Commits · eda1ef2be2621970ba3c9674f8a2f1bf2251742b · tsoc / openmm

"csrc/vscode:/vscode.git/clone" did not exist on "3722ec71ca3c472bba0c89d85fcbea6f745cfb02"

02 Apr, 2016 1 commit
- Support negative residue numbers in PSF files. · eda1ef2b
  Jason Swails authored Apr 02, 2016
```
See https://simtk.org/forums/viewtopic.php?f=161&t=6512&p=16820#p16820 for more
information
```
  eda1ef2b
30 Mar, 2016 2 commits
- Merge pull request #1444 from peastman/tabulated · f4339363
  peastman authored Mar 30, 2016
```
Fixed an error in the earlier fix for tabulated functions with interaction groups
```
  f4339363
- Fixed an error in the earlier fix for tabulated functions with interaction groups · 2653817d
  Peter Eastman authored Mar 30, 2016
  
  2653817d
28 Mar, 2016 2 commits
- Merge pull request #1442 from peastman/tables · 375a7081
  peastman authored Mar 28, 2016
```
Fixed bug using tabulated functions with interaction groups
```
  375a7081
- Fixed bug using tabulated functions with interaction groups · 52ed82ec
  Peter Eastman authored Mar 28, 2016
  
  52ed82ec
25 Mar, 2016 2 commits
- Merge pull request #1438 from peastman/manuals · f2e879e0
  peastman authored Mar 25, 2016
```
Minor updates to manuals
```
  f2e879e0
- Minor updates to manuals · a45599d2
  peastman authored Mar 25, 2016
  
  a45599d2
24 Mar, 2016 2 commits
- Merge pull request #1432 from peastman/swig · 5c2681d4
  peastman authored Mar 24, 2016
```
Require SWIG 3.0.5 or later
```
  5c2681d4
- Require SWIG 3.0.5 or later · 06818d80
  peastman authored Mar 23, 2016
  
  06818d80
21 Mar, 2016 2 commits
- Merge pull request #1429 from peastman/utf8 · 293d7c6b
  peastman authored Mar 21, 2016
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Removed the UTF-8 header from a file
```
  293d7c6b
- Removed the UTF-8 header from a file · fb96746a
  peastman authored Mar 21, 2016
  
  fb96746a
18 Mar, 2016 3 commits
- Merge pull request #1425 from peastman/hetatm · e8ab1faa
  peastman authored Mar 18, 2016
```
PDBFile writes HETATM for heterogens
```
  e8ab1faa
- PDBFile writes HETATM for heterogens · f6973b92
  peastman authored Mar 18, 2016
  
  f6973b92
- Merge pull request #1424 from peastman/blockenums · 0d7cf997
  peastman authored Mar 18, 2016
```
Renamed enums that caused Fortran compiler errors
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  0d7cf997
17 Mar, 2016 1 commit
- Renamed enums that caused Fortran compiler errors · 1647f1e9
  peastman authored Mar 17, 2016
  
  1647f1e9
14 Mar, 2016 3 commits
- Merge pull request #1420 from peastman/wrappergroups · 38f8d5f4
  peastman authored Mar 14, 2016
```
C and Fortran wrappers support groups argument to getState()
```
  38f8d5f4
- C and Fortran wrappers support groups argument to getState() · d2bf2685
  Peter Eastman authored Mar 14, 2016
  
  d2bf2685
- Merge pull request #1416 from peastman/docs · 96fbf8bb
  peastman authored Mar 14, 2016
```
Can build manuals on Windows
```
  96fbf8bb
11 Mar, 2016 1 commit
- Can build manuals on Windows · e179cadd
  peastman authored Mar 11, 2016
  
  e179cadd
04 Mar, 2016 2 commits
- Merge pull request #1407 from peastman/coefficients · 9b5b52f2
  peastman authored Mar 04, 2016
```
Updated default coefficients for extrapolated polarization
```
  9b5b52f2
- Updated default coefficients for extrapolated polarization · 71cb7358
  Peter Eastman authored Mar 04, 2016
  
  71cb7358
01 Mar, 2016 1 commit
- Merge pull request #1405 from pgrinaway/fix-3-member-rings · b768ff4a
  peastman authored Feb 29, 2016
```
Fix 3 member rings
```
  b768ff4a
29 Feb, 2016 3 commits
- make clearer · 6aea38c9
  pgrinaway authored Feb 29, 2016
  
  6aea38c9
- fix or -> and · 405607e0
  pgrinaway authored Feb 29, 2016
  
  405607e0
- check to make sure duplicate atoms are not assigned in torsions · 42b5a69c
  pgrinaway authored Feb 29, 2016
  
  42b5a69c
26 Feb, 2016 4 commits
- Merge pull request #1403 from peastman/neighbors · e1c49ebd
  peastman authored Feb 26, 2016
```
Fixed a bug in CPU neighbor list with triclinic boxes
```
  e1c49ebd
- Fixed a bug in CPU neighbor list with triclinic boxes · a4f7077b
  peastman authored Feb 26, 2016
  
  a4f7077b
- Merge pull request #1402 from peastman/ewaldenergy · 7633a01c
  peastman authored Feb 26, 2016
```
Part of the Ewald energy was being returned even when that force group wasn't requested
```
  7633a01c
- Part of the Ewald energy was being returned even when that force group wasn't requested · 34b7e213
  Peter Eastman authored Feb 26, 2016
  
  34b7e213
17 Feb, 2016 2 commits
- Merge pull request #1396 from jchodera/fix-packaging-scripts · 20af24c4
  peastman authored Feb 17, 2016
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Update packaging preparation scripts
```
  20af24c4
- Update packaging preparation scripts · 3bc2008a
  jchodera authored Feb 17, 2016
  
  3bc2008a
15 Feb, 2016 1 commit
- Merge pull request #1369 from peastman/scripts · 2060b5b5
  peastman authored Feb 15, 2016
```
Updates to packaging scripts for 7.0
```
  2060b5b5
12 Feb, 2016 1 commit
- Fixed miniconda URL · 43214550
  Peter Eastman authored Feb 12, 2016
  
  43214550
10 Feb, 2016 2 commits
- Merge pull request #1360 from peastman/debugcl · 4c6503e0
  peastman authored Feb 10, 2016
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Debugging OpenCL errors on travis
```
  4c6503e0
- Fixed errors in CustomManyParticleForce · a7ce5784
  peastman authored Jan 22, 2016
  
  a7ce5784
08 Feb, 2016 5 commits
- Another attempt at getting the docs to build correctly · 22697eb2
  peastman authored Feb 08, 2016
  
  22697eb2
- Merge pull request #1391 from peastman/xml · 9b892909
  peastman authored Feb 08, 2016
```
irrXML supports numeric escapes
```
  9b892909
- Merge branch 'scripts' of https://github.com/peastman/openmm into scripts · dbaeb984
  Peter Eastman authored Feb 08, 2016
  
  dbaeb984
- Make PythonInstall before trying to build Python API docs · 46fb5c51
  peastman authored Feb 08, 2016
  
  46fb5c51
- irrXML supports numeric escapes · 2f8448a5
  Peter Eastman authored Feb 08, 2016
  
  2f8448a5