test_sampling.py 26.4 KB
Newer Older
1
2
3
4
import dgl
import backend as F
import numpy as np
import unittest
5
from collections import defaultdict
6
7
8
9
10
11
12
13
14
15
16
17
18
19

def check_random_walk(g, metapath, traces, ntypes, prob=None):
    traces = F.asnumpy(traces)
    ntypes = F.asnumpy(ntypes)
    for j in range(traces.shape[1] - 1):
        assert ntypes[j] == g.get_ntype_id(g.to_canonical_etype(metapath[j])[0])
        assert ntypes[j + 1] == g.get_ntype_id(g.to_canonical_etype(metapath[j])[2])

    for i in range(traces.shape[0]):
        for j in range(traces.shape[1] - 1):
            assert g.has_edge_between(
                traces[i, j], traces[i, j+1], etype=metapath[j])
            if prob is not None and prob in g.edges[metapath[j]].data:
                p = F.asnumpy(g.edges[metapath[j]].data['p'])
20
                eids = g.edge_ids(traces[i, j], traces[i, j+1], etype=metapath[j])
21
22
23
24
25
                assert p[eids] != 0

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU random walk not implemented")
def test_random_walk():
    g1 = dgl.heterograph({
26
        ('user', 'follow', 'user'): ([0, 1, 2], [1, 2, 0])
27
28
        })
    g2 = dgl.heterograph({
29
        ('user', 'follow', 'user'): ([0, 1, 1, 2, 3], [1, 2, 3, 0, 0])
30
31
        })
    g3 = dgl.heterograph({
32
33
34
        ('user', 'follow', 'user'): ([0, 1, 2], [1, 2, 0]),
        ('user', 'view', 'item'): ([0, 1, 2], [0, 1, 2]),
        ('item', 'viewed-by', 'user'): ([0, 1, 2], [0, 1, 2])})
35
    g4 = dgl.heterograph({
36
37
38
        ('user', 'follow', 'user'): ([0, 1, 1, 2, 3], [1, 2, 3, 0, 0]),
        ('user', 'view', 'item'): ([0, 0, 1, 2, 3, 3], [0, 1, 1, 2, 2, 1]),
        ('item', 'viewed-by', 'user'): ([0, 1, 1, 2, 2, 1], [0, 0, 1, 2, 3, 3])})
39
40

    g2.edata['p'] = F.tensor([3, 0, 3, 3, 3], dtype=F.float32)
41
    g2.edata['p2'] = F.tensor([[3], [0], [3], [3], [3]], dtype=F.float32)
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
    g4.edges['follow'].data['p'] = F.tensor([3, 0, 3, 3, 3], dtype=F.float32)
    g4.edges['viewed-by'].data['p'] = F.tensor([1, 1, 1, 1, 1, 1], dtype=F.float32)

    traces, ntypes = dgl.sampling.random_walk(g1, [0, 1, 2, 0, 1, 2], length=4)
    check_random_walk(g1, ['follow'] * 4, traces, ntypes)
    traces, ntypes = dgl.sampling.random_walk(g1, [0, 1, 2, 0, 1, 2], length=4, restart_prob=0.)
    check_random_walk(g1, ['follow'] * 4, traces, ntypes)
    traces, ntypes = dgl.sampling.random_walk(
        g1, [0, 1, 2, 0, 1, 2], length=4, restart_prob=F.zeros((4,), F.float32, F.cpu()))
    check_random_walk(g1, ['follow'] * 4, traces, ntypes)
    traces, ntypes = dgl.sampling.random_walk(
        g1, [0, 1, 2, 0, 1, 2], length=5,
        restart_prob=F.tensor([0, 0, 0, 0, 1], dtype=F.float32))
    check_random_walk(
        g1, ['follow'] * 4, F.slice_axis(traces, 1, 0, 5), F.slice_axis(ntypes, 0, 0, 5))
    assert (F.asnumpy(traces)[:, 5] == -1).all()

    traces, ntypes = dgl.sampling.random_walk(
        g2, [0, 1, 2, 3, 0, 1, 2, 3], length=4)
    check_random_walk(g2, ['follow'] * 4, traces, ntypes)

    traces, ntypes = dgl.sampling.random_walk(
        g2, [0, 1, 2, 3, 0, 1, 2, 3], length=4, prob='p')
    check_random_walk(g2, ['follow'] * 4, traces, ntypes, 'p')

67
68
69
70
71
72
73
74
    try:
        traces, ntypes = dgl.sampling.random_walk(
            g2, [0, 1, 2, 3, 0, 1, 2, 3], length=4, prob='p2')
        fail = False
    except dgl.DGLError:
        fail = True
    assert fail

75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
    metapath = ['follow', 'view', 'viewed-by'] * 2
    traces, ntypes = dgl.sampling.random_walk(
        g3, [0, 1, 2, 0, 1, 2], metapath=metapath)
    check_random_walk(g3, metapath, traces, ntypes)

    metapath = ['follow', 'view', 'viewed-by'] * 2
    traces, ntypes = dgl.sampling.random_walk(
        g4, [0, 1, 2, 3, 0, 1, 2, 3], metapath=metapath)
    check_random_walk(g4, metapath, traces, ntypes)

    metapath = ['follow', 'view', 'viewed-by'] * 2
    traces, ntypes = dgl.sampling.random_walk(
        g4, [0, 1, 2, 3, 0, 1, 2, 3], metapath=metapath, prob='p')
    check_random_walk(g4, metapath, traces, ntypes, 'p')
    traces, ntypes = dgl.sampling.random_walk(
        g4, [0, 1, 2, 3, 0, 1, 2, 3], metapath=metapath, prob='p', restart_prob=0.)
    check_random_walk(g4, metapath, traces, ntypes, 'p')
    traces, ntypes = dgl.sampling.random_walk(
        g4, [0, 1, 2, 3, 0, 1, 2, 3], metapath=metapath, prob='p',
        restart_prob=F.zeros((6,), F.float32, F.cpu()))
    check_random_walk(g4, metapath, traces, ntypes, 'p')
    traces, ntypes = dgl.sampling.random_walk(
        g4, [0, 1, 2, 3, 0, 1, 2, 3], metapath=metapath + ['follow'], prob='p',
        restart_prob=F.tensor([0, 0, 0, 0, 0, 0, 1], F.float32))
    check_random_walk(g4, metapath, traces[:, :7], ntypes[:7], 'p')
    assert (F.asnumpy(traces[:, 7]) == -1).all()

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU pack traces not implemented")
def test_pack_traces():
    traces, types = (np.array(
        [[ 0,  1, -1, -1, -1, -1, -1],
         [ 0,  1,  1,  3,  0,  0,  0]], dtype='int64'),
        np.array([0, 0, 1, 0, 0, 1, 0], dtype='int64'))
    traces = F.zerocopy_from_numpy(traces)
    types = F.zerocopy_from_numpy(types)
    result = dgl.sampling.pack_traces(traces, types)
    assert F.array_equal(result[0], F.tensor([0, 1, 0, 1, 1, 3, 0, 0, 0], dtype=F.int64))
    assert F.array_equal(result[1], F.tensor([0, 0, 0, 0, 1, 0, 0, 1, 0], dtype=F.int64))
    assert F.array_equal(result[2], F.tensor([2, 7], dtype=F.int64))
    assert F.array_equal(result[3], F.tensor([0, 2], dtype=F.int64))

116
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU not implemented")
117
118
119
120
121
122
123
124
125
126
def test_pinsage_sampling():
    def _test_sampler(g, sampler, ntype):
        neighbor_g = sampler(F.tensor([0, 2], dtype=F.int64))
        assert neighbor_g.ntypes == [ntype]
        u, v = neighbor_g.all_edges(form='uv', order='eid')
        uv = list(zip(F.asnumpy(u).tolist(), F.asnumpy(v).tolist()))
        assert (1, 0) in uv or (0, 0) in uv
        assert (2, 2) in uv or (3, 2) in uv

    g = dgl.heterograph({
127
128
        ('item', 'bought-by', 'user'): ([0, 0, 1, 1, 2, 2, 3, 3], [0, 1, 0, 1, 2, 3, 2, 3]),
        ('user', 'bought', 'item'): ([0, 1, 0, 1, 2, 3, 2, 3], [0, 0, 1, 1, 2, 2, 3, 3])})
129
130
131
132
133
134
135
    sampler = dgl.sampling.PinSAGESampler(g, 'item', 'user', 4, 0.5, 3, 2)
    _test_sampler(g, sampler, 'item')
    sampler = dgl.sampling.RandomWalkNeighborSampler(g, 4, 0.5, 3, 2, ['bought-by', 'bought'])
    _test_sampler(g, sampler, 'item')
    sampler = dgl.sampling.RandomWalkNeighborSampler(g, 4, 0.5, 3, 2, 
        [('item', 'bought-by', 'user'), ('user', 'bought', 'item')])
    _test_sampler(g, sampler, 'item')
136
137
    g = dgl.graph(([0, 0, 1, 1, 2, 2, 3, 3],
                   [0, 1, 0, 1, 2, 3, 2, 3]))
138
139
140
    sampler = dgl.sampling.RandomWalkNeighborSampler(g, 4, 0.5, 3, 2)
    _test_sampler(g, sampler, g.ntypes[0])
    g = dgl.heterograph({
141
142
143
        ('A', 'AB', 'B'): ([0, 2], [1, 3]),
        ('B', 'BC', 'C'): ([1, 3], [2, 1]),
        ('C', 'CA', 'A'): ([2, 1], [0, 2])})
144
145
146
    sampler = dgl.sampling.RandomWalkNeighborSampler(g, 4, 0.5, 3, 2, ['AB', 'BC', 'CA'])
    _test_sampler(g, sampler, 'A')

147
148
149
150
def _gen_neighbor_sampling_test_graph(hypersparse, reverse):
    if hypersparse:
        # should crash if allocated a CSR
        card = 1 << 50
151
        num_nodes_dict = {'user': card, 'game': card, 'coin': card}
152
153
    else:
        card = None
154
155
        num_nodes_dict = None

156
    if reverse:
157
158
159
        g = dgl.heterograph({
            ('user', 'follow', 'user'): ([0, 0, 0, 1, 1, 1, 2], [1, 2, 3, 0, 2, 3, 0])
        }, {'user': card if card is not None else 4})
160
        g.edata['prob'] = F.tensor([.5, .5, 0., .5, .5, 0., 1.], dtype=F.float32)
161
162
163
164
165
166
167
        hg = dgl.heterograph({
            ('user', 'follow', 'user'): ([0, 0, 0, 1, 1, 1, 2],
                                         [1, 2, 3, 0, 2, 3, 0]),
            ('game', 'play', 'user'): ([0, 1, 2, 2], [0, 0, 1, 3]),
            ('user', 'liked-by', 'game'): ([0, 1, 2, 0, 3, 0], [2, 2, 2, 1, 1, 0]),
            ('coin', 'flips', 'user'): ([0, 0, 0, 0], [0, 1, 2, 3])
        }, num_nodes_dict)
168
    else:
169
170
171
        g = dgl.heterograph({
            ('user', 'follow', 'user'): ([1, 2, 3, 0, 2, 3, 0], [0, 0, 0, 1, 1, 1, 2])
        }, {'user': card if card is not None else 4})
172
        g.edata['prob'] = F.tensor([.5, .5, 0., .5, .5, 0., 1.], dtype=F.float32)
173
174
175
176
177
178
179
180
181
182
        hg = dgl.heterograph({
            ('user', 'follow', 'user'): ([1, 2, 3, 0, 2, 3, 0],
                                         [0, 0, 0, 1, 1, 1, 2]),
            ('user', 'play', 'game'): ([0, 0, 1, 3], [0, 1, 2, 2]),
            ('game', 'liked-by', 'user'): ([2, 2, 2, 1, 1, 0], [0, 1, 2, 0, 3, 0]),
            ('user', 'flips', 'coin'): ([0, 1, 2, 3], [0, 0, 0, 0])
        }, num_nodes_dict)
    hg.edges['follow'].data['prob'] = F.tensor([.5, .5, 0., .5, .5, 0., 1.], dtype=F.float32)
    hg.edges['play'].data['prob'] = F.tensor([.8, .5, .5, .5], dtype=F.float32)
    hg.edges['liked-by'].data['prob'] = F.tensor([.3, .5, .2, .5, .1, .1], dtype=F.float32)
183
184
185
186
187
188
189
190
191

    return g, hg

def _gen_neighbor_topk_test_graph(hypersparse, reverse):
    if hypersparse:
        # should crash if allocated a CSR
        card = 1 << 50
    else:
        card = None
192

193
    if reverse:
194
195
196
        g = dgl.heterograph({
            ('user', 'follow', 'user'): ([0, 0, 0, 1, 1, 1, 2], [1, 2, 3, 0, 2, 3, 0])
        })
197
        g.edata['weight'] = F.tensor([.5, .3, 0., -5., 22., 0., 1.], dtype=F.float32)
198
199
200
201
202
203
204
        hg = dgl.heterograph({
            ('user', 'follow', 'user'): ([0, 0, 0, 1, 1, 1, 2],
                                         [1, 2, 3, 0, 2, 3, 0]),
            ('game', 'play', 'user'): ([0, 1, 2, 2], [0, 0, 1, 3]),
            ('user', 'liked-by', 'game'): ([0, 1, 2, 0, 3, 0], [2, 2, 2, 1, 1, 0]),
            ('coin', 'flips', 'user'): ([0, 0, 0, 0], [0, 1, 2, 3])
        })
205
    else:
206
207
208
        g = dgl.heterograph({
            ('user', 'follow', 'user'): ([1, 2, 3, 0, 2, 3, 0], [0, 0, 0, 1, 1, 1, 2])
        })
209
        g.edata['weight'] = F.tensor([.5, .3, 0., -5., 22., 0., 1.], dtype=F.float32)
210
211
212
213
214
215
216
217
218
219
220
        hg = dgl.heterograph({
            ('user', 'follow', 'user'): ([1, 2, 3, 0, 2, 3, 0],
                                         [0, 0, 0, 1, 1, 1, 2]),
            ('user', 'play', 'game'): ([0, 0, 1, 3], [0, 1, 2, 2]),
            ('game', 'liked-by', 'user'): ([2, 2, 2, 1, 1, 0], [0, 1, 2, 0, 3, 0]),
            ('user', 'flips', 'coin'): ([0, 1, 2, 3], [0, 0, 0, 0])
        })
    hg.edges['follow'].data['weight'] = F.tensor([.5, .3, 0., -5., 22., 0., 1.], dtype=F.float32)
    hg.edges['play'].data['weight'] = F.tensor([.8, .5, .4, .5], dtype=F.float32)
    hg.edges['liked-by'].data['weight'] = F.tensor([.3, .5, .2, .5, .1, .1], dtype=F.float32)
    hg.edges['flips'].data['weight'] = F.tensor([10, 2, 13, -1], dtype=F.float32)
221
222
223
224
225
226
    return g, hg

def _test_sample_neighbors(hypersparse):
    g, hg = _gen_neighbor_sampling_test_graph(hypersparse, False)

    def _test1(p, replace):
227
228
229
230
231
232
233
234
        subg = dgl.sampling.sample_neighbors(g, [0, 1], -1, prob=p, replace=replace)
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.in_edges([0, 1])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

235
236
237
238
239
240
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(g, [0, 1], 2, prob=p, replace=replace)
            assert subg.number_of_nodes() == g.number_of_nodes()
            assert subg.number_of_edges() == 4
            u, v = subg.edges()
            assert set(F.asnumpy(F.unique(v))) == {0, 1}
241
            assert F.array_equal(F.astype(g.has_edges_between(u, v), F.int64), F.ones((4,), dtype=F.int64))
242
243
244
245
246
247
248
249
250
251
252
253
254
255
            assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
            edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
            if not replace:
                # check no duplication
                assert len(edge_set) == 4
            if p is not None:
                assert not (3, 0) in edge_set
                assert not (3, 1) in edge_set
    _test1(None, True)   # w/ replacement, uniform
    _test1(None, False)  # w/o replacement, uniform
    _test1('prob', True)   # w/ replacement
    _test1('prob', False)  # w/o replacement

    def _test2(p, replace):  # fanout > #neighbors
256
257
258
259
260
261
262
263
        subg = dgl.sampling.sample_neighbors(g, [0, 2], -1, prob=p, replace=replace)
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.in_edges([0, 2])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

264
265
266
267
268
269
270
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(g, [0, 2], 2, prob=p, replace=replace)
            assert subg.number_of_nodes() == g.number_of_nodes()
            num_edges = 4 if replace else 3
            assert subg.number_of_edges() == num_edges
            u, v = subg.edges()
            assert set(F.asnumpy(F.unique(v))) == {0, 2}
271
            assert F.array_equal(F.astype(g.has_edges_between(u, v), F.int64), F.ones((num_edges,), dtype=F.int64))
272
273
274
275
276
277
278
279
280
281
282
283
284
            assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
            edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
            if not replace:
                # check no duplication
                assert len(edge_set) == num_edges
            if p is not None:
                assert not (3, 0) in edge_set
    _test2(None, True)   # w/ replacement, uniform
    _test2(None, False)  # w/o replacement, uniform
    _test2('prob', True)   # w/ replacement
    _test2('prob', False)  # w/o replacement

    def _test3(p, replace):
285
286
287
288
289
290
291
292
        subg = dgl.sampling.sample_neighbors(hg, {'user': [0, 1], 'game': 0}, -1, prob=p, replace=replace)
        assert len(subg.ntypes) == 3
        assert len(subg.etypes) == 4
        assert subg['follow'].number_of_edges() == 6
        assert subg['play'].number_of_edges() == 1
        assert subg['liked-by'].number_of_edges() == 4
        assert subg['flips'].number_of_edges() == 0

293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(hg, {'user' : [0,1], 'game' : 0}, 2, prob=p, replace=replace)
            assert len(subg.ntypes) == 3
            assert len(subg.etypes) == 4
            assert subg['follow'].number_of_edges() == 4
            assert subg['play'].number_of_edges() == 2 if replace else 1
            assert subg['liked-by'].number_of_edges() == 4 if replace else 3
            assert subg['flips'].number_of_edges() == 0

    _test3(None, True)   # w/ replacement, uniform
    _test3(None, False)  # w/o replacement, uniform
    _test3('prob', True)   # w/ replacement
    _test3('prob', False)  # w/o replacement

    # test different fanouts for different relations
    for i in range(10):
309
310
        subg = dgl.sampling.sample_neighbors(
            hg,
311
312
            {'user' : [0,1], 'game' : 0, 'coin': 0},
            {'follow': 1, 'play': 2, 'liked-by': 0, 'flips': -1},
313
            replace=True)
314
315
316
317
318
        assert len(subg.ntypes) == 3
        assert len(subg.etypes) == 4
        assert subg['follow'].number_of_edges() == 2
        assert subg['play'].number_of_edges() == 2
        assert subg['liked-by'].number_of_edges() == 0
319
        assert subg['flips'].number_of_edges() == 4
320
321
322
323
324

def _test_sample_neighbors_outedge(hypersparse):
    g, hg = _gen_neighbor_sampling_test_graph(hypersparse, True)

    def _test1(p, replace):
325
326
327
328
329
330
331
332
        subg = dgl.sampling.sample_neighbors(g, [0, 1], -1, prob=p, replace=replace, edge_dir='out')
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.out_edges([0, 1])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

333
334
335
336
337
338
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(g, [0, 1], 2, prob=p, replace=replace, edge_dir='out')
            assert subg.number_of_nodes() == g.number_of_nodes()
            assert subg.number_of_edges() == 4
            u, v = subg.edges()
            assert set(F.asnumpy(F.unique(u))) == {0, 1}
339
            assert F.array_equal(F.astype(g.has_edges_between(u, v), F.int64), F.ones((4,), dtype=F.int64))
340
341
342
343
344
345
346
347
348
349
350
351
352
353
            assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
            edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
            if not replace:
                # check no duplication
                assert len(edge_set) == 4
            if p is not None:
                assert not (0, 3) in edge_set
                assert not (1, 3) in edge_set
    _test1(None, True)   # w/ replacement, uniform
    _test1(None, False)  # w/o replacement, uniform
    _test1('prob', True)   # w/ replacement
    _test1('prob', False)  # w/o replacement

    def _test2(p, replace):  # fanout > #neighbors
354
355
356
357
358
359
360
361
        subg = dgl.sampling.sample_neighbors(g, [0, 2], -1, prob=p, replace=replace, edge_dir='out')
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.out_edges([0, 2])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

362
363
364
365
366
367
368
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(g, [0, 2], 2, prob=p, replace=replace, edge_dir='out')
            assert subg.number_of_nodes() == g.number_of_nodes()
            num_edges = 4 if replace else 3
            assert subg.number_of_edges() == num_edges
            u, v = subg.edges()
            assert set(F.asnumpy(F.unique(u))) == {0, 2}
369
            assert F.array_equal(F.astype(g.has_edges_between(u, v), F.int64), F.ones((num_edges,), dtype=F.int64))
370
371
372
373
374
375
376
377
378
379
380
381
382
            assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
            edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
            if not replace:
                # check no duplication
                assert len(edge_set) == num_edges
            if p is not None:
                assert not (0, 3) in edge_set
    _test2(None, True)   # w/ replacement, uniform
    _test2(None, False)  # w/o replacement, uniform
    _test2('prob', True)   # w/ replacement
    _test2('prob', False)  # w/o replacement

    def _test3(p, replace):
383
384
385
386
387
388
389
390
        subg = dgl.sampling.sample_neighbors(hg, {'user': [0, 1], 'game': 0}, -1, prob=p, replace=replace, edge_dir='out')
        assert len(subg.ntypes) == 3
        assert len(subg.etypes) == 4
        assert subg['follow'].number_of_edges() == 6
        assert subg['play'].number_of_edges() == 1
        assert subg['liked-by'].number_of_edges() == 4
        assert subg['flips'].number_of_edges() == 0

391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
        for i in range(10):
            subg = dgl.sampling.sample_neighbors(hg, {'user' : [0,1], 'game' : 0}, 2, prob=p, replace=replace, edge_dir='out')
            assert len(subg.ntypes) == 3
            assert len(subg.etypes) == 4
            assert subg['follow'].number_of_edges() == 4
            assert subg['play'].number_of_edges() == 2 if replace else 1
            assert subg['liked-by'].number_of_edges() == 4 if replace else 3
            assert subg['flips'].number_of_edges() == 0

    _test3(None, True)   # w/ replacement, uniform
    _test3(None, False)  # w/o replacement, uniform
    _test3('prob', True)   # w/ replacement
    _test3('prob', False)  # w/o replacement

def _test_sample_neighbors_topk(hypersparse):
    g, hg = _gen_neighbor_topk_test_graph(hypersparse, False)

    def _test1():
409
410
411
412
413
414
415
416
        subg = dgl.sampling.select_topk(g, -1, 'weight', [0, 1])
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.in_edges([0, 1])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

417
        subg = dgl.sampling.select_topk(g, 2, 'weight', [0, 1])
418
419
420
421
422
423
424
425
426
        assert subg.number_of_nodes() == g.number_of_nodes()
        assert subg.number_of_edges() == 4
        u, v = subg.edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
        assert edge_set == {(2,0),(1,0),(2,1),(3,1)}
    _test1()

    def _test2():  # k > #neighbors
427
428
429
430
431
432
433
434
        subg = dgl.sampling.select_topk(g, -1, 'weight', [0, 2])
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.in_edges([0, 2])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

435
        subg = dgl.sampling.select_topk(g, 2, 'weight', [0, 2])
436
437
438
439
440
441
442
443
444
        assert subg.number_of_nodes() == g.number_of_nodes()
        assert subg.number_of_edges() == 3
        u, v = subg.edges()
        assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert edge_set == {(2,0),(1,0),(0,2)}
    _test2()

    def _test3():
445
        subg = dgl.sampling.select_topk(hg, 2, 'weight', {'user' : [0,1], 'game' : 0})
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
        assert len(subg.ntypes) == 3
        assert len(subg.etypes) == 4
        u, v = subg['follow'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['follow'].edge_ids(u, v), subg['follow'].edata[dgl.EID])
        assert edge_set == {(2,0),(1,0),(2,1),(3,1)}
        u, v = subg['play'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['play'].edge_ids(u, v), subg['play'].edata[dgl.EID])
        assert edge_set == {(0,0)}
        u, v = subg['liked-by'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['liked-by'].edge_ids(u, v), subg['liked-by'].edata[dgl.EID])
        assert edge_set == {(2,0),(2,1),(1,0)}
        assert subg['flips'].number_of_edges() == 0
    _test3()

    # test different k for different relations
464
    subg = dgl.sampling.select_topk(
465
        hg, {'follow': 1, 'play': 2, 'liked-by': 0, 'flips': -1}, 'weight', {'user' : [0,1], 'game' : 0, 'coin': 0})
466
467
468
469
470
    assert len(subg.ntypes) == 3
    assert len(subg.etypes) == 4
    assert subg['follow'].number_of_edges() == 2
    assert subg['play'].number_of_edges() == 1
    assert subg['liked-by'].number_of_edges() == 0
471
    assert subg['flips'].number_of_edges() == 4
472
473
474
475
476

def _test_sample_neighbors_topk_outedge(hypersparse):
    g, hg = _gen_neighbor_topk_test_graph(hypersparse, True)

    def _test1():
477
478
479
480
481
482
483
484
        subg = dgl.sampling.select_topk(g, -1, 'weight', [0, 1], edge_dir='out')
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.out_edges([0, 1])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

485
        subg = dgl.sampling.select_topk(g, 2, 'weight', [0, 1], edge_dir='out')
486
487
488
489
490
491
492
493
494
        assert subg.number_of_nodes() == g.number_of_nodes()
        assert subg.number_of_edges() == 4
        u, v = subg.edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
        assert edge_set == {(0,2),(0,1),(1,2),(1,3)}
    _test1()

    def _test2():  # k > #neighbors
495
496
497
498
499
500
501
502
        subg = dgl.sampling.select_topk(g, -1, 'weight', [0, 2], edge_dir='out')
        assert subg.number_of_nodes() == g.number_of_nodes()
        u, v = subg.edges()
        u_ans, v_ans = subg.out_edges([0, 2])
        uv = set(zip(F.asnumpy(u), F.asnumpy(v)))
        uv_ans = set(zip(F.asnumpy(u_ans), F.asnumpy(v_ans)))
        assert uv == uv_ans

503
        subg = dgl.sampling.select_topk(g, 2, 'weight', [0, 2], edge_dir='out')
504
505
506
507
508
509
510
511
512
        assert subg.number_of_nodes() == g.number_of_nodes()
        assert subg.number_of_edges() == 3
        u, v = subg.edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(g.edge_ids(u, v), subg.edata[dgl.EID])
        assert edge_set == {(0,2),(0,1),(2,0)}
    _test2()

    def _test3():
513
        subg = dgl.sampling.select_topk(hg, 2, 'weight', {'user' : [0,1], 'game' : 0}, edge_dir='out')
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
        assert len(subg.ntypes) == 3
        assert len(subg.etypes) == 4
        u, v = subg['follow'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['follow'].edge_ids(u, v), subg['follow'].edata[dgl.EID])
        assert edge_set == {(0,2),(0,1),(1,2),(1,3)}
        u, v = subg['play'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['play'].edge_ids(u, v), subg['play'].edata[dgl.EID])
        assert edge_set == {(0,0)}
        u, v = subg['liked-by'].edges()
        edge_set = set(zip(list(F.asnumpy(u)), list(F.asnumpy(v))))
        assert F.array_equal(hg['liked-by'].edge_ids(u, v), subg['liked-by'].edata[dgl.EID])
        assert edge_set == {(0,2),(1,2),(0,1)}
        assert subg['flips'].number_of_edges() == 0
    _test3()

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU sample neighbors not implemented")
def test_sample_neighbors():
    _test_sample_neighbors(False)
534
    #_test_sample_neighbors(True)
535
536
537
538

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU sample neighbors not implemented")
def test_sample_neighbors_outedge():
    _test_sample_neighbors_outedge(False)
539
    #_test_sample_neighbors_outedge(True)
540
541
542
543

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU sample neighbors not implemented")
def test_sample_neighbors_topk():
    _test_sample_neighbors_topk(False)
544
    #_test_sample_neighbors_topk(True)
545
546
547
548

@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU sample neighbors not implemented")
def test_sample_neighbors_topk_outedge():
    _test_sample_neighbors_topk_outedge(False)
549
    #_test_sample_neighbors_topk_outedge(True)
550

551
552
@unittest.skipIf(F._default_context_str == 'gpu', reason="GPU sample neighbors not implemented")
def test_sample_neighbors_with_0deg():
553
    g = dgl.graph(([], []), num_nodes=5)
Quan (Andy) Gan's avatar
Quan (Andy) Gan committed
554
555
556
557
558
559
560
561
    sg = dgl.sampling.sample_neighbors(g, F.tensor([1, 2], dtype=F.int64), 2, edge_dir='in', replace=False)
    assert sg.number_of_edges() == 0
    sg = dgl.sampling.sample_neighbors(g, F.tensor([1, 2], dtype=F.int64), 2, edge_dir='in', replace=True)
    assert sg.number_of_edges() == 0
    sg = dgl.sampling.sample_neighbors(g, F.tensor([1, 2], dtype=F.int64), 2, edge_dir='out', replace=False)
    assert sg.number_of_edges() == 0
    sg = dgl.sampling.sample_neighbors(g, F.tensor([1, 2], dtype=F.int64), 2, edge_dir='out', replace=True)
    assert sg.number_of_edges() == 0
562

563
564
565
if __name__ == '__main__':
    test_random_walk()
    test_pack_traces()
566
    test_pinsage_sampling()
567
568
569
570
    test_sample_neighbors()
    test_sample_neighbors_outedge()
    test_sample_neighbors_topk()
    test_sample_neighbors_topk_outedge()
571
    test_sample_neighbors_with_0deg()