__init__.py 1.3 KB
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"""
OpenMM Application
"""
__docformat__ = "epytext en"

__author__ = "Peter Eastman"
__copyright__ = "Copyright 2011, Stanford University and Peter Eastman"
__credits__ = []
__license__ = "MIT"
__maintainer__ = "Peter Eastman"
__email__ = "peastman@stanford.edu"

from topology import Topology, Chain, Residue, Atom
from pdbfile import PDBFile
from forcefield import ForceField
from simulation import Simulation
from pdbreporter import PDBReporter
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from amberprmtopfile import AmberPrmtopFile, HCT, OBC1, OBC2, GBn, GBn2
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from amberinpcrdfile import AmberInpcrdFile
from dcdfile import DCDFile
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from gromacsgrofile import GromacsGroFile
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from gromacstopfile import GromacsTopFile
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from dcdreporter import DCDReporter
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from modeller import Modeller
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from statedatareporter import StateDataReporter
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from element import Element
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from desmonddmsfile import DesmondDMSFile
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from checkpointreporter import CheckpointReporter
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from charmmcrdfiles import CharmmCrdFile, CharmmRstFile
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from charmmparameterset import CharmmParameterSet
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from charmmpsffile import CharmmPsfFile
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# Enumerated values

NoCutoff = forcefield.NoCutoff
CutoffNonPeriodic = forcefield.CutoffNonPeriodic
CutoffPeriodic = forcefield.CutoffPeriodic
Ewald = forcefield.Ewald
PME = forcefield.PME

HBonds = forcefield.HBonds
AllBonds = forcefield.AllBonds
HAngles = forcefield.HAngles