ref_dataset)
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        elif isinstance(data, list) and len(data) > 0:
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            if _is_list_of_numpy_arrays(data):
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                self.__init_from_list_np2d(data, params_str, ref_dataset)
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            elif _is_list_of_sequences(data):
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                self.__init_from_seqs(data, ref_dataset)
            else:
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                raise TypeError("Data list can only be of ndarray or Sequence")
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        elif isinstance(data, Sequence):
            self.__init_from_seqs([data], ref_dataset)
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        else:
            try:
                csr = scipy.sparse.csr_matrix(data)
                self.__init_from_csr(csr, params_str, ref_dataset)
2183
            except BaseException as err:
2184
                raise TypeError(f"Cannot initialize Dataset from {type(data).__name__}") from err
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        if label is not None:
            self.set_label(label)
        if self.get_label() is None:
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            raise ValueError("Label should not be None")
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        if weight is not None:
            self.set_weight(weight)
        if group is not None:
            self.set_group(group)
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        if position is not None:
            self.set_position(position)
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        if isinstance(predictor, _InnerPredictor):
            if self._predictor is None and init_score is not None:
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                _log_warning("The init_score will be overridden by the prediction of init_model.")
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            self._set_init_score_by_predictor(predictor=predictor, data=data, used_indices=None)
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        elif init_score is not None:
            self.set_init_score(init_score)
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        elif predictor is not None:
2202
            raise TypeError(f"Wrong predictor type {type(predictor).__name__}")
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        # set feature names
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        return self.set_feature_name(feature_name)
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2205

2206
    @staticmethod
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    def _yield_row_from_seqlist(seqs: List[Sequence], indices: Iterable[int]) -> Iterator[np.ndarray]:
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        offset = 0
        seq_id = 0
        seq = seqs[seq_id]
        for row_id in indices:
            assert row_id >= offset, "sample indices are expected to be monotonic"
            while row_id >= offset + len(seq):
                offset += len(seq)
                seq_id += 1
                seq = seqs[seq_id]
            id_in_seq = row_id - offset
            row = seq[id_in_seq]
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            yield row if row.flags["OWNDATA"] else row.copy()
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    def __sample(self, seqs: List[Sequence], total_nrow: int) -> Tuple[List[np.ndarray], List[np.ndarray]]:
        """Sample data from seqs.

        Mimics behavior in c_api.cpp:LGBM_DatasetCreateFromMats()

        Returns
        -------
            sampled_rows, sampled_row_indices
        """
        indices = self._create_sample_indices(total_nrow)

        # Select sampled rows, transpose to column order.
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        sampled = np.array(list(self._yield_row_from_seqlist(seqs, indices)))
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        sampled = sampled.T

        filtered = []
        filtered_idx = []
        sampled_row_range = np.arange(len(indices), dtype=np.int32)
        for col in sampled:
            col_predicate = (np.abs(col) > ZERO_THRESHOLD) | np.isnan(col)
            filtered_col = col[col_predicate]
            filtered_row_idx = sampled_row_range[col_predicate]

            filtered.append(filtered_col)
            filtered_idx.append(filtered_row_idx)

        return filtered, filtered_idx

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    def __init_from_seqs(
        self,
        seqs: List[Sequence],
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        ref_dataset: Optional[_DatasetHandle],
2253
    ) -> "Dataset":
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        """
        Initialize data from list of Sequence objects.

        Sequence: Generic Data Access Object
            Supports random access and access by batch if properly defined by user

        Data scheme uniformity are trusted, not checked
        """
        total_nrow = sum(len(seq) for seq in seqs)

        # create validation dataset from ref_dataset
        if ref_dataset is not None:
            self._init_from_ref_dataset(total_nrow, ref_dataset)
        else:
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            param_str = _param_dict_to_str(self.get_params())
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            sample_cnt = _get_sample_count(total_nrow, param_str)

            sample_data, col_indices = self.__sample(seqs, total_nrow)
            self._init_from_sample(sample_data, col_indices, sample_cnt, total_nrow)

        for seq in seqs:
            nrow = len(seq)
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            batch_size = getattr(seq, "batch_size", None) or Sequence.batch_size
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            for start in range(0, nrow, batch_size):
                end = min(start + batch_size, nrow)
                self._push_rows(seq[start:end])
        return self

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    def __init_from_np2d(
        self,
        mat: np.ndarray,
        params_str: str,
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        ref_dataset: Optional[_DatasetHandle],
2287
    ) -> "Dataset":
2288
        """Initialize data from a 2-D numpy matrix."""
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        if len(mat.shape) != 2:
2290
            raise ValueError("Input numpy.ndarray must be 2 dimensional")
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        self._handle = ctypes.c_void_p()
2293
        data, layout = _np2d_to_np1d(mat)
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        ptr_data, type_ptr_data, _ = _c_float_array(data)
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromMat(
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int32(mat.shape[0]),
                ctypes.c_int32(mat.shape[1]),
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                ctypes.c_int(layout),
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                _c_str(params_str),
                ref_dataset,
                ctypes.byref(self._handle),
            )
        )
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        return self
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    def __init_from_list_np2d(
        self,
        mats: List[np.ndarray],
        params_str: str,
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        ref_dataset: Optional[_DatasetHandle],
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    ) -> "Dataset":
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        """Initialize data from a list of 2-D numpy matrices."""
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        ncol = mats[0].shape[1]
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        nrow = np.empty((len(mats),), np.int32)
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        ptr_data: _ctypes_float_array
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        if mats[0].dtype == np.float64:
            ptr_data = (ctypes.POINTER(ctypes.c_double) * len(mats))()
        else:
            ptr_data = (ctypes.POINTER(ctypes.c_float) * len(mats))()
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        layouts = (ctypes.c_int * len(mats))()
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        holders = []
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        type_ptr_data = -1
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        for i, mat in enumerate(mats):
            if len(mat.shape) != 2:
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                raise ValueError("Input numpy.ndarray must be 2 dimensional")
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            if mat.shape[1] != ncol:
2333
                raise ValueError("Input arrays must have same number of columns")
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2336

            nrow[i] = mat.shape[0]

2337
            mat, layout = _np2d_to_np1d(mat)
2338

2339
            chunk_ptr_data, chunk_type_ptr_data, holder = _c_float_array(mat)
2340
            if type_ptr_data != -1 and chunk_type_ptr_data != type_ptr_data:
2341
                raise ValueError("Input chunks must have same type")
2342
            ptr_data[i] = chunk_ptr_data
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            layouts[i] = layout
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            type_ptr_data = chunk_type_ptr_data
            holders.append(holder)

2347
        self._handle = ctypes.c_void_p()
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromMats(
                ctypes.c_int32(len(mats)),
                ctypes.cast(ptr_data, ctypes.POINTER(ctypes.POINTER(ctypes.c_double))),
                ctypes.c_int(type_ptr_data),
                nrow.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ctypes.c_int32(ncol),
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                layouts,
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                _c_str(params_str),
                ref_dataset,
                ctypes.byref(self._handle),
            )
        )
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        return self
2362

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    def __init_from_csr(
        self,
        csr: scipy.sparse.csr_matrix,
        params_str: str,
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        ref_dataset: Optional[_DatasetHandle],
2368
    ) -> "Dataset":
2369
        """Initialize data from a CSR matrix."""
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2370
        if len(csr.indices) != len(csr.data):
2371
            raise ValueError(f"Length mismatch: {len(csr.indices)} vs {len(csr.data)}")
2372
        self._handle = ctypes.c_void_p()
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        ptr_indptr, type_ptr_indptr, __ = _c_int_array(csr.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csr.data)
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2377
        assert csr.shape[1] <= _MAX_INT32
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        csr_indices = csr.indices.astype(np.int32, copy=False)
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromCSR(
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csr_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csr.indptr)),
                ctypes.c_int64(len(csr.data)),
                ctypes.c_int64(csr.shape[1]),
                _c_str(params_str),
                ref_dataset,
                ctypes.byref(self._handle),
            )
        )
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        return self
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    def __init_from_csc(
        self,
        csc: scipy.sparse.csc_matrix,
        params_str: str,
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        ref_dataset: Optional[_DatasetHandle],
2402
    ) -> "Dataset":
2403
        """Initialize data from a CSC matrix."""
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2404
        if len(csc.indices) != len(csc.data):
2405
            raise ValueError(f"Length mismatch: {len(csc.indices)} vs {len(csc.data)}")
2406
        self._handle = ctypes.c_void_p()
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        ptr_indptr, type_ptr_indptr, __ = _c_int_array(csc.indptr)
        ptr_data, type_ptr_data, _ = _c_float_array(csc.data)
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        assert csc.shape[0] <= _MAX_INT32
2412
        csc_indices = csc.indices.astype(np.int32, copy=False)
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromCSC(
                ptr_indptr,
                ctypes.c_int(type_ptr_indptr),
                csc_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                ptr_data,
                ctypes.c_int(type_ptr_data),
                ctypes.c_int64(len(csc.indptr)),
                ctypes.c_int64(len(csc.data)),
                ctypes.c_int64(csc.shape[0]),
                _c_str(params_str),
                ref_dataset,
                ctypes.byref(self._handle),
            )
        )
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        return self
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    def __init_from_pyarrow_table(
        self,
        table: pa_Table,
        params_str: str,
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        ref_dataset: Optional[_DatasetHandle],
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    ) -> "Dataset":
        """Initialize data from a PyArrow table."""
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2439
        if not (PYARROW_INSTALLED and CFFI_INSTALLED):
            raise LightGBMError("Cannot init Dataset from Arrow without 'pyarrow' and 'cffi' installed.")
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2441

        # Check that the input is valid: we only handle numbers (for now)
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        if not all(arrow_is_integer(t) or arrow_is_floating(t) or arrow_is_boolean(t) for t in table.schema.types):
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            raise ValueError("Arrow table may only have integer or floating point datatypes")

        # Export Arrow table to C
        c_array = _export_arrow_to_c(table)
        self._handle = ctypes.c_void_p()
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        _safe_call(
            _LIB.LGBM_DatasetCreateFromArrow(
                ctypes.c_int64(c_array.n_chunks),
                ctypes.c_void_p(c_array.chunks_ptr),
                ctypes.c_void_p(c_array.schema_ptr),
                _c_str(params_str),
                ref_dataset,
                ctypes.byref(self._handle),
            )
        )
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        return self

2460
    @staticmethod
2461
    def _compare_params_for_warning(
2462
2463
        params: Dict[str, Any],
        other_params: Dict[str, Any],
2464
        ignore_keys: Set[str],
2465
2466
    ) -> bool:
        """Compare two dictionaries with params ignoring some keys.
2467

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        It is only for the warning purpose.

        Parameters
        ----------
2472
        params : dict
2473
            One dictionary with parameters to compare.
2474
        other_params : dict
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            Another dictionary with parameters to compare.
        ignore_keys : set
            Keys that should be ignored during comparing two dictionaries.
2478
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2480

        Returns
        -------
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        compare_result : bool
          Returns whether two dictionaries with params are equal.
2483
        """
2484
        for k, v in other_params.items():
2485
            if k not in ignore_keys:
2486
                if k not in params or params[k] != v:
2487
                    return False
2488
        for k, v in params.items():
2489
            if k not in ignore_keys:
2490
                if k not in other_params or v != other_params[k]:
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                    return False
        return True

2494
    def construct(self) -> "Dataset":
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2499
        """Lazy init.

        Returns
        -------
        self : Dataset
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            Constructed Dataset object.
2501
        """
2502
        if self._handle is None:
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            if self.reference is not None:
2504
                reference_params = self.reference.get_params()
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                params = self.get_params()
                if params != reference_params:
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                    if not self._compare_params_for_warning(
                        params=params,
                        other_params=reference_params,
2510
                        ignore_keys=_ConfigAliases.get("categorical_feature"),
2511
                    ):
2512
                        _log_warning("Overriding the parameters from Reference Dataset.")
2513
                    self._update_params(reference_params)
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                if self.used_indices is None:
2515
                    # create valid
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                    self._lazy_init(
                        data=self.data,
                        label=self.label,
                        reference=self.reference,
                        weight=self.weight,
                        group=self.group,
                        position=self.position,
                        init_score=self.init_score,
                        predictor=self._predictor,
                        feature_name=self.feature_name,
                        categorical_feature="auto",
                        params=self.params,
                    )
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                else:
2530
                    # construct subset
2531
                    used_indices = _list_to_1d_numpy(self.used_indices, dtype=np.int32, name="used_indices")
2532
                    assert used_indices.flags.c_contiguous
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2533
                    if self.reference.group is not None:
2534
                        group_info = np.array(self.reference.group).astype(np.int32, copy=False)
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                        _, self.group = np.unique(
                            np.repeat(range(len(group_info)), repeats=group_info)[self.used_indices], return_counts=True
                        )
2538
                    self._handle = ctypes.c_void_p()
2539
                    params_str = _param_dict_to_str(self.params)
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                    _safe_call(
                        _LIB.LGBM_DatasetGetSubset(
                            self.reference.construct()._handle,
                            used_indices.ctypes.data_as(ctypes.POINTER(ctypes.c_int32)),
                            ctypes.c_int32(used_indices.shape[0]),
                            _c_str(params_str),
                            ctypes.byref(self._handle),
                        )
                    )
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                    if not self.free_raw_data:
                        self.get_data()
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                    if self.group is not None:
                        self.set_group(self.group)
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                    if self.position is not None:
                        self.set_position(self.position)
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                    if self.get_label() is None:
                        raise ValueError("Label should not be None.")
2557
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                    if (
                        isinstance(self._predictor, _InnerPredictor)
                        and self._predictor is not self.reference._predictor
                    ):
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2561
                        self.get_data()
2562
                        self._set_init_score_by_predictor(
2563
                            predictor=self._predictor, data=self.data, used_indices=used_indices
2564
                        )
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            else:
2566
                # create train
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                self._lazy_init(
                    data=self.data,
                    label=self.label,
                    reference=None,
                    weight=self.weight,
                    group=self.group,
                    init_score=self.init_score,
                    predictor=self._predictor,
                    feature_name=self.feature_name,
                    categorical_feature=self.categorical_feature,
                    params=self.params,
                    position=self.position,
                )
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            if self.free_raw_data:
                self.data = None
2582
            self.feature_name = self.get_feature_name()
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2583
        return self
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2584

2585
2586
    def create_valid(
        self,
2587
        data: _LGBM_TrainDataType,
2588
        label: Optional[_LGBM_LabelType] = None,
2589
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        weight: Optional[_LGBM_WeightType] = None,
        group: Optional[_LGBM_GroupType] = None,
        init_score: Optional[_LGBM_InitScoreType] = None,
2592
        params: Optional[Dict[str, Any]] = None,
2593
        position: Optional[_LGBM_PositionType] = None,
2594
    ) -> "Dataset":
2595
        """Create validation data align with current Dataset.
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        Parameters
        ----------
2599
        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse, Sequence, list of Sequence, list of numpy array or pyarrow Table
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            Data source of Dataset.
2601
            If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM) or a LightGBM Dataset binary file.
2602
        label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
2603
            Label of the data.
2604
        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
2605
            Weight for each instance. Weights should be non-negative.
2606
        group : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Group/query data.
            Only used in the learning-to-rank task.
            sum(group) = n_samples.
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            For example, if you have a 100-document dataset with ``group = [10, 20, 40, 10, 10, 10]``, that means that you have 6 groups,
            where the first 10 records are in the first group, records 11-30 are in the second group, records 31-70 are in the third group, etc.
2612
        init_score : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None, optional (default=None)
2613
            Init score for Dataset.
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        params : dict or None, optional (default=None)
2615
            Other parameters for validation Dataset.
2616
2617
        position : numpy 1-D array, pandas Series or None, optional (default=None)
            Position of items used in unbiased learning-to-rank task.
2618
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2620

        Returns
        -------
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        valid : Dataset
            Validation Dataset with reference to self.
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        """
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        ret = Dataset(
            data,
            label=label,
            reference=self,
            weight=weight,
            group=group,
            position=position,
            init_score=init_score,
            params=params,
            free_raw_data=self.free_raw_data,
        )
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2635
        ret._predictor = self._predictor
2636
        ret.pandas_categorical = self.pandas_categorical
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        return ret
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2638

2639
2640
2641
    def subset(
        self,
        used_indices: List[int],
2642
        params: Optional[Dict[str, Any]] = None,
2643
    ) -> "Dataset":
2644
        """Get subset of current Dataset.
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        Parameters
        ----------
        used_indices : list of int
2649
            Indices used to create the subset.
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        params : dict or None, optional (default=None)
2651
            These parameters will be passed to Dataset constructor.
2652
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        Returns
        -------
        subset : Dataset
            Subset of the current Dataset.
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        """
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        if params is None:
            params = self.params
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        ret = Dataset(
            None,
            reference=self,
            feature_name=self.feature_name,
            categorical_feature=self.categorical_feature,
            params=params,
            free_raw_data=self.free_raw_data,
        )
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        ret._predictor = self._predictor
2669
        ret.pandas_categorical = self.pandas_categorical
2670
        ret.used_indices = sorted(used_indices)
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2672
        return ret

2673
    def save_binary(self, filename: Union[str, Path]) -> "Dataset":
2674
        """Save Dataset to a binary file.
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2676
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        .. note::

            Please note that `init_score` is not saved in binary file.
            If you need it, please set it again after loading Dataset.

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        Parameters
        ----------
2683
        filename : str or pathlib.Path
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            Name of the output file.
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        Returns
        -------
        self : Dataset
            Returns self.
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        """
2691
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        _safe_call(
            _LIB.LGBM_DatasetSaveBinary(
                self.construct()._handle,
                _c_str(str(filename)),
            )
        )
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2697
        return self
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2698

2699
    def _update_params(self, params: Optional[Dict[str, Any]]) -> "Dataset":
2700
2701
        if not params:
            return self
2702
        params = deepcopy(params)
2703

2704
        def update() -> None:
2705
2706
2707
            if not self.params:
                self.params = params
            else:
2708
                self._params_back_up = deepcopy(self.params)
2709
2710
                self.params.update(params)

2711
        if self._handle is None:
2712
2713
2714
            update()
        elif params is not None:
            ret = _LIB.LGBM_DatasetUpdateParamChecking(
2715
                _c_str(_param_dict_to_str(self.params)),
2716
2717
                _c_str(_param_dict_to_str(params)),
            )
2718
2719
2720
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2722
2723
            if ret != 0:
                # could be updated if data is not freed
                if self.data is not None:
                    update()
                    self._free_handle()
                else:
2724
                    raise LightGBMError(_LIB.LGBM_GetLastError().decode("utf-8"))
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2725
        return self
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2727
    def _reverse_update_params(self) -> "Dataset":
2728
        if self._handle is None:
2729
2730
            self.params = deepcopy(self._params_back_up)
            self._params_back_up = None
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2731
        return self
2732

2733
2734
2735
    def set_field(
        self,
        field_name: str,
2736
        data: Optional[_LGBM_SetFieldType],
2737
    ) -> "Dataset":
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2738
        """Set property into the Dataset.
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2741

        Parameters
        ----------
2742
        field_name : str
2743
            The field name of the information.
2744
        data : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None
2745
            The data to be set.
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        Returns
        -------
        self : Dataset
            Dataset with set property.
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2751
        """
2752
        if self._handle is None:
2753
            raise Exception(f"Cannot set {field_name} before construct dataset")
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2754
        if data is None:
2755
            # set to None
2756
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            _safe_call(
                _LIB.LGBM_DatasetSetField(
                    self._handle,
                    _c_str(field_name),
                    None,
                    ctypes.c_int(0),
                    ctypes.c_int(_FIELD_TYPE_MAPPER[field_name]),
                )
            )
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2765
            return self
2766
2767

        # If the data is a arrow data, we can just pass it to C
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2773
        if _is_pyarrow_array(data) or _is_pyarrow_table(data):
            # If a table is being passed, we concatenate the columns. This is only valid for
            # 'init_score'.
            if _is_pyarrow_table(data):
                if field_name != "init_score":
                    raise ValueError(f"pyarrow tables are not supported for field '{field_name}'")
2774
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2780
                data = pa_chunked_array(
                    [
                        chunk
                        for array in data.columns  # type: ignore
                        for chunk in array.chunks
                    ]
                )
2781

2782
            c_array = _export_arrow_to_c(data)
2783
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2786
2787
2788
2789
2790
2791
            _safe_call(
                _LIB.LGBM_DatasetSetFieldFromArrow(
                    self._handle,
                    _c_str(field_name),
                    ctypes.c_int64(c_array.n_chunks),
                    ctypes.c_void_p(c_array.chunks_ptr),
                    ctypes.c_void_p(c_array.schema_ptr),
                )
            )
2792
2793
2794
            self.version += 1
            return self

2795
        dtype: "np.typing.DTypeLike"
2796
        if field_name == "init_score":
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2797
            dtype = np.float64
2798
            if _is_1d_collection(data):
2799
                data = _list_to_1d_numpy(data, dtype=dtype, name=field_name)
2800
            elif _is_2d_collection(data):
2801
                data = _data_to_2d_numpy(data, dtype=dtype, name=field_name)
2802
                data = data.ravel(order="F")
2803
2804
            else:
                raise TypeError(
2805
2806
                    "init_score must be list, numpy 1-D array or pandas Series.\n"
                    "In multiclass classification init_score can also be a list of lists, numpy 2-D array or pandas DataFrame."
2807
2808
                )
        else:
2809
            if field_name in {"group", "position"}:
2810
2811
2812
                dtype = np.int32
            else:
                dtype = np.float32
2813
            data = _list_to_1d_numpy(data, dtype=dtype, name=field_name)
2814

2815
        ptr_data: Union[_ctypes_float_ptr, _ctypes_int_ptr]
2816
        if data.dtype == np.float32 or data.dtype == np.float64:
2817
            ptr_data, type_data, _ = _c_float_array(data)
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2818
        elif data.dtype == np.int32:
2819
            ptr_data, type_data, _ = _c_int_array(data)
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wxchan committed
2820
        else:
2821
            raise TypeError(f"Expected np.float32/64 or np.int32, met type({data.dtype})")
2822
        if type_data != _FIELD_TYPE_MAPPER[field_name]:
2823
            raise TypeError("Input type error for set_field")
2824
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2829
2830
2831
2832
        _safe_call(
            _LIB.LGBM_DatasetSetField(
                self._handle,
                _c_str(field_name),
                ptr_data,
                ctypes.c_int(len(data)),
                ctypes.c_int(type_data),
            )
        )
2833
        self.version += 1
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2834
        return self
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2835

2836
    def get_field(self, field_name: str) -> Optional[np.ndarray]:
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2837
        """Get property from the Dataset.
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2838

2839
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2844
        Can only be run on a constructed Dataset.

        Unlike ``get_group()``, ``get_init_score()``, ``get_label()``, ``get_position()``, and ``get_weight()``,
        this method ignores any raw data passed into ``lgb.Dataset()`` on the Python side, and will only read
        data from the constructed C++ ``Dataset`` object.

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2846
        Parameters
        ----------
2847
        field_name : str
2848
            The field name of the information.
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2849
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2851

        Returns
        -------
2852
        info : numpy array or None
2853
            A numpy array with information from the Dataset.
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2854
        """
2855
        if self._handle is None:
2856
            raise Exception(f"Cannot get {field_name} before construct Dataset")
2857
2858
        tmp_out_len = ctypes.c_int(0)
        out_type = ctypes.c_int(0)
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2859
        ret = ctypes.POINTER(ctypes.c_void_p)()
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        _safe_call(
            _LIB.LGBM_DatasetGetField(
                self._handle,
                _c_str(field_name),
                ctypes.byref(tmp_out_len),
                ctypes.byref(ret),
                ctypes.byref(out_type),
            )
        )
2869
        if out_type.value != _FIELD_TYPE_MAPPER[field_name]:
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2871
2872
            raise TypeError("Return type error for get_field")
        if tmp_out_len.value == 0:
            return None
2873
        if out_type.value == _C_API_DTYPE_INT32:
2874
2875
            arr = _cint32_array_to_numpy(
                cptr=ctypes.cast(ret, ctypes.POINTER(ctypes.c_int32)),
2876
                length=tmp_out_len.value,
2877
            )
2878
        elif out_type.value == _C_API_DTYPE_FLOAT32:
2879
2880
            arr = _cfloat32_array_to_numpy(
                cptr=ctypes.cast(ret, ctypes.POINTER(ctypes.c_float)),
2881
                length=tmp_out_len.value,
2882
            )
2883
        elif out_type.value == _C_API_DTYPE_FLOAT64:
2884
2885
            arr = _cfloat64_array_to_numpy(
                cptr=ctypes.cast(ret, ctypes.POINTER(ctypes.c_double)),
2886
                length=tmp_out_len.value,
2887
            )
2888
        else:
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2889
            raise TypeError("Unknown type")
2890
        if field_name == "init_score":
2891
2892
2893
            num_data = self.num_data()
            num_classes = arr.size // num_data
            if num_classes > 1:
2894
                arr = arr.reshape((num_data, num_classes), order="F")
2895
        return arr
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2896

2897
2898
    def set_categorical_feature(
        self,
2899
        categorical_feature: _LGBM_CategoricalFeatureConfiguration,
2900
    ) -> "Dataset":
2901
        """Set categorical features.
2902
2903
2904

        Parameters
        ----------
2905
        categorical_feature : list of str or int, or 'auto'
2906
            Names or indices of categorical features.
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2911

        Returns
        -------
        self : Dataset
            Dataset with set categorical features.
2912
2913
        """
        if self.categorical_feature == categorical_feature:
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2914
            return self
2915
        if self.data is not None:
2916
2917
            if self.categorical_feature is None:
                self.categorical_feature = categorical_feature
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2918
                return self._free_handle()
2919
            elif categorical_feature == "auto":
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2920
                return self
2921
            else:
2922
2923
2924
2925
2926
                if self.categorical_feature != "auto":
                    _log_warning(
                        "categorical_feature in Dataset is overridden.\n"
                        f"New categorical_feature is {list(categorical_feature)}"
                    )
2927
                self.categorical_feature = categorical_feature
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2928
                return self._free_handle()
2929
        else:
2930
2931
2932
2933
            raise LightGBMError(
                "Cannot set categorical feature after freed raw data, "
                "set free_raw_data=False when construct Dataset to avoid this."
            )
2934

2935
2936
    def _set_predictor(
        self,
2937
        predictor: Optional[_InnerPredictor],
2938
    ) -> "Dataset":
2939
2940
2941
2942
        """Set predictor for continued training.

        It is not recommended for user to call this function.
        Please use init_model argument in engine.train() or engine.cv() instead.
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2943
        """
2944
        if predictor is None and self._predictor is None:
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2945
            return self
2946
        elif isinstance(predictor, _InnerPredictor) and isinstance(self._predictor, _InnerPredictor):
2947
2948
2949
            if (predictor == self._predictor) and (
                predictor.current_iteration() == self._predictor.current_iteration()
            ):
2950
                return self
2951
        if self._handle is None:
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2952
            self._predictor = predictor
2953
2954
        elif self.data is not None:
            self._predictor = predictor
2955
2956
2957
            self._set_init_score_by_predictor(
                predictor=self._predictor,
                data=self.data,
2958
                used_indices=None,
2959
            )
2960
2961
        elif self.used_indices is not None and self.reference is not None and self.reference.data is not None:
            self._predictor = predictor
2962
2963
2964
            self._set_init_score_by_predictor(
                predictor=self._predictor,
                data=self.reference.data,
2965
                used_indices=self.used_indices,
2966
            )
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Guolin Ke committed
2967
        else:
2968
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2971
            raise LightGBMError(
                "Cannot set predictor after freed raw data, "
                "set free_raw_data=False when construct Dataset to avoid this."
            )
2972
        return self
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2973

2974
    def set_reference(self, reference: "Dataset") -> "Dataset":
2975
        """Set reference Dataset.
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        Parameters
        ----------
        reference : Dataset
2980
            Reference that is used as a template to construct the current Dataset.
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2981
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2985

        Returns
        -------
        self : Dataset
            Dataset with set reference.
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Guolin Ke committed
2986
        """
2987
2988
2989
        self.set_categorical_feature(reference.categorical_feature).set_feature_name(
            reference.feature_name
        )._set_predictor(reference._predictor)
2990
        # we're done if self and reference share a common upstream reference
2991
        if self.get_ref_chain().intersection(reference.get_ref_chain()):
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2992
            return self
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2994
        if self.data is not None:
            self.reference = reference
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2995
            return self._free_handle()
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2996
        else:
2997
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            raise LightGBMError(
                "Cannot set reference after freed raw data, "
                "set free_raw_data=False when construct Dataset to avoid this."
            )
Guolin Ke's avatar
Guolin Ke committed
3001

3002
    def set_feature_name(self, feature_name: _LGBM_FeatureNameConfiguration) -> "Dataset":
3003
        """Set feature name.
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Guolin Ke committed
3004
3005
3006

        Parameters
        ----------
3007
        feature_name : list of str
3008
            Feature names.
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3010
3011
3012
3013

        Returns
        -------
        self : Dataset
            Dataset with set feature name.
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Guolin Ke committed
3014
        """
3015
        if feature_name != "auto":
3016
            self.feature_name = feature_name
3017
        if self._handle is not None and feature_name is not None and feature_name != "auto":
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3018
            if len(feature_name) != self.num_feature():
3019
3020
3021
                raise ValueError(
                    f"Length of feature_name({len(feature_name)}) and num_feature({self.num_feature()}) don't match"
                )
3022
            c_feature_name = [_c_str(name) for name in feature_name]
3023
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3029
            _safe_call(
                _LIB.LGBM_DatasetSetFeatureNames(
                    self._handle,
                    _c_array(ctypes.c_char_p, c_feature_name),
                    ctypes.c_int(len(feature_name)),
                )
            )
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3030
        return self
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3031

3032
    def set_label(self, label: Optional[_LGBM_LabelType]) -> "Dataset":
3033
        """Set label of Dataset.
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3034
3035
3036

        Parameters
        ----------
3037
        label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array, pyarrow ChunkedArray or None
3038
            The label information to be set into Dataset.
Nikita Titov's avatar
Nikita Titov committed
3039
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3041
3042
3043

        Returns
        -------
        self : Dataset
            Dataset with set label.
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Guolin Ke committed
3044
3045
        """
        self.label = label
3046
        if self._handle is not None:
3047
3048
            if isinstance(label, pd_DataFrame):
                if len(label.columns) > 1:
3049
                    raise ValueError("DataFrame for label cannot have multiple columns")
3050
                label_array = np.ravel(_pandas_to_numpy(label, target_dtype=np.float32))
3051
3052
            elif _is_pyarrow_array(label):
                label_array = label
3053
            else:
3054
3055
3056
                label_array = _list_to_1d_numpy(label, dtype=np.float32, name="label")
            self.set_field("label", label_array)
            self.label = self.get_field("label")  # original values can be modified at cpp side
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3057
        return self
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3058

3059
3060
    def set_weight(
        self,
3061
        weight: Optional[_LGBM_WeightType],
3062
    ) -> "Dataset":
3063
        """Set weight of each instance.
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Guolin Ke committed
3064
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3066

        Parameters
        ----------
3067
        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None
3068
            Weight to be set for each data point. Weights should be non-negative.
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        Returns
        -------
        self : Dataset
            Dataset with set weight.
Guolin Ke's avatar
Guolin Ke committed
3074
        """
3075
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        # Check if the weight contains values other than one
        if weight is not None:
            if _is_pyarrow_array(weight):
                if pa_compute.all(pa_compute.equal(weight, 1)).as_py():
                    weight = None
            elif np.all(weight == 1):
                weight = None
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Guolin Ke committed
3082
        self.weight = weight
3083
3084

        # Set field
3085
        if self._handle is not None and weight is not None:
3086
            if not _is_pyarrow_array(weight):
3087
3088
3089
                weight = _list_to_1d_numpy(weight, dtype=np.float32, name="weight")
            self.set_field("weight", weight)
            self.weight = self.get_field("weight")  # original values can be modified at cpp side
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3090
        return self
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3091

3092
3093
    def set_init_score(
        self,
3094
        init_score: Optional[_LGBM_InitScoreType],
3095
    ) -> "Dataset":
3096
        """Set init score of Booster to start from.
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Guolin Ke committed
3097
3098
3099

        Parameters
        ----------
3100
        init_score : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None
3101
            Init score for Booster.
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3106

        Returns
        -------
        self : Dataset
            Dataset with set init score.
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Guolin Ke committed
3107
3108
        """
        self.init_score = init_score
3109
        if self._handle is not None and init_score is not None:
3110
3111
            self.set_field("init_score", init_score)
            self.init_score = self.get_field("init_score")  # original values can be modified at cpp side
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Nikita Titov committed
3112
        return self
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Guolin Ke committed
3113

3114
3115
    def set_group(
        self,
3116
        group: Optional[_LGBM_GroupType],
3117
    ) -> "Dataset":
3118
        """Set group size of Dataset (used for ranking).
Guolin Ke's avatar
Guolin Ke committed
3119
3120
3121

        Parameters
        ----------
3122
        group : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None
3123
3124
3125
            Group/query data.
            Only used in the learning-to-rank task.
            sum(group) = n_samples.
3126
3127
            For example, if you have a 100-document dataset with ``group = [10, 20, 40, 10, 10, 10]``, that means that you have 6 groups,
            where the first 10 records are in the first group, records 11-30 are in the second group, records 31-70 are in the third group, etc.
Nikita Titov's avatar
Nikita Titov committed
3128
3129
3130
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3132

        Returns
        -------
        self : Dataset
            Dataset with set group.
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3133
3134
        """
        self.group = group
3135
        if self._handle is not None and group is not None:
3136
            if not _is_pyarrow_array(group):
3137
3138
                group = _list_to_1d_numpy(group, dtype=np.int32, name="group")
            self.set_field("group", group)
3139
            # original values can be modified at cpp side
3140
            constructed_group = self.get_field("group")
3141
3142
            if constructed_group is not None:
                self.group = np.diff(constructed_group)
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Nikita Titov committed
3143
        return self
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Guolin Ke committed
3144

3145
3146
    def set_position(
        self,
3147
        position: Optional[_LGBM_PositionType],
3148
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    ) -> "Dataset":
        """Set position of Dataset (used for ranking).

        Parameters
        ----------
        position : numpy 1-D array, pandas Series or None, optional (default=None)
            Position of items used in unbiased learning-to-rank task.

        Returns
        -------
        self : Dataset
            Dataset with set position.
        """
        self.position = position
        if self._handle is not None and position is not None:
3163
3164
            position = _list_to_1d_numpy(position, dtype=np.int32, name="position")
            self.set_field("position", position)
3165
3166
        return self

3167
    def get_feature_name(self) -> List[str]:
3168
3169
3170
3171
        """Get the names of columns (features) in the Dataset.

        Returns
        -------
3172
        feature_names : list of str
3173
3174
            The names of columns (features) in the Dataset.
        """
3175
        if self._handle is None:
3176
3177
3178
3179
3180
            raise LightGBMError("Cannot get feature_name before construct dataset")
        num_feature = self.num_feature()
        tmp_out_len = ctypes.c_int(0)
        reserved_string_buffer_size = 255
        required_string_buffer_size = ctypes.c_size_t(0)
3181
        string_buffers = [ctypes.create_string_buffer(reserved_string_buffer_size) for _ in range(num_feature)]
3182
        ptr_string_buffers = (ctypes.c_char_p * num_feature)(*map(ctypes.addressof, string_buffers))  # type: ignore[misc]
3183
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3192
        _safe_call(
            _LIB.LGBM_DatasetGetFeatureNames(
                self._handle,
                ctypes.c_int(num_feature),
                ctypes.byref(tmp_out_len),
                ctypes.c_size_t(reserved_string_buffer_size),
                ctypes.byref(required_string_buffer_size),
                ptr_string_buffers,
            )
        )
3193
3194
        if num_feature != tmp_out_len.value:
            raise ValueError("Length of feature names doesn't equal with num_feature")
3195
3196
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3198
        actual_string_buffer_size = required_string_buffer_size.value
        # if buffer length is not long enough, reallocate buffers
        if reserved_string_buffer_size < actual_string_buffer_size:
            string_buffers = [ctypes.create_string_buffer(actual_string_buffer_size) for _ in range(num_feature)]
3199
            ptr_string_buffers = (ctypes.c_char_p * num_feature)(*map(ctypes.addressof, string_buffers))  # type: ignore[misc]
3200
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3202
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3205
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3210
            _safe_call(
                _LIB.LGBM_DatasetGetFeatureNames(
                    self._handle,
                    ctypes.c_int(num_feature),
                    ctypes.byref(tmp_out_len),
                    ctypes.c_size_t(actual_string_buffer_size),
                    ctypes.byref(required_string_buffer_size),
                    ptr_string_buffers,
                )
            )
        return [string_buffers[i].value.decode("utf-8") for i in range(num_feature)]
3211

3212
    def get_label(self) -> Optional[_LGBM_LabelType]:
3213
        """Get the label of the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3214
3215
3216

        Returns
        -------
3217
        label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array, pyarrow ChunkedArray or None
3218
            The label information from the Dataset.
3219
            For a constructed ``Dataset``, this will only return a numpy array.
Guolin Ke's avatar
Guolin Ke committed
3220
        """
3221
        if self.label is None:
3222
            self.label = self.get_field("label")
Guolin Ke's avatar
Guolin Ke committed
3223
3224
        return self.label

3225
    def get_weight(self) -> Optional[_LGBM_WeightType]:
3226
        """Get the weight of the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3227
3228
3229

        Returns
        -------
3230
        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None
3231
            Weight for each data point from the Dataset. Weights should be non-negative.
3232
            For a constructed ``Dataset``, this will only return ``None`` or a numpy array.
Guolin Ke's avatar
Guolin Ke committed
3233
        """
3234
        if self.weight is None:
3235
            self.weight = self.get_field("weight")
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Guolin Ke committed
3236
3237
        return self.weight

3238
    def get_init_score(self) -> Optional[_LGBM_InitScoreType]:
3239
        """Get the initial score of the Dataset.
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Guolin Ke committed
3240
3241
3242

        Returns
        -------
3243
        init_score : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None
3244
            Init score of Booster.
3245
            For a constructed ``Dataset``, this will only return ``None`` or a numpy array.
Guolin Ke's avatar
Guolin Ke committed
3246
        """
3247
        if self.init_score is None:
3248
            self.init_score = self.get_field("init_score")
Guolin Ke's avatar
Guolin Ke committed
3249
3250
        return self.init_score

3251
    def get_data(self) -> Optional[_LGBM_TrainDataType]:
3252
3253
3254
3255
        """Get the raw data of the Dataset.

        Returns
        -------
3256
        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse, Sequence, list of Sequence, list of numpy array, pyarrow Table or None
3257
3258
            Raw data used in the Dataset construction.
        """
3259
        if self._handle is None:
3260
            raise Exception("Cannot get data before construct Dataset")
3261
        if self._need_slice and self.used_indices is not None and self.reference is not None:
Guolin Ke's avatar
Guolin Ke committed
3262
3263
            self.data = self.reference.data
            if self.data is not None:
3264
                if isinstance(self.data, (np.ndarray, scipy.sparse.spmatrix)):
Guolin Ke's avatar
Guolin Ke committed
3265
                    self.data = self.data[self.used_indices, :]
3266
                elif isinstance(self.data, pd_DataFrame):
Guolin Ke's avatar
Guolin Ke committed
3267
                    self.data = self.data.iloc[self.used_indices].copy()
3268
3269
                elif isinstance(self.data, Sequence):
                    self.data = self.data[self.used_indices]
3270
                elif _is_list_of_sequences(self.data) and len(self.data) > 0:
3271
                    self.data = np.array(list(self._yield_row_from_seqlist(self.data, self.used_indices)))
Guolin Ke's avatar
Guolin Ke committed
3272
                else:
3273
                    _log_warning(
3274
                        f"Cannot subset {type(self.data).__name__} type of raw data.\nReturning original raw data"
3275
                    )
3276
            self._need_slice = False
Guolin Ke's avatar
Guolin Ke committed
3277
        if self.data is None:
3278
3279
3280
3281
            raise LightGBMError(
                "Cannot call `get_data` after freed raw data, "
                "set free_raw_data=False when construct Dataset to avoid this."
            )
3282
3283
        return self.data

3284
    def get_group(self) -> Optional[_LGBM_GroupType]:
3285
        """Get the group of the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3286
3287
3288

        Returns
        -------
3289
        group : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None
3290
3291
3292
            Group/query data.
            Only used in the learning-to-rank task.
            sum(group) = n_samples.
3293
3294
            For example, if you have a 100-document dataset with ``group = [10, 20, 40, 10, 10, 10]``, that means that you have 6 groups,
            where the first 10 records are in the first group, records 11-30 are in the second group, records 31-70 are in the third group, etc.
3295
            For a constructed ``Dataset``, this will only return ``None`` or a numpy array.
Guolin Ke's avatar
Guolin Ke committed
3296
        """
3297
        if self.group is None:
3298
            self.group = self.get_field("group")
Guolin Ke's avatar
Guolin Ke committed
3299
3300
            if self.group is not None:
                # group data from LightGBM is boundaries data, need to convert to group size
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Nikita Titov committed
3301
                self.group = np.diff(self.group)
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Guolin Ke committed
3302
3303
        return self.group

3304
    def get_position(self) -> Optional[_LGBM_PositionType]:
3305
3306
3307
3308
        """Get the position of the Dataset.

        Returns
        -------
3309
        position : numpy 1-D array, pandas Series or None
3310
            Position of items used in unbiased learning-to-rank task.
3311
            For a constructed ``Dataset``, this will only return ``None`` or a numpy array.
3312
3313
        """
        if self.position is None:
3314
            self.position = self.get_field("position")
3315
3316
        return self.position

3317
    def num_data(self) -> int:
3318
        """Get the number of rows in the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3319
3320
3321

        Returns
        -------
3322
3323
        number_of_rows : int
            The number of rows in the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3324
        """
3325
        if self._handle is not None:
3326
            ret = ctypes.c_int(0)
3327
3328
3329
3330
3331
3332
            _safe_call(
                _LIB.LGBM_DatasetGetNumData(
                    self._handle,
                    ctypes.byref(ret),
                )
            )
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3333
            return ret.value
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Guolin Ke committed
3334
        else:
3335
            raise LightGBMError("Cannot get num_data before construct dataset")
Guolin Ke's avatar
Guolin Ke committed
3336

3337
    def num_feature(self) -> int:
3338
        """Get the number of columns (features) in the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3339
3340
3341

        Returns
        -------
3342
3343
        number_of_columns : int
            The number of columns (features) in the Dataset.
Guolin Ke's avatar
Guolin Ke committed
3344
        """
3345
        if self._handle is not None:
3346
            ret = ctypes.c_int(0)
3347
3348
3349
3350
3351
3352
            _safe_call(
                _LIB.LGBM_DatasetGetNumFeature(
                    self._handle,
                    ctypes.byref(ret),
                )
            )
wxchan's avatar
wxchan committed
3353
            return ret.value
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Guolin Ke committed
3354
        else:
3355
            raise LightGBMError("Cannot get num_feature before construct dataset")
Guolin Ke's avatar
Guolin Ke committed
3356

3357
    def feature_num_bin(self, feature: Union[int, str]) -> int:
3358
3359
        """Get the number of bins for a feature.

3360
3361
        .. versionadded:: 4.0.0

3362
3363
        Parameters
        ----------
3364
3365
        feature : int or str
            Index or name of the feature.
3366
3367
3368
3369
3370
3371

        Returns
        -------
        number_of_bins : int
            The number of constructed bins for the feature in the Dataset.
        """
3372
        if self._handle is not None:
3373
            if isinstance(feature, str):
3374
3375
3376
                feature_index = self.feature_name.index(feature)
            else:
                feature_index = feature
3377
            ret = ctypes.c_int(0)
3378
3379
3380
3381
3382
3383
3384
            _safe_call(
                _LIB.LGBM_DatasetGetFeatureNumBin(
                    self._handle,
                    ctypes.c_int(feature_index),
                    ctypes.byref(ret),
                )
            )
3385
3386
3387
3388
            return ret.value
        else:
            raise LightGBMError("Cannot get feature_num_bin before construct dataset")

3389
    def get_ref_chain(self, ref_limit: int = 100) -> Set["Dataset"]:
3390
3391
3392
3393
3394
        """Get a chain of Dataset objects.

        Starts with r, then goes to r.reference (if exists),
        then to r.reference.reference, etc.
        until we hit ``ref_limit`` or a reference loop.
3395
3396
3397
3398
3399

        Parameters
        ----------
        ref_limit : int, optional (default=100)
            The limit number of references.
3400
3401
3402

        Returns
        -------
3403
3404
3405
        ref_chain : set of Dataset
            Chain of references of the Datasets.
        """
3406
        head = self
3407
        ref_chain: Set[Dataset] = set()
3408
3409
        while len(ref_chain) < ref_limit:
            if isinstance(head, Dataset):
3410
                ref_chain.add(head)
3411
3412
3413
3414
3415
3416
                if (head.reference is not None) and (head.reference not in ref_chain):
                    head = head.reference
                else:
                    break
            else:
                break
Nikita Titov's avatar
Nikita Titov committed
3417
        return ref_chain
3418

3419
    def add_features_from(self, other: "Dataset") -> "Dataset":
3420
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3432
3433
        """Add features from other Dataset to the current Dataset.

        Both Datasets must be constructed before calling this method.

        Parameters
        ----------
        other : Dataset
            The Dataset to take features from.

        Returns
        -------
        self : Dataset
            Dataset with the new features added.
        """
3434
        if self._handle is None or other._handle is None:
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            raise ValueError("Both source and target Datasets must be constructed before adding features")
        _safe_call(
            _LIB.LGBM_DatasetAddFeaturesFrom(
                self._handle,
                other._handle,
            )
        )
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        was_none = self.data is None
        old_self_data_type = type(self.data).__name__
        if other.data is None:
            self.data = None
        elif self.data is not None:
            if isinstance(self.data, np.ndarray):
                if isinstance(other.data, np.ndarray):
                    self.data = np.hstack((self.data, other.data))
3450
                elif isinstance(other.data, scipy.sparse.spmatrix):
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3451
                    self.data = np.hstack((self.data, other.data.toarray()))
3452
                elif isinstance(other.data, pd_DataFrame):
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                    self.data = np.hstack((self.data, other.data.values))
                else:
                    self.data = None
3456
            elif isinstance(self.data, scipy.sparse.spmatrix):
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3457
                sparse_format = self.data.getformat()
3458
                if isinstance(other.data, (np.ndarray, scipy.sparse.spmatrix)):
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3459
                    self.data = scipy.sparse.hstack((self.data, other.data), format=sparse_format)
3460
                elif isinstance(other.data, pd_DataFrame):
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                    self.data = scipy.sparse.hstack((self.data, other.data.values), format=sparse_format)
                else:
                    self.data = None
3464
            elif isinstance(self.data, pd_DataFrame):
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3465
                if not PANDAS_INSTALLED:
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                    raise LightGBMError(
                        "Cannot add features to DataFrame type of raw data "
                        "without pandas installed. "
                        "Install pandas and restart your session."
                    )
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3471
                if isinstance(other.data, np.ndarray):
3472
                    self.data = concat((self.data, pd_DataFrame(other.data)), axis=1, ignore_index=True)
3473
                elif isinstance(other.data, scipy.sparse.spmatrix):
3474
                    self.data = concat((self.data, pd_DataFrame(other.data.toarray())), axis=1, ignore_index=True)
3475
                elif isinstance(other.data, pd_DataFrame):
3476
                    self.data = concat((self.data, other.data), axis=1, ignore_index=True)
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                else:
                    self.data = None
            else:
                self.data = None
        if self.data is None:
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            err_msg = (
                f"Cannot add features from {type(other.data).__name__} type of raw data to "
                f"{old_self_data_type} type of raw data.\n"
            )
            err_msg += (
                "Set free_raw_data=False when construct Dataset to avoid this" if was_none else "Freeing raw data"
            )
3489
            _log_warning(err_msg)
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3490
        self.feature_name = self.get_feature_name()
3491
        _log_warning(
3492
            "Resetting categorical features.\n"
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            "You can set new categorical features via ``set_categorical_feature`` method"
        )
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3495
3496
        self.categorical_feature = "auto"
        self.pandas_categorical = None
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        return self

3499
    def _dump_text(self, filename: Union[str, Path]) -> "Dataset":
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        """Save Dataset to a text file.

        This format cannot be loaded back in by LightGBM, but is useful for debugging purposes.

        Parameters
        ----------
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        filename : str or pathlib.Path
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            Name of the output file.

        Returns
        -------
        self : Dataset
            Returns self.
        """
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        _safe_call(
            _LIB.LGBM_DatasetDumpText(
                self.construct()._handle,
                _c_str(str(filename)),
            )
        )
3520
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        return self

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3522

3523
3524
_LGBM_CustomObjectiveFunction = Callable[
    [np.ndarray, Dataset],
3525
    Tuple[np.ndarray, np.ndarray],
3526
]
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_LGBM_CustomEvalFunction = Union[
    Callable[
        [np.ndarray, Dataset],
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        _LGBM_EvalFunctionResultType,
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    ],
    Callable[
        [np.ndarray, Dataset],
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        List[_LGBM_EvalFunctionResultType],
    ],
3536
]
3537
3538


3539
class Booster:
3540
    """Booster in LightGBM."""
3541

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    def __init__(
        self,
        params: Optional[Dict[str, Any]] = None,
        train_set: Optional[Dataset] = None,
        model_file: Optional[Union[str, Path]] = None,
3547
        model_str: Optional[str] = None,
3548
    ):
3549
        """Initialize the Booster.
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        Parameters
        ----------
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        params : dict or None, optional (default=None)
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            Parameters for Booster.
        train_set : Dataset or None, optional (default=None)
            Training dataset.
3557
        model_file : str, pathlib.Path or None, optional (default=None)
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            Path to the model file.
3559
        model_str : str or None, optional (default=None)
3560
            Model will be loaded from this string.
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        """
3562
        self._handle = ctypes.c_void_p()
3563
        self._network = False
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3564
        self.__need_reload_eval_info = True
3565
        self._train_data_name = "training"
3566
        self.__set_objective_to_none = False
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3567
        self.best_iteration = -1
3568
        self.best_score: _LGBM_BoosterBestScoreType = {}
3569
        params = {} if params is None else deepcopy(params)
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        if train_set is not None:
3571
            # Training task
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            if not isinstance(train_set, Dataset):
3573
                raise TypeError(f"Training data should be Dataset instance, met {type(train_set).__name__}")
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            params = _choose_param_value(
                main_param_name="machines",
                params=params,
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                default_value=None,
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            )
            # if "machines" is given, assume user wants to do distributed learning, and set up network
            if params["machines"] is None:
                params.pop("machines", None)
            else:
                machines = params["machines"]
                if isinstance(machines, str):
3585
                    num_machines_from_machine_list = len(machines.split(","))
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3587
                elif isinstance(machines, (list, set)):
                    num_machines_from_machine_list = len(machines)
3588
                    machines = ",".join(machines)
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                else:
                    raise ValueError("Invalid machines in params.")

                params = _choose_param_value(
                    main_param_name="num_machines",
                    params=params,
3595
                    default_value=num_machines_from_machine_list,
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                )
                params = _choose_param_value(
                    main_param_name="local_listen_port",
                    params=params,
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                    default_value=12400,
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                )
                self.set_network(
                    machines=machines,
                    local_listen_port=params["local_listen_port"],
                    listen_time_out=params.get("time_out", 120),
3606
                    num_machines=params["num_machines"],
3607
                )
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            # construct booster object
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            train_set.construct()
            # copy the parameters from train_set
            params.update(train_set.get_params())
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            params_str = _param_dict_to_str(params)
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            _safe_call(
                _LIB.LGBM_BoosterCreate(
                    train_set._handle,
                    _c_str(params_str),
                    ctypes.byref(self._handle),
                )
            )
3620
            # save reference to data
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3621
            self.train_set = train_set
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3623
            self.valid_sets: List[Dataset] = []
            self.name_valid_sets: List[str] = []
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3624
            self.__num_dataset = 1
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            self.__init_predictor = train_set._predictor
            if self.__init_predictor is not None:
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                _safe_call(
                    _LIB.LGBM_BoosterMerge(
                        self._handle,
                        self.__init_predictor._handle,
                    )
                )
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3633
            out_num_class = ctypes.c_int(0)
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            _safe_call(
                _LIB.LGBM_BoosterGetNumClasses(
                    self._handle,
                    ctypes.byref(out_num_class),
                )
            )
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3640
            self.__num_class = out_num_class.value
3641
            # buffer for inner predict
3642
            self.__inner_predict_buffer: List[Optional[np.ndarray]] = [None]
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            self.__is_predicted_cur_iter = [False]
            self.__get_eval_info()
3645
            self.pandas_categorical = train_set.pandas_categorical
3646
            self.train_set_version = train_set.version
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3647
        elif model_file is not None:
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            # Prediction task
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3649
            out_num_iterations = ctypes.c_int(0)
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            _safe_call(
                _LIB.LGBM_BoosterCreateFromModelfile(
                    _c_str(str(model_file)),
                    ctypes.byref(out_num_iterations),
                    ctypes.byref(self._handle),
                )
            )
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3657
            out_num_class = ctypes.c_int(0)
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            _safe_call(
                _LIB.LGBM_BoosterGetNumClasses(
                    self._handle,
                    ctypes.byref(out_num_class),
                )
            )
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3664
            self.__num_class = out_num_class.value
3665
            self.pandas_categorical = _load_pandas_categorical(file_name=model_file)
3666
            if params:
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                _log_warning("Ignoring params argument, using parameters from model file.")
3668
            params = self._get_loaded_param()
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        elif model_str is not None:
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            self.model_from_string(model_str)
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            if params:
                _log_warning("Ignoring params argument, using parameters from model string.")
            params = self._get_loaded_param()
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3674
        else:
3675
            raise TypeError(
3676
                "Need at least one training dataset or model file or model string to create Booster instance"
3677
            )
3678
        self.params = params
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3679

3680
    def __del__(self) -> None:
3681
        try:
3682
            if self._network:
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                self.free_network()
        except AttributeError:
            pass
        try:
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            if self._handle is not None:
                _safe_call(_LIB.LGBM_BoosterFree(self._handle))
3689
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        except AttributeError:
            pass
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3691

3692
    def __copy__(self) -> "Booster":
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3693
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        return self.__deepcopy__(None)

3695
    def __deepcopy__(self, *args: Any, **kwargs: Any) -> "Booster":
3696
        model_str = self.model_to_string(num_iteration=-1)
3697
        return Booster(model_str=model_str)
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3698

3699
    def __getstate__(self) -> Dict[str, Any]:
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        this = self.__dict__.copy()
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        handle = this["_handle"]
        this.pop("train_set", None)
        this.pop("valid_sets", None)
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        if handle is not None:
3705
            this["_handle"] = self.model_to_string(num_iteration=-1)
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        return this

3708
    def __setstate__(self, state: Dict[str, Any]) -> None:
3709
        model_str = state.get("_handle", state.get("handle", None))
3710
        if model_str is not None:
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3711
            handle = ctypes.c_void_p()
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3712
            out_num_iterations = ctypes.c_int(0)
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            _safe_call(
                _LIB.LGBM_BoosterLoadModelFromString(
                    _c_str(model_str),
                    ctypes.byref(out_num_iterations),
                    ctypes.byref(handle),
                )
            )
            state["_handle"] = handle
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        self.__dict__.update(state)

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    def _get_loaded_param(self) -> Dict[str, Any]:
        buffer_len = 1 << 20
        tmp_out_len = ctypes.c_int64(0)
        string_buffer = ctypes.create_string_buffer(buffer_len)
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        ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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        _safe_call(
            _LIB.LGBM_BoosterGetLoadedParam(
                self._handle,
                ctypes.c_int64(buffer_len),
                ctypes.byref(tmp_out_len),
                ptr_string_buffer,
            )
        )
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        actual_len = tmp_out_len.value
        # if buffer length is not long enough, re-allocate a buffer
        if actual_len > buffer_len:
            string_buffer = ctypes.create_string_buffer(actual_len)
3740
            ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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            _safe_call(
                _LIB.LGBM_BoosterGetLoadedParam(
                    self._handle,
                    ctypes.c_int64(actual_len),
                    ctypes.byref(tmp_out_len),
                    ptr_string_buffer,
                )
            )
        return json.loads(string_buffer.value.decode("utf-8"))
3750

3751
    def free_dataset(self) -> "Booster":
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        """Free Booster's Datasets.

        Returns
        -------
        self : Booster
            Booster without Datasets.
        """
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        self.__dict__.pop("train_set", None)
        self.__dict__.pop("valid_sets", None)
3761
        self.__num_dataset = 0
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3762
        return self
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3763

3764
    def _free_buffer(self) -> "Booster":
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        self.__inner_predict_buffer = []
        self.__is_predicted_cur_iter = []
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        return self
3768

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    def set_network(
        self,
        machines: Union[List[str], Set[str], str],
        local_listen_port: int = 12400,
        listen_time_out: int = 120,
3774
        num_machines: int = 1,
3775
    ) -> "Booster":
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3779
        """Set the network configuration.

        Parameters
        ----------
3780
        machines : list, set or str
3781
            Names of machines.
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3782
        local_listen_port : int, optional (default=12400)
3783
            TCP listen port for local machines.
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3784
        listen_time_out : int, optional (default=120)
3785
            Socket time-out in minutes.
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3786
        num_machines : int, optional (default=1)
3787
            The number of machines for distributed learning application.
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        Returns
        -------
        self : Booster
            Booster with set network.
3793
        """
3794
        if isinstance(machines, (list, set)):
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            machines = ",".join(machines)
        _safe_call(
            _LIB.LGBM_NetworkInit(
                _c_str(machines),
                ctypes.c_int(local_listen_port),
                ctypes.c_int(listen_time_out),
                ctypes.c_int(num_machines),
            )
        )
3804
        self._network = True
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3805
        return self
3806

3807
    def free_network(self) -> "Booster":
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3814
        """Free Booster's network.

        Returns
        -------
        self : Booster
            Booster with freed network.
        """
3815
        _safe_call(_LIB.LGBM_NetworkFree())
3816
        self._network = False
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3817
        return self
3818

3819
    def trees_to_dataframe(self) -> pd_DataFrame:
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3821
        """Parse the fitted model and return in an easy-to-read pandas DataFrame.

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3825
        The returned DataFrame has the following columns.

            - ``tree_index`` : int64, which tree a node belongs to. 0-based, so a value of ``6``, for example, means "this node is in the 7th tree".
            - ``node_depth`` : int64, how far a node is from the root of the tree. The root node has a value of ``1``, its direct children are ``2``, etc.
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            - ``node_index`` : str, unique identifier for a node.
            - ``left_child`` : str, ``node_index`` of the child node to the left of a split. ``None`` for leaf nodes.
            - ``right_child`` : str, ``node_index`` of the child node to the right of a split. ``None`` for leaf nodes.
            - ``parent_index`` : str, ``node_index`` of this node's parent. ``None`` for the root node.
            - ``split_feature`` : str, name of the feature used for splitting. ``None`` for leaf nodes.
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3832
            - ``split_gain`` : float64, gain from adding this split to the tree. ``NaN`` for leaf nodes.
            - ``threshold`` : float64, value of the feature used to decide which side of the split a record will go down. ``NaN`` for leaf nodes.
3833
            - ``decision_type`` : str, logical operator describing how to compare a value to ``threshold``.
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3835
              For example, ``split_feature = "Column_10", threshold = 15, decision_type = "<="`` means that
              records where ``Column_10 <= 15`` follow the left side of the split, otherwise follows the right side of the split. ``None`` for leaf nodes.
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3837
            - ``missing_direction`` : str, split direction that missing values should go to. ``None`` for leaf nodes.
            - ``missing_type`` : str, describes what types of values are treated as missing.
3838
            - ``value`` : float64, predicted value for this leaf node, multiplied by the learning rate.
3839
            - ``weight`` : float64 or int64, sum of Hessian (second-order derivative of objective), summed over observations that fall in this node.
3840
3841
            - ``count`` : int64, number of records in the training data that fall into this node.

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3847
        Returns
        -------
        result : pandas DataFrame
            Returns a pandas DataFrame of the parsed model.
        """
        if not PANDAS_INSTALLED:
3848
3849
3850
3851
            raise LightGBMError(
                "This method cannot be run without pandas installed. "
                "You must install pandas and restart your session to use this method."
            )
3852
3853

        if self.num_trees() == 0:
3854
            raise LightGBMError("There are no trees in this Booster and thus nothing to parse")
3855

3856
        def _is_split_node(tree: Dict[str, Any]) -> bool:
3857
            return "split_index" in tree.keys()
3858

3859
3860
3861
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3863
        def create_node_record(
            tree: Dict[str, Any],
            node_depth: int = 1,
            tree_index: Optional[int] = None,
            feature_names: Optional[List[str]] = None,
3864
            parent_node: Optional[str] = None,
3865
3866
3867
        ) -> Dict[str, Any]:
            def _get_node_index(
                tree: Dict[str, Any],
3868
                tree_index: Optional[int],
3869
            ) -> str:
3870
                tree_num = f"{tree_index}-" if tree_index is not None else ""
3871
                is_split = _is_split_node(tree)
3872
                node_type = "S" if is_split else "L"
3873
                # if a single node tree it won't have `leaf_index` so return 0
3874
                node_num = tree.get("split_index" if is_split else "leaf_index", 0)
3875
                return f"{tree_num}{node_type}{node_num}"
3876

3877
3878
            def _get_split_feature(
                tree: Dict[str, Any],
3879
                feature_names: Optional[List[str]],
3880
            ) -> Optional[str]:
3881
3882
                if _is_split_node(tree):
                    if feature_names is not None:
3883
                        feature_name = feature_names[tree["split_feature"]]
3884
                    else:
3885
                        feature_name = tree["split_feature"]
3886
3887
3888
3889
                else:
                    feature_name = None
                return feature_name

3890
            def _is_single_node_tree(tree: Dict[str, Any]) -> bool:
3891
                return set(tree.keys()) == {"leaf_value", "leaf_count"}
3892
3893

            # Create the node record, and populate universal data members
3894
            node: Dict[str, Union[int, str, None]] = OrderedDict()
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            node["tree_index"] = tree_index
            node["node_depth"] = node_depth
            node["node_index"] = _get_node_index(tree, tree_index)
            node["left_child"] = None
            node["right_child"] = None
            node["parent_index"] = parent_node
            node["split_feature"] = _get_split_feature(tree, feature_names)
            node["split_gain"] = None
            node["threshold"] = None
            node["decision_type"] = None
            node["missing_direction"] = None
            node["missing_type"] = None
            node["value"] = None
            node["weight"] = None
            node["count"] = None
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            # Update values to reflect node type (leaf or split)
            if _is_split_node(tree):
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                node["left_child"] = _get_node_index(tree["left_child"], tree_index)
                node["right_child"] = _get_node_index(tree["right_child"], tree_index)
                node["split_gain"] = tree["split_gain"]
                node["threshold"] = tree["threshold"]
                node["decision_type"] = tree["decision_type"]
                node["missing_direction"] = "left" if tree["default_left"] else "right"
                node["missing_type"] = tree["missing_type"]
                node["value"] = tree["internal_value"]
                node["weight"] = tree["internal_weight"]
                node["count"] = tree["internal_count"]
3923
            else:
3924
                node["value"] = tree["leaf_value"]
3925
                if not _is_single_node_tree(tree):
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                    node["weight"] = tree["leaf_weight"]
                    node["count"] = tree["leaf_count"]
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            return node

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        def tree_dict_to_node_list(
            tree: Dict[str, Any],
            node_depth: int = 1,
            tree_index: Optional[int] = None,
            feature_names: Optional[List[str]] = None,
3936
            parent_node: Optional[str] = None,
3937
        ) -> List[Dict[str, Any]]:
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            node = create_node_record(
                tree=tree,
                node_depth=node_depth,
                tree_index=tree_index,
                feature_names=feature_names,
                parent_node=parent_node,
            )
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            res = [node]

            if _is_split_node(tree):
                # traverse the next level of the tree
3950
                children = ["left_child", "right_child"]
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                for child in children:
                    subtree_list = tree_dict_to_node_list(
3953
                        tree=tree[child],
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                        node_depth=node_depth + 1,
                        tree_index=tree_index,
                        feature_names=feature_names,
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                        parent_node=node["node_index"],
3958
                    )
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                    # In tree format, "subtree_list" is a list of node records (dicts),
                    # and we add node to the list.
                    res.extend(subtree_list)
            return res

        model_dict = self.dump_model()
3965
        feature_names = model_dict["feature_names"]
3966
        model_list = []
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        for tree in model_dict["tree_info"]:
            model_list.extend(
                tree_dict_to_node_list(
                    tree=tree["tree_structure"], tree_index=tree["tree_index"], feature_names=feature_names
                )
            )
3973

3974
        return pd_DataFrame(model_list, columns=model_list[0].keys())
3975

3976
    def set_train_data_name(self, name: str) -> "Booster":
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        """Set the name to the training Dataset.

        Parameters
        ----------
3981
        name : str
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            Name for the training Dataset.

        Returns
        -------
        self : Booster
            Booster with set training Dataset name.
3988
        """
3989
        self._train_data_name = name
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        return self
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3992
    def add_valid(self, data: Dataset, name: str) -> "Booster":
3993
        """Add validation data.
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        Parameters
        ----------
        data : Dataset
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            Validation data.
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        name : str
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            Name of validation data.
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        Returns
        -------
        self : Booster
            Booster with set validation data.
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        """
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        if not isinstance(data, Dataset):
4008
            raise TypeError(f"Validation data should be Dataset instance, met {type(data).__name__}")
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        if data._predictor is not self.__init_predictor:
4010
            raise LightGBMError("Add validation data failed, you should use same predictor for these data")
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        _safe_call(
            _LIB.LGBM_BoosterAddValidData(
                self._handle,
                data.construct()._handle,
            )
        )
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        self.valid_sets.append(data)
        self.name_valid_sets.append(name)
        self.__num_dataset += 1
        self.__inner_predict_buffer.append(None)
        self.__is_predicted_cur_iter.append(False)
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        return self
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4024
    def reset_parameter(self, params: Dict[str, Any]) -> "Booster":
4025
        """Reset parameters of Booster.
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        Parameters
        ----------
        params : dict
4030
            New parameters for Booster.
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        Returns
        -------
        self : Booster
            Booster with new parameters.
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        """
4037
        params_str = _param_dict_to_str(params)
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4038
        if params_str:
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            _safe_call(
                _LIB.LGBM_BoosterResetParameter(
                    self._handle,
                    _c_str(params_str),
                )
            )
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        self.params.update(params)
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        return self
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4048
4049
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    def update(
        self,
        train_set: Optional[Dataset] = None,
4051
        fobj: Optional[_LGBM_CustomObjectiveFunction] = None,
4052
    ) -> bool:
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4053
        """Update Booster for one iteration.
4054

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        Parameters
        ----------
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        train_set : Dataset or None, optional (default=None)
            Training data.
            If None, last training data is used.
        fobj : callable or None, optional (default=None)
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4061
            Customized objective function.
4062
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4064
            Should accept two parameters: preds, train_data,
            and return (grad, hess).

4065
                preds : numpy 1-D array or numpy 2-D array (for multi-class task)
4066
                    The predicted values.
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4068
                    Predicted values are returned before any transformation,
                    e.g. they are raw margin instead of probability of positive class for binary task.
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                train_data : Dataset
                    The training dataset.
4071
                grad : numpy 1-D array or numpy 2-D array (for multi-class task)
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                    The value of the first order derivative (gradient) of the loss
                    with respect to the elements of preds for each sample point.
4074
                hess : numpy 1-D array or numpy 2-D array (for multi-class task)
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4076
                    The value of the second order derivative (Hessian) of the loss
                    with respect to the elements of preds for each sample point.
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4078
            For multi-class task, preds are numpy 2-D array of shape = [n_samples, n_classes],
4079
            and grad and hess should be returned in the same format.
4080

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        Returns
        -------
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        is_finished : bool
            Whether the update was successfully finished.
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4085
        """
4086
        # need reset training data
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        if train_set is None and self.train_set_version != self.train_set.version:
            train_set = self.train_set
            is_the_same_train_set = False
        else:
            is_the_same_train_set = train_set is self.train_set and self.train_set_version == train_set.version
        if train_set is not None and not is_the_same_train_set:
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4093
            if not isinstance(train_set, Dataset):
4094
                raise TypeError(f"Training data should be Dataset instance, met {type(train_set).__name__}")
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4095
            if train_set._predictor is not self.__init_predictor:
4096
                raise LightGBMError("Replace training data failed, you should use same predictor for these data")
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4097
            self.train_set = train_set
4098
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            _safe_call(
                _LIB.LGBM_BoosterResetTrainingData(
                    self._handle,
                    self.train_set.construct()._handle,
                )
            )
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4104
            self.__inner_predict_buffer[0] = None
4105
            self.train_set_version = self.train_set.version
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        is_finished = ctypes.c_int(0)
        if fobj is None:
4108
            if self.__set_objective_to_none:
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                raise LightGBMError("Cannot update due to null objective function.")
            _safe_call(
                _LIB.LGBM_BoosterUpdateOneIter(
                    self._handle,
                    ctypes.byref(is_finished),
                )
            )
4116
            self.__is_predicted_cur_iter = [False for _ in range(self.__num_dataset)]
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            return is_finished.value == 1
        else:
4119
            if not self.__set_objective_to_none:
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4120
                self.reset_parameter({"objective": "none"}).__set_objective_to_none = True
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            grad, hess = fobj(self.__inner_predict(0), self.train_set)
            return self.__boost(grad, hess)

4124
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4126
    def __boost(
        self,
        grad: np.ndarray,
4127
        hess: np.ndarray,
4128
    ) -> bool:
4129
        """Boost Booster for one iteration with customized gradient statistics.
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4130

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4132
        .. note::

4133
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            Score is returned before any transformation,
            e.g. it is raw margin instead of probability of positive class for binary task.
4135
            For multi-class task, score are numpy 2-D array of shape = [n_samples, n_classes],
4136
            and grad and hess should be returned in the same format.
4137

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4139
        Parameters
        ----------
4140
        grad : numpy 1-D array or numpy 2-D array (for multi-class task)
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4142
            The value of the first order derivative (gradient) of the loss
            with respect to the elements of score for each sample point.
4143
        hess : numpy 1-D array or numpy 2-D array (for multi-class task)
4144
4145
            The value of the second order derivative (Hessian) of the loss
            with respect to the elements of score for each sample point.
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        Returns
        -------
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4150
        is_finished : bool
            Whether the boost was successfully finished.
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4151
        """
4152
        if self.__num_class > 1:
4153
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4156
            grad = grad.ravel(order="F")
            hess = hess.ravel(order="F")
        grad = _list_to_1d_numpy(grad, dtype=np.float32, name="gradient")
        hess = _list_to_1d_numpy(hess, dtype=np.float32, name="hessian")
4157
4158
        assert grad.flags.c_contiguous
        assert hess.flags.c_contiguous
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4159
        if len(grad) != len(hess):
4160
4161
            raise ValueError(f"Lengths of gradient ({len(grad)}) and Hessian ({len(hess)}) don't match")
        num_train_data = self.train_set.num_data()
4162
        if len(grad) != num_train_data * self.__num_class:
4163
4164
4165
            raise ValueError(
                f"Lengths of gradient ({len(grad)}) and Hessian ({len(hess)}) "
                f"don't match training data length ({num_train_data}) * "
4166
                f"number of models per one iteration ({self.__num_class})"
4167
            )
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4168
        is_finished = ctypes.c_int(0)
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4176
        _safe_call(
            _LIB.LGBM_BoosterUpdateOneIterCustom(
                self._handle,
                grad.ctypes.data_as(ctypes.POINTER(ctypes.c_float)),
                hess.ctypes.data_as(ctypes.POINTER(ctypes.c_float)),
                ctypes.byref(is_finished),
            )
        )
4177
        self.__is_predicted_cur_iter = [False for _ in range(self.__num_dataset)]
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4179
        return is_finished.value == 1

4180
    def rollback_one_iter(self) -> "Booster":
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4187
        """Rollback one iteration.

        Returns
        -------
        self : Booster
            Booster with rolled back one iteration.
        """
4188
        _safe_call(_LIB.LGBM_BoosterRollbackOneIter(self._handle))
4189
        self.__is_predicted_cur_iter = [False for _ in range(self.__num_dataset)]
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4190
        return self
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4191

4192
    def current_iteration(self) -> int:
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4199
        """Get the index of the current iteration.

        Returns
        -------
        cur_iter : int
            The index of the current iteration.
        """
Guolin Ke's avatar
Guolin Ke committed
4200
        out_cur_iter = ctypes.c_int(0)
4201
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4204
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4206
        _safe_call(
            _LIB.LGBM_BoosterGetCurrentIteration(
                self._handle,
                ctypes.byref(out_cur_iter),
            )
        )
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        return out_cur_iter.value

4209
    def num_model_per_iteration(self) -> int:
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4217
        """Get number of models per iteration.

        Returns
        -------
        model_per_iter : int
            The number of models per iteration.
        """
        model_per_iter = ctypes.c_int(0)
4218
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4220
4221
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4223
        _safe_call(
            _LIB.LGBM_BoosterNumModelPerIteration(
                self._handle,
                ctypes.byref(model_per_iter),
            )
        )
4224
4225
        return model_per_iter.value

4226
    def num_trees(self) -> int:
4227
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4230
4231
4232
4233
4234
        """Get number of weak sub-models.

        Returns
        -------
        num_trees : int
            The number of weak sub-models.
        """
        num_trees = ctypes.c_int(0)
4235
4236
4237
4238
4239
4240
        _safe_call(
            _LIB.LGBM_BoosterNumberOfTotalModel(
                self._handle,
                ctypes.byref(num_trees),
            )
        )
4241
4242
        return num_trees.value

4243
    def upper_bound(self) -> float:
4244
4245
4246
4247
        """Get upper bound value of a model.

        Returns
        -------
4248
        upper_bound : float
4249
4250
4251
            Upper bound value of the model.
        """
        ret = ctypes.c_double(0)
4252
4253
4254
4255
4256
4257
        _safe_call(
            _LIB.LGBM_BoosterGetUpperBoundValue(
                self._handle,
                ctypes.byref(ret),
            )
        )
4258
4259
        return ret.value

4260
    def lower_bound(self) -> float:
4261
4262
4263
4264
        """Get lower bound value of a model.

        Returns
        -------
4265
        lower_bound : float
4266
4267
4268
            Lower bound value of the model.
        """
        ret = ctypes.c_double(0)
4269
4270
4271
4272
4273
4274
        _safe_call(
            _LIB.LGBM_BoosterGetLowerBoundValue(
                self._handle,
                ctypes.byref(ret),
            )
        )
4275
4276
        return ret.value

4277
4278
4279
4280
    def eval(
        self,
        data: Dataset,
        name: str,
4281
        feval: Optional[Union[_LGBM_CustomEvalFunction, List[_LGBM_CustomEvalFunction]]] = None,
4282
    ) -> List[_LGBM_BoosterEvalMethodResultType]:
4283
        """Evaluate for data.
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wxchan committed
4284
4285
4286

        Parameters
        ----------
4287
4288
        data : Dataset
            Data for the evaluating.
4289
        name : str
4290
            Name of the data.
4291
        feval : callable, list of callable, or None, optional (default=None)
4292
            Customized evaluation function.
4293
            Each evaluation function should accept two parameters: preds, eval_data,
4294
            and return (eval_name, eval_result, is_higher_better) or list of such tuples.
4295

4296
                preds : numpy 1-D array or numpy 2-D array (for multi-class task)
4297
                    The predicted values.
4298
                    For multi-class task, preds are numpy 2-D array of shape = [n_samples, n_classes].
4299
                    If custom objective function is used, predicted values are returned before any transformation,
4300
                    e.g. they are raw margin instead of probability of positive class for binary task in this case.
4301
                eval_data : Dataset
4302
                    A ``Dataset`` to evaluate.
4303
                eval_name : str
Andrew Ziem's avatar
Andrew Ziem committed
4304
                    The name of evaluation function (without whitespace).
4305
4306
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4309
                eval_result : float
                    The eval result.
                is_higher_better : bool
                    Is eval result higher better, e.g. AUC is ``is_higher_better``.

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wxchan committed
4310
4311
        Returns
        -------
Nikita Titov's avatar
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4312
        result : list
4313
            List with (dataset_name, eval_name, eval_result, is_higher_better) tuples.
wxchan's avatar
wxchan committed
4314
        """
Guolin Ke's avatar
Guolin Ke committed
4315
4316
        if not isinstance(data, Dataset):
            raise TypeError("Can only eval for Dataset instance")
wxchan's avatar
wxchan committed
4317
4318
4319
4320
        data_idx = -1
        if data is self.train_set:
            data_idx = 0
        else:
4321
            for i in range(len(self.valid_sets)):
wxchan's avatar
wxchan committed
4322
4323
4324
                if data is self.valid_sets[i]:
                    data_idx = i + 1
                    break
4325
        # need to push new valid data
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wxchan committed
4326
4327
4328
4329
        if data_idx == -1:
            self.add_valid(data, name)
            data_idx = self.__num_dataset - 1

4330
        return self.__inner_eval(data_name=name, data_idx=data_idx, feval=feval)
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wxchan committed
4331

4332
4333
    def eval_train(
        self,
4334
        feval: Optional[Union[_LGBM_CustomEvalFunction, List[_LGBM_CustomEvalFunction]]] = None,
4335
    ) -> List[_LGBM_BoosterEvalMethodResultType]:
4336
        """Evaluate for training data.
wxchan's avatar
wxchan committed
4337
4338
4339

        Parameters
        ----------
4340
        feval : callable, list of callable, or None, optional (default=None)
4341
            Customized evaluation function.
4342
            Each evaluation function should accept two parameters: preds, eval_data,
4343
            and return (eval_name, eval_result, is_higher_better) or list of such tuples.
4344

4345
                preds : numpy 1-D array or numpy 2-D array (for multi-class task)
4346
                    The predicted values.
4347
                    For multi-class task, preds are numpy 2-D array of shape = [n_samples, n_classes].
4348
                    If custom objective function is used, predicted values are returned before any transformation,
4349
                    e.g. they are raw margin instead of probability of positive class for binary task in this case.
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Akshita Dixit committed
4350
                eval_data : Dataset
4351
                    The training dataset.
4352
                eval_name : str
Andrew Ziem's avatar
Andrew Ziem committed
4353
                    The name of evaluation function (without whitespace).
4354
4355
4356
4357
4358
                eval_result : float
                    The eval result.
                is_higher_better : bool
                    Is eval result higher better, e.g. AUC is ``is_higher_better``.

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4360
        Returns
        -------
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4361
        result : list
4362
            List with (train_dataset_name, eval_name, eval_result, is_higher_better) tuples.
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4363
        """
4364
        return self.__inner_eval(data_name=self._train_data_name, data_idx=0, feval=feval)
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wxchan committed
4365

4366
4367
    def eval_valid(
        self,
4368
        feval: Optional[Union[_LGBM_CustomEvalFunction, List[_LGBM_CustomEvalFunction]]] = None,
4369
    ) -> List[_LGBM_BoosterEvalMethodResultType]:
4370
        """Evaluate for validation data.
wxchan's avatar
wxchan committed
4371
4372
4373

        Parameters
        ----------
4374
        feval : callable, list of callable, or None, optional (default=None)
4375
            Customized evaluation function.
4376
            Each evaluation function should accept two parameters: preds, eval_data,
4377
            and return (eval_name, eval_result, is_higher_better) or list of such tuples.
4378

4379
                preds : numpy 1-D array or numpy 2-D array (for multi-class task)
4380
                    The predicted values.
4381
                    For multi-class task, preds are numpy 2-D array of shape = [n_samples, n_classes].
4382
                    If custom objective function is used, predicted values are returned before any transformation,
4383
                    e.g. they are raw margin instead of probability of positive class for binary task in this case.
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Akshita Dixit committed
4384
                eval_data : Dataset
4385
                    The validation dataset.
4386
                eval_name : str
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Andrew Ziem committed
4387
                    The name of evaluation function (without whitespace).
4388
4389
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4391
4392
                eval_result : float
                    The eval result.
                is_higher_better : bool
                    Is eval result higher better, e.g. AUC is ``is_higher_better``.

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4393
4394
        Returns
        -------
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4395
        result : list
4396
            List with (validation_dataset_name, eval_name, eval_result, is_higher_better) tuples.
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wxchan committed
4397
        """
4398
4399
4400
        return [
            item
            for i in range(1, self.__num_dataset)
4401
            for item in self.__inner_eval(data_name=self.name_valid_sets[i - 1], data_idx=i, feval=feval)
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        ]
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    def save_model(
        self,
        filename: Union[str, Path],
        num_iteration: Optional[int] = None,
        start_iteration: int = 0,
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        importance_type: str = "split",
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    ) -> "Booster":
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        """Save Booster to file.
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        Parameters
        ----------
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        filename : str or pathlib.Path
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            Filename to save Booster.
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        num_iteration : int or None, optional (default=None)
            Index of the iteration that should be saved.
            If None, if the best iteration exists, it is saved; otherwise, all iterations are saved.
            If <= 0, all iterations are saved.
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        start_iteration : int, optional (default=0)
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            Start index of the iteration that should be saved.
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        importance_type : str, optional (default="split")
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            What type of feature importance should be saved.
            If "split", result contains numbers of times the feature is used in a model.
            If "gain", result contains total gains of splits which use the feature.
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        Returns
        -------
        self : Booster
            Returns self.
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        """
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        if num_iteration is None:
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            num_iteration = self.best_iteration
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        importance_type_int = _FEATURE_IMPORTANCE_TYPE_MAPPER[importance_type]
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        _safe_call(
            _LIB.LGBM_BoosterSaveModel(
                self._handle,
                ctypes.c_int(start_iteration),
                ctypes.c_int(num_iteration),
                ctypes.c_int(importance_type_int),
                _c_str(str(filename)),
            )
        )
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        _dump_pandas_categorical(self.pandas_categorical, filename)
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        return self
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    def shuffle_models(
        self,
        start_iteration: int = 0,
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        end_iteration: int = -1,
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    ) -> "Booster":
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        """Shuffle models.
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        Parameters
        ----------
        start_iteration : int, optional (default=0)
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            The first iteration that will be shuffled.
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        end_iteration : int, optional (default=-1)
            The last iteration that will be shuffled.
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            If <= 0, means the last available iteration.
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        Returns
        -------
        self : Booster
            Booster with shuffled models.
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        """
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        _safe_call(
            _LIB.LGBM_BoosterShuffleModels(
                self._handle,
                ctypes.c_int(start_iteration),
                ctypes.c_int(end_iteration),
            )
        )
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        return self
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    def model_from_string(self, model_str: str) -> "Booster":
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        """Load Booster from a string.

        Parameters
        ----------
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        model_str : str
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            Model will be loaded from this string.

        Returns
        -------
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        self : Booster
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            Loaded Booster object.
        """
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        # ensure that existing Booster is freed before replacing it
        # with a new one createdfrom file
        _safe_call(_LIB.LGBM_BoosterFree(self._handle))
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        self._free_buffer()
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        self._handle = ctypes.c_void_p()
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        out_num_iterations = ctypes.c_int(0)
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        _safe_call(
            _LIB.LGBM_BoosterLoadModelFromString(
                _c_str(model_str),
                ctypes.byref(out_num_iterations),
                ctypes.byref(self._handle),
            )
        )
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        out_num_class = ctypes.c_int(0)
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        _safe_call(
            _LIB.LGBM_BoosterGetNumClasses(
                self._handle,
                ctypes.byref(out_num_class),
            )
        )
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        self.__num_class = out_num_class.value
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        self.pandas_categorical = _load_pandas_categorical(model_str=model_str)
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        return self

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    def model_to_string(
        self,
        num_iteration: Optional[int] = None,
        start_iteration: int = 0,
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        importance_type: str = "split",
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    ) -> str:
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        """Save Booster to string.
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        Parameters
        ----------
        num_iteration : int or None, optional (default=None)
            Index of the iteration that should be saved.
            If None, if the best iteration exists, it is saved; otherwise, all iterations are saved.
            If <= 0, all iterations are saved.
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        start_iteration : int, optional (default=0)
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            Start index of the iteration that should be saved.
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        importance_type : str, optional (default="split")
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            What type of feature importance should be saved.
            If "split", result contains numbers of times the feature is used in a model.
            If "gain", result contains total gains of splits which use the feature.
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        Returns
        -------
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        str_repr : str
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            String representation of Booster.
        """
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        if num_iteration is None:
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            num_iteration = self.best_iteration
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        importance_type_int = _FEATURE_IMPORTANCE_TYPE_MAPPER[importance_type]
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        buffer_len = 1 << 20
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        tmp_out_len = ctypes.c_int64(0)
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        string_buffer = ctypes.create_string_buffer(buffer_len)
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        ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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        _safe_call(
            _LIB.LGBM_BoosterSaveModelToString(
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                self._handle,
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                ctypes.c_int(start_iteration),
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                ctypes.c_int(num_iteration),
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                ctypes.c_int(importance_type_int),
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                ctypes.c_int64(buffer_len),
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                ctypes.byref(tmp_out_len),
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                ptr_string_buffer,
            )
        )
        actual_len = tmp_out_len.value
        # if buffer length is not long enough, re-allocate a buffer
        if actual_len > buffer_len:
            string_buffer = ctypes.create_string_buffer(actual_len)
            ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
            _safe_call(
                _LIB.LGBM_BoosterSaveModelToString(
                    self._handle,
                    ctypes.c_int(start_iteration),
                    ctypes.c_int(num_iteration),
                    ctypes.c_int(importance_type_int),
                    ctypes.c_int64(actual_len),
                    ctypes.byref(tmp_out_len),
                    ptr_string_buffer,
                )
            )
        ret = string_buffer.value.decode("utf-8")
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        ret += _dump_pandas_categorical(self.pandas_categorical)
        return ret
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    def dump_model(
        self,
        num_iteration: Optional[int] = None,
        start_iteration: int = 0,
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        importance_type: str = "split",
        object_hook: Optional[Callable[[Dict[str, Any]], Dict[str, Any]]] = None,
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    ) -> Dict[str, Any]:
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        """Dump Booster to JSON format.
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        Parameters
        ----------
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        num_iteration : int or None, optional (default=None)
            Index of the iteration that should be dumped.
            If None, if the best iteration exists, it is dumped; otherwise, all iterations are dumped.
            If <= 0, all iterations are dumped.
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        start_iteration : int, optional (default=0)
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            Start index of the iteration that should be dumped.
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        importance_type : str, optional (default="split")
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            What type of feature importance should be dumped.
            If "split", result contains numbers of times the feature is used in a model.
            If "gain", result contains total gains of splits which use the feature.
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        object_hook : callable or None, optional (default=None)
            If not None, ``object_hook`` is a function called while parsing the json
            string returned by the C API. It may be used to alter the json, to store
            specific values while building the json structure. It avoids
            walking through the structure again. It saves a significant amount
            of time if the number of trees is huge.
            Signature is ``def object_hook(node: dict) -> dict``.
            None is equivalent to ``lambda node: node``.
            See documentation of ``json.loads()`` for further details.
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        Returns
        -------
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        json_repr : dict
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            JSON format of Booster.
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        """
4614
        if num_iteration is None:
4615
            num_iteration = self.best_iteration
4616
        importance_type_int = _FEATURE_IMPORTANCE_TYPE_MAPPER[importance_type]
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        buffer_len = 1 << 20
4618
        tmp_out_len = ctypes.c_int64(0)
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        string_buffer = ctypes.create_string_buffer(buffer_len)
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        ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
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        _safe_call(
            _LIB.LGBM_BoosterDumpModel(
4623
                self._handle,
4624
                ctypes.c_int(start_iteration),
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4625
                ctypes.c_int(num_iteration),
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                ctypes.c_int(importance_type_int),
4627
                ctypes.c_int64(buffer_len),
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                ctypes.byref(tmp_out_len),
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                ptr_string_buffer,
            )
        )
        actual_len = tmp_out_len.value
        # if buffer length is not long enough, reallocate a buffer
        if actual_len > buffer_len:
            string_buffer = ctypes.create_string_buffer(actual_len)
            ptr_string_buffer = ctypes.c_char_p(ctypes.addressof(string_buffer))
            _safe_call(
                _LIB.LGBM_BoosterDumpModel(
                    self._handle,
                    ctypes.c_int(start_iteration),
                    ctypes.c_int(num_iteration),
                    ctypes.c_int(importance_type_int),
                    ctypes.c_int64(actual_len),
                    ctypes.byref(tmp_out_len),
                    ptr_string_buffer,
                )
            )
        ret = json.loads(string_buffer.value.decode("utf-8"), object_hook=object_hook)
        ret["pandas_categorical"] = json.loads(
            json.dumps(
                self.pandas_categorical,
                default=_json_default_with_numpy,
            )
        )
4655
        return ret
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    def predict(
        self,
4659
        data: _LGBM_PredictDataType,
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        start_iteration: int = 0,
        num_iteration: Optional[int] = None,
        raw_score: bool = False,
        pred_leaf: bool = False,
        pred_contrib: bool = False,
        data_has_header: bool = False,
        validate_features: bool = False,
4667
        **kwargs: Any,
4668
    ) -> Union[np.ndarray, scipy.sparse.spmatrix, List[scipy.sparse.spmatrix]]:
4669
        """Make a prediction.
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        Parameters
        ----------
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        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse or pyarrow Table
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            Data source for prediction.
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            If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM).
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        start_iteration : int, optional (default=0)
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            Start index of the iteration to predict.
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            If <= 0, starts from the first iteration.
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        num_iteration : int or None, optional (default=None)
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            Total number of iterations used in the prediction.
            If None, if the best iteration exists and start_iteration <= 0, the best iteration is used;
            otherwise, all iterations from ``start_iteration`` are used (no limits).
            If <= 0, all iterations from ``start_iteration`` are used (no limits).
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        raw_score : bool, optional (default=False)
            Whether to predict raw scores.
        pred_leaf : bool, optional (default=False)
            Whether to predict leaf index.
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        pred_contrib : bool, optional (default=False)
            Whether to predict feature contributions.
4690

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            .. note::

                If you want to get more explanations for your model's predictions using SHAP values,
                like SHAP interaction values,
                you can install the shap package (https://github.com/slundberg/shap).
                Note that unlike the shap package, with ``pred_contrib`` we return a matrix with an extra
                column, where the last column is the expected value.
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        data_has_header : bool, optional (default=False)
            Whether the data has header.
4701
            Used only if data is str.
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        validate_features : bool, optional (default=False)
            If True, ensure that the features used to predict match the ones used to train.
            Used only if data is pandas DataFrame.
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        **kwargs
            Other parameters for the prediction.
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        Returns
        -------
4710
        result : numpy array, scipy.sparse or list of scipy.sparse
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            Prediction result.
4712
            Can be sparse or a list of sparse objects (each element represents predictions for one class) for feature contributions (when ``pred_contrib=True``).
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        """
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        predictor = _InnerPredictor.from_booster(
            booster=self,
            pred_parameter=deepcopy(kwargs),
        )
4718
        if num_iteration is None:
4719
            if start_iteration <= 0:
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                num_iteration = self.best_iteration
            else:
                num_iteration = -1
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        return predictor.predict(
            data=data,
            start_iteration=start_iteration,
            num_iteration=num_iteration,
            raw_score=raw_score,
            pred_leaf=pred_leaf,
            pred_contrib=pred_contrib,
            data_has_header=data_has_header,
4731
            validate_features=validate_features,
4732
        )
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    def refit(
        self,
4736
        data: _LGBM_TrainDataType,
4737
        label: _LGBM_LabelType,
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4739
        decay_rate: float = 0.9,
        reference: Optional[Dataset] = None,
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        weight: Optional[_LGBM_WeightType] = None,
        group: Optional[_LGBM_GroupType] = None,
        init_score: Optional[_LGBM_InitScoreType] = None,
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        feature_name: _LGBM_FeatureNameConfiguration = "auto",
        categorical_feature: _LGBM_CategoricalFeatureConfiguration = "auto",
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        dataset_params: Optional[Dict[str, Any]] = None,
        free_raw_data: bool = True,
        validate_features: bool = False,
4748
        **kwargs: Any,
4749
    ) -> "Booster":
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        """Refit the existing Booster by new data.

        Parameters
        ----------
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        data : str, pathlib.Path, numpy array, pandas DataFrame, scipy.sparse, Sequence, list of Sequence, list of numpy array or pyarrow Table
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            Data source for refit.
4756
            If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM).
4757
        label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array or pyarrow ChunkedArray
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            Label for refit.
        decay_rate : float, optional (default=0.9)
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            Decay rate of refit,
            will use ``leaf_output = decay_rate * old_leaf_output + (1.0 - decay_rate) * new_leaf_output`` to refit trees.
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        reference : Dataset or None, optional (default=None)
            Reference for ``data``.
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            .. versionadded:: 4.0.0

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        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Weight for each ``data`` instance. Weights should be non-negative.
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            .. versionadded:: 4.0.0

4772
        group : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
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            Group/query size for ``data``.
            Only used in the learning-to-rank task.
            sum(group) = n_samples.
            For example, if you have a 100-document dataset with ``group = [10, 20, 40, 10, 10, 10]``, that means that you have 6 groups,
            where the first 10 records are in the first group, records 11-30 are in the second group, records 31-70 are in the third group, etc.
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            .. versionadded:: 4.0.0

4781
        init_score : list, list of lists (for multi-class task), numpy array, pandas Series, pandas DataFrame (for multi-class task), pyarrow Array, pyarrow ChunkedArray, pyarrow Table (for multi-class task) or None, optional (default=None)
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            Init score for ``data``.
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            .. versionadded:: 4.0.0

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        feature_name : list of str, or 'auto', optional (default="auto")
            Feature names for ``data``.
            If 'auto' and data is pandas DataFrame, data columns names are used.
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            .. versionadded:: 4.0.0

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        categorical_feature : list of str or int, or 'auto', optional (default="auto")
            Categorical features for ``data``.
            If list of int, interpreted as indices.
            If list of str, interpreted as feature names (need to specify ``feature_name`` as well).
            If 'auto' and data is pandas DataFrame, pandas unordered categorical columns are used.
4797
            All values in categorical features will be cast to int32 and thus should be less than int32 max value (2147483647).
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            Large values could be memory consuming. Consider using consecutive integers starting from zero.
            All negative values in categorical features will be treated as missing values.
            The output cannot be monotonically constrained with respect to a categorical feature.
4801
            Floating point numbers in categorical features will be rounded towards 0.
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            .. versionadded:: 4.0.0

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        dataset_params : dict or None, optional (default=None)
            Other parameters for Dataset ``data``.
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            .. versionadded:: 4.0.0

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        free_raw_data : bool, optional (default=True)
            If True, raw data is freed after constructing inner Dataset for ``data``.
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            .. versionadded:: 4.0.0

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        validate_features : bool, optional (default=False)
            If True, ensure that the features used to refit the model match the original ones.
            Used only if data is pandas DataFrame.
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            .. versionadded:: 4.0.0

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        **kwargs
            Other parameters for refit.
4823
            These parameters will be passed to ``predict`` method.
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        Returns
        -------
        result : Booster
            Refitted Booster.
        """
4830
        if self.__set_objective_to_none:
4831
            raise LightGBMError("Cannot refit due to null objective function.")
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        if dataset_params is None:
            dataset_params = {}
4834
        predictor = _InnerPredictor.from_booster(booster=self, pred_parameter=deepcopy(kwargs))
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        leaf_preds: np.ndarray = predictor.predict(  # type: ignore[assignment]
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            data=data,
            start_iteration=-1,
            pred_leaf=True,
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            validate_features=validate_features,
4840
        )
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        nrow, ncol = leaf_preds.shape
4842
        out_is_linear = ctypes.c_int(0)
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        _safe_call(
            _LIB.LGBM_BoosterGetLinear(
                self._handle,
                ctypes.byref(out_is_linear),
            )
        )
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        new_params = _choose_param_value(
            main_param_name="linear_tree",
            params=self.params,
4852
            default_value=None,
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        )
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        new_params["linear_tree"] = bool(out_is_linear.value)
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        new_params.update(dataset_params)
        train_set = Dataset(
            data=data,
            label=label,
            reference=reference,
            weight=weight,
            group=group,
            init_score=init_score,
            feature_name=feature_name,
            categorical_feature=categorical_feature,
            params=new_params,
            free_raw_data=free_raw_data,
        )
4868
        new_params["refit_decay_rate"] = decay_rate
4869
        new_booster = Booster(new_params, train_set)
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        # Copy models
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        _safe_call(
            _LIB.LGBM_BoosterMerge(
                new_booster._handle,
                predictor._handle,
            )
        )
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        leaf_preds = leaf_preds.reshape(-1)
4878
        ptr_data, _, _ = _c_int_array(leaf_preds)
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        _safe_call(
            _LIB.LGBM_BoosterRefit(
                new_booster._handle,
                ptr_data,
                ctypes.c_int32(nrow),
                ctypes.c_int32(ncol),
            )
        )
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        new_booster._network = self._network
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        return new_booster

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    def get_leaf_output(self, tree_id: int, leaf_id: int) -> float:
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        """Get the output of a leaf.

        Parameters
        ----------
        tree_id : int
            The index of the tree.
        leaf_id : int
            The index of the leaf in the tree.

        Returns
        -------
        result : float
            The output of the leaf.
        """
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        ret = ctypes.c_double(0)
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        _safe_call(
            _LIB.LGBM_BoosterGetLeafValue(
                self._handle,
                ctypes.c_int(tree_id),
                ctypes.c_int(leaf_id),
                ctypes.byref(ret),
            )
        )
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        return ret.value

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    def set_leaf_output(
        self,
        tree_id: int,
        leaf_id: int,
        value: float,
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    ) -> "Booster":
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        """Set the output of a leaf.

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        .. versionadded:: 4.0.0

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        Parameters
        ----------
        tree_id : int
            The index of the tree.
        leaf_id : int
            The index of the leaf in the tree.
        value : float
            Value to set as the output of the leaf.

        Returns
        -------
        self : Booster
            Booster with the leaf output set.
        """
        _safe_call(
            _LIB.LGBM_BoosterSetLeafValue(
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                self._handle,
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                ctypes.c_int(tree_id),
                ctypes.c_int(leaf_id),
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                ctypes.c_double(value),
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            )
        )
        return self

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    def num_feature(self) -> int:
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        """Get number of features.

        Returns
        -------
        num_feature : int
            The number of features.
        """
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        out_num_feature = ctypes.c_int(0)
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        _safe_call(
            _LIB.LGBM_BoosterGetNumFeature(
                self._handle,
                ctypes.byref(out_num_feature),
            )
        )
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        return out_num_feature.value

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    def feature_name(self) -> List[str]:
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        """Get names of features.
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        Returns
        -------
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        result : list of str
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            List with names of features.
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        """
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        num_feature = self.num_feature()
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        # Get name of features
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        tmp_out_len = ctypes.c_int(0)
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        reserved_string_buffer_size = 255
        required_string_buffer_size = ctypes.c_size_t(0)
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        string_buffers = [ctypes.create_string_buffer(reserved_string_buffer_size) for _ in range(num_feature)]
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        ptr_string_buffers = (ctypes.c_char_p * num_feature)(*map(ctypes.addressof, string_buffers))  # type: ignore[misc]
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        _safe_call(
            _LIB.LGBM_BoosterGetFeatureNames(
                self._handle,
                ctypes.c_int(num_feature),
                ctypes.byref(tmp_out_len),
                ctypes.c_size_t(reserved_string_buffer_size),
                ctypes.byref(required_string_buffer_size),
                ptr_string_buffers,
            )
        )
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        if num_feature != tmp_out_len.value:
            raise ValueError("Length of feature names doesn't equal with num_feature")
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        actual_string_buffer_size = required_string_buffer_size.value
        # if buffer length is not long enough, reallocate buffers
        if reserved_string_buffer_size < actual_string_buffer_size:
            string_buffers = [ctypes.create_string_buffer(actual_string_buffer_size) for _ in range(num_feature)]
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            ptr_string_buffers = (ctypes.c_char_p * num_feature)(*map(ctypes.addressof, string_buffers))  # type: ignore[misc]
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            _safe_call(
                _LIB.LGBM_BoosterGetFeatureNames(
                    self._handle,
                    ctypes.c_int(num_feature),
                    ctypes.byref(tmp_out_len),
                    ctypes.c_size_t(actual_string_buffer_size),
                    ctypes.byref(required_string_buffer_size),
                    ptr_string_buffers,
                )
            )
        return [string_buffers[i].value.decode("utf-8") for i in range(num_feature)]
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    def feature_importance(
        self,
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        importance_type: str = "split",
        iteration: Optional[int] = None,
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    ) -> np.ndarray:
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        """Get feature importances.
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        Parameters
        ----------
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        importance_type : str, optional (default="split")
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            How the importance is calculated.
            If "split", result contains numbers of times the feature is used in a model.
            If "gain", result contains total gains of splits which use the feature.
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        iteration : int or None, optional (default=None)
            Limit number of iterations in the feature importance calculation.
            If None, if the best iteration exists, it is used; otherwise, all trees are used.
            If <= 0, all trees are used (no limits).
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        Returns
        -------
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        result : numpy array
            Array with feature importances.
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        """
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        if iteration is None:
            iteration = self.best_iteration
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        importance_type_int = _FEATURE_IMPORTANCE_TYPE_MAPPER[importance_type]
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        result = np.empty(self.num_feature(), dtype=np.float64)
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        _safe_call(
            _LIB.LGBM_BoosterFeatureImportance(
                self._handle,
                ctypes.c_int(iteration),
                ctypes.c_int(importance_type_int),
                result.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
            )
        )
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        if importance_type_int == _C_API_FEATURE_IMPORTANCE_SPLIT:
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            return result.astype(np.int32)
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        else:
            return result
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    def get_split_value_histogram(
        self,
        feature: Union[int, str],
        bins: Optional[Union[int, str]] = None,
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        xgboost_style: bool = False,
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    ) -> Union[Tuple[np.ndarray, np.ndarray], np.ndarray, pd_DataFrame]:
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        """Get split value histogram for the specified feature.

        Parameters
        ----------
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        feature : int or str
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            The feature name or index the histogram is calculated for.
            If int, interpreted as index.
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            If str, interpreted as name.
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            .. warning::

                Categorical features are not supported.
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        bins : int, str or None, optional (default=None)
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            The maximum number of bins.
            If None, or int and > number of unique split values and ``xgboost_style=True``,
            the number of bins equals number of unique split values.
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            If str, it should be one from the list of the supported values by ``numpy.histogram()`` function.
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        xgboost_style : bool, optional (default=False)
            Whether the returned result should be in the same form as it is in XGBoost.
            If False, the returned value is tuple of 2 numpy arrays as it is in ``numpy.histogram()`` function.
            If True, the returned value is matrix, in which the first column is the right edges of non-empty bins
            and the second one is the histogram values.

        Returns
        -------
        result_tuple : tuple of 2 numpy arrays
            If ``xgboost_style=False``, the values of the histogram of used splitting values for the specified feature
            and the bin edges.
        result_array_like : numpy array or pandas DataFrame (if pandas is installed)
            If ``xgboost_style=True``, the histogram of used splitting values for the specified feature.
        """
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        def add(root: Dict[str, Any]) -> None:
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            """Recursively add thresholds."""
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            if "split_index" in root:  # non-leaf
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                if feature_names is not None and isinstance(feature, str):
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                    split_feature = feature_names[root["split_feature"]]
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                else:
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                    split_feature = root["split_feature"]
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                if split_feature == feature:
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                    if isinstance(root["threshold"], str):
                        raise LightGBMError("Cannot compute split value histogram for the categorical feature")
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                    values.append(root["threshold"])
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                add(root["left_child"])
                add(root["right_child"])
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        model = self.dump_model()
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        feature_names = model.get("feature_names")
        tree_infos = model["tree_info"]
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        values: List[float] = []
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        for tree_info in tree_infos:
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            add(tree_info["tree_structure"])
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        if bins is None or isinstance(bins, int) and xgboost_style:
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            n_unique = len(np.unique(values))
            bins = max(min(n_unique, bins) if bins is not None else n_unique, 1)
        hist, bin_edges = np.histogram(values, bins=bins)
        if xgboost_style:
            ret = np.column_stack((bin_edges[1:], hist))
            ret = ret[ret[:, 1] > 0]
            if PANDAS_INSTALLED:
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                return pd_DataFrame(ret, columns=["SplitValue", "Count"])
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            else:
                return ret
        else:
            return hist, bin_edges

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    def __inner_eval(
        self,
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        *,
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        data_name: str,
        data_idx: int,
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        feval: Optional[Union[_LGBM_CustomEvalFunction, List[_LGBM_CustomEvalFunction]]],
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    ) -> List[_LGBM_BoosterEvalMethodResultType]:
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        """Evaluate training or validation data."""
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        if data_idx >= self.__num_dataset:
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            raise ValueError("Data_idx should be smaller than number of dataset")
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        self.__get_eval_info()
        ret = []
        if self.__num_inner_eval > 0:
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            result = np.empty(self.__num_inner_eval, dtype=np.float64)
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            tmp_out_len = ctypes.c_int(0)
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            _safe_call(
                _LIB.LGBM_BoosterGetEval(
                    self._handle,
                    ctypes.c_int(data_idx),
                    ctypes.byref(tmp_out_len),
                    result.ctypes.data_as(ctypes.POINTER(ctypes.c_double)),
                )
            )
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            if tmp_out_len.value != self.__num_inner_eval:
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                raise ValueError("Wrong length of eval results")
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            for i in range(self.__num_inner_eval):
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                ret.append((data_name, self.__name_inner_eval[i], result[i], self.__higher_better_inner_eval[i]))
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        if callable(feval):
            feval = [feval]
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        if feval is not None:
            if data_idx == 0:
                cur_data = self.train_set
            else:
                cur_data = self.valid_sets[data_idx - 1]
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            for eval_function in feval:
                if eval_function is None:
                    continue
                feval_ret = eval_function(self.__inner_predict(data_idx), cur_data)
                if isinstance(feval_ret, list):
                    for eval_name, val, is_higher_better in feval_ret:
                        ret.append((data_name, eval_name, val, is_higher_better))
                else:
                    eval_name, val, is_higher_better = feval_ret
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                    ret.append((data_name, eval_name, val, is_higher_better))
        return ret

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    def __inner_predict(self, data_idx: int) -> np.ndarray:
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        """Predict for training and validation dataset."""
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        if data_idx >= self.__num_dataset:
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            raise ValueError("Data_idx should be smaller than number of dataset")
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        if self.__inner_predict_buffer[data_idx] is None:
            if data_idx == 0:
                n_preds = self.train_set.num_data() * self.__num_class
            else:
                n_preds = self.valid_sets[data_idx - 1].num_data() * self.__num_class
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            self.__inner_predict_buffer[data_idx] = np.empty(n_preds, dtype=np.float64)
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        # avoid to predict many time in one iteration
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        if not self.__is_predicted_cur_iter[data_idx]:
            tmp_out_len = ctypes.c_int64(0)
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            data_ptr = self.__inner_predict_buffer[data_idx].ctypes.data_as(ctypes.POINTER(ctypes.c_double))  # type: ignore[union-attr]
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            _safe_call(
                _LIB.LGBM_BoosterGetPredict(
                    self._handle,
                    ctypes.c_int(data_idx),
                    ctypes.byref(tmp_out_len),
                    data_ptr,
                )
            )
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            if tmp_out_len.value != len(self.__inner_predict_buffer[data_idx]):  # type: ignore[arg-type]
5194
                raise ValueError(f"Wrong length of predict results for data {data_idx}")
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            self.__is_predicted_cur_iter[data_idx] = True
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        result: np.ndarray = self.__inner_predict_buffer[data_idx]  # type: ignore[assignment]
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        if self.__num_class > 1:
            num_data = result.size // self.__num_class
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            result = result.reshape(num_data, self.__num_class, order="F")
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        return result
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5202
    def __get_eval_info(self) -> None:
5203
        """Get inner evaluation count and names."""
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        if self.__need_reload_eval_info:
            self.__need_reload_eval_info = False
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            out_num_eval = ctypes.c_int(0)
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            # Get num of inner evals
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            _safe_call(
                _LIB.LGBM_BoosterGetEvalCounts(
                    self._handle,
                    ctypes.byref(out_num_eval),
                )
            )
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            self.__num_inner_eval = out_num_eval.value
            if self.__num_inner_eval > 0:
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                # Get name of eval metrics
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                tmp_out_len = ctypes.c_int(0)
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                reserved_string_buffer_size = 255
                required_string_buffer_size = ctypes.c_size_t(0)
                string_buffers = [
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                    ctypes.create_string_buffer(reserved_string_buffer_size) for _ in range(self.__num_inner_eval)
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                ]
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                ptr_string_buffers = (ctypes.c_char_p * self.__num_inner_eval)(*map(ctypes.addressof, string_buffers))  # type: ignore[misc]
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                _safe_call(
                    _LIB.LGBM_BoosterGetEvalNames(
                        self._handle,
                        ctypes.c_int(self.__num_inner_eval),
                        ctypes.byref(tmp_out_len),
                        ctypes.c_size_t(reserved_string_buffer_size),
                        ctypes.byref(required_string_buffer_size),
                        ptr_string_buffers,
                    )
                )
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                if self.__num_inner_eval != tmp_out_len.value:
5235
                    raise ValueError("Length of eval names doesn't equal with num_evals")
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                actual_string_buffer_size = required_string_buffer_size.value
                # if buffer length is not long enough, reallocate buffers
                if reserved_string_buffer_size < actual_string_buffer_size:
                    string_buffers = [
                        ctypes.create_string_buffer(actual_string_buffer_size) for _ in range(self.__num_inner_eval)
                    ]
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                    ptr_string_buffers = (ctypes.c_char_p * self.__num_inner_eval)(
                        *map(ctypes.addressof, string_buffers)
                    )  # type: ignore[misc]
                    _safe_call(
                        _LIB.LGBM_BoosterGetEvalNames(
                            self._handle,
                            ctypes.c_int(self.__num_inner_eval),
                            ctypes.byref(tmp_out_len),
                            ctypes.c_size_t(actual_string_buffer_size),
                            ctypes.byref(required_string_buffer_size),
                            ptr_string_buffers,
                        )
                    )
                self.__name_inner_eval = [string_buffers[i].value.decode("utf-8") for i in range(self.__num_inner_eval)]
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                self.__higher_better_inner_eval = [
5257
                    name.startswith(("auc", "ndcg@", "map@", "average_precision")) for name in self.__name_inner_eval
5258
                ]