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  1. 14 Apr, 2020 1 commit
  3. 03 Apr, 2020 1 commit
  5. 23 Mar, 2020 1 commit
    • Alex Henrie's avatar
      Remove unused variables (#2605) · a752d258
      Alex Henrie authored 
      * Remove unused variable from CpuCustomGBForce::calculateIxn

* Remove unused variable from CpuCalcCustomManyParticleForceKernel::initialize

* Remove unused variable from CudaCalcCustomCVForceKernel::initialize

* Remove unused variable from ReferenceCalcCustomManyParticleForceKernel::initialize

* Remove unused variables from ReferenceObc::computeBornEnergyForces

* Remove unused variable from AmoebaTorsionTorsionForceProxy::serialize
      a752d258
  7. 06 Mar, 2020 1 commit
  9. 28 Feb, 2020 4 commits
  11. 27 Feb, 2020 1 commit
  13. 26 Feb, 2020 1 commit
  15. 21 Feb, 2020 1 commit
  17. 14 Feb, 2020 1 commit
  19. 07 Feb, 2020 1 commit
  21. 04 Feb, 2020 3 commits
  23. 30 Jan, 2020 1 commit
  25. 28 Jan, 2020 2 commits
  27. 16 Jan, 2020 1 commit
  29. 14 Jan, 2020 1 commit
  31. 08 Jan, 2020 1 commit
    • peastman's avatar
      Common compute framework to unify CUDA and OpenCL code (#2488) · edbc8407
      peastman authored 
      * Began creating common compute framework to unify code between CUDA and OpenCL

* Began OpenCL implementation of common compute framework

* Common implementation of CMMotionRemover

* CUDA implementation of common compute interface

* Converted HarmonicBondForce to common compute API

* Converted standard bonded forces to common compute API

* Converted ExpressionUtilities to common compute API

* Created ComputeParameterSet

* Converted custom bonded forces to common compute API

* Converted CustomCentroidBondForce to common compute API

* Converted CustomManyParticleForce to common compute API

* Moved lots of duplicate code from CudaContext and OpenCLContext to ComputeContext

* Converted GayBerneForce to common compute API

* Removed obsolete kernels

* Converted verlet integrators to common compute API

* Converted Langevin and Brownian integrators to common compute API

* Converted CustomIntegrator to common compute API

* Converted CustomNonbondedForce to common compute API

* Removed uses of a deprecated API

* Fixed failing test cases

* Converted GBSAOBCForce to common compute API

* Began converting CustomGBForce to common compute API

* Finished converting CustomGBForce to common compute API

* Merged duplicated code in CudaIntegrationUtilities and OpenCLIntegrationUtilities

* Converted RMSDForce and AndersenThermostat to common compute API

* Converted CustomHbondForce to common compute API

* Merged scripts for encoding kernel sources

* Converted Drude plugin to common compute API

* Fixed errors in CMake scripts

* Attempt at fixing errors on Windows

* Added discussion of common compute API to developer guide

* Added Windows export macro for common classes

* Fixed error in CMMotionRemover

* Ubdated travis to newer Ubuntu version

* Fixed errors on CPU OpenCL

* Fixed Windows linking errors

* Added missing pragma for 32 bit atomics

* Replaced long long with mm_long

* More fixes to Windows linking

* Bug fix
      edbc8407
  33. 11 Dec, 2019 2 commits
  35. 04 Dec, 2019 1 commit
  37. 19 Nov, 2019 1 commit
  39. 15 Nov, 2019 1 commit
  41. 12 Nov, 2019 1 commit
  43. 07 Nov, 2019 1 commit
  45. 04 Nov, 2019 1 commit
  47. 01 Nov, 2019 1 commit
  49. 25 Oct, 2019 3 commits
  51. 24 Oct, 2019 6 commits