GitLab

* dev

* dev

* dev

* dev

* dev

---------
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* dev

* dev

* dev

* Update static_analysis.yml

* Update .pre-commit-config.yaml

---------
Co-authored-by: James Lamb <jaylamb20@gmail.com>

Instead of replacing all #ifdef USE_CUDA, just add USE_CUDA define to ROCm build.

Previously #6086 added ROCm support but after numerous rebases it lost
critical changes. This PR restores the ROCm build.

There are many source file changes but most were automated using the
following:

```bash
for f in `grep -rl '#ifdef USE_CUDA'`
do
    sed -i 's@#ifdef USE_CUDA@#if defined(USE_CUDA) || defined(USE_ROCM)@g' $f
done

for f in `grep -rl '#endif  // USE_CUDA'`
do
    sed -i 's@#endif  // USE_CUDA@#endif  // USE_CUDA || USE_ROCM@g' $f
done
```

* [ci] [c++] use 'pre-commit' to run 'cpplint', upgrade to 'cpplint' 2.0.2

* remove bashisms

* one more pipefail use

* another pipefail

* Add serialization of reference dataset

* lint and missing file

* Fixes from reviewers

* responded to comments

* revert sdk change

* [ci] speed up if-else, swig, and lint conda setup

* add 'source activate'

* python constraint

* start removing cuda v1

* comment out CI

* remove more references

* revert some unnecessaary changes

* revert a few more mistakes

* revert another change that ignored params

* sigh

* remove CUDATreeLearner

* fix tests, docs

* fix quoting in setup.py

* restore all CI

* Apply suggestions from code review
Co-authored-by: shiyu1994 <shiyu_k1994@qq.com>

* Apply suggestions from code review

* completely remove cuda_exp, update docs

---------
Co-authored-by: shiyu1994 <shiyu_k1994@qq.com>

remove redundant whitespaces

* add default definition for GetColWiseData and GetColWiseData

* fix warnings of template instantiation

* remove files in Makevars and LightGBM.vcxproj

Co-authored-by: Nikita Titov <nekit94-12@hotmail.com>

* store without offset in multi_val_dense_bin

* fix offset bug

* add comment for offset

* add comment for bin type selection

* faster operations for offset

* keep most freq bin in histogram for multi val dense

* use original feature iterators

* consider 9 cases (3 x 3) for multi val bin construction

* fix dense bin setting

* fix bin data in multi val group

* fix offset of the first feature histogram

* use float hist buf

* avx in histogram construction

* use avx for hist construction without prefetch

* vectorize bin extraction

* use only 128 vec

* use avx2

* use vectorization for sparse row wise

* add bit size for multi val dense bin

* float with no vectorization

* change multithreading strategy to dynamic

* remove intrinsic header

* fix dense multi val col copy

* remove bit size

* use large enough block size when the bin number is large

* calc min block size by sparsity

* rescale gradients

* rollback gradients scaling

* single precision histogram buffer as an option

* add float hist buffer with thread buffer

* fix setting zero in hist data

* fix hist begin pointer in tree learners

* remove debug logs

* remove omp simd

* update Makevars of R-package

* fix feature group binary storing

* two row wise for double hist buffer

* add subfeature for two row wise

* remove useless code and fix two row wise

* refactor code

* grouping the dense feature groups can get sparse multi val bin

* clean format problems

* one thread for two blocks in sep row wise

* use ordered gradients for sep row wise

* fix grad ptr

* ordered grad with combined block for sep row wise

* fix block threading

* use the same min block size

* rollback share min block size

* remove logs

* Update src/io/dataset.cpp
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* fix parameter description

* remove sep_row_wise

* remove check codes

* add check for empty multi val bin

* fix lint error

* rollback changes in config.h

* Apply suggestions from code review
Co-authored-by: Ubuntu <shiyu@gbdt-04.ren3kv4wanvufliwrpy4k03lsf.xx.internal.cloudapp.net>
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* fix dataset binary file alignment

* many fixes

* fix warnings

* fix bug

* Update file_io.cpp

* Update file_io.cpp

* simplify code

* Apply suggestions from code review

* general

* remove unneeded alignment

* Update file_io.h

* int32 to byte8 alignment

* Apply suggestions from code review

* Apply suggestions from code review

* fix zero bin

* some fix

* fix bin mapping

* fix

* fix bug

* use stable sort

* fix cat forced split

* Apply suggestions from code review

* Apply suggestions from code review

* Apply suggestions from code review

This reverts commit 656d2676.

* commit

* fix msvc

* fix format

* fixed cpplint errors

* fixed more cpplint errors

* fix

* Update multi_val_sparse_bin.hpp

* avoid most_freq_bin to be 0 in categorical features

* Apply suggestions from code review

* add tests

* update test

* Apply suggestions from code review

* Apply suggestions from code review

* reset

* fix a bug

* fix test

* Update c_api.h

* support to no filter features by min_data

* add warning in reset config

* refine warnings for override dataset's parameter

* some cleans

* clean code

* clean code

* refine C API function doxygen comments

* refined new param description

* refined doxygen comments for R API function

* removed stuff related to int8

* break long line in warning message

* removed tests which results cannot be validated anymore

* added test for warnings about unchangeable params

* write parameter from dataset to booster

* consider free_raw_data.

* fix params

* fix bug

* implementing R

* fix typo

* filter params in R

* fix R

* not min_data

* refined tests

* fixed linting

* refine

* pilint

* add docstring

* fix docstring

* R lint

* updated description for C API function

* use param aliases in Python

* fixed typo

* fixed typo

* added more params to test

* removed debug print

* fix dataset construct place

* fix merge bug

* Update feature_histogram.hpp

* add is_sparse back

* remove unused parameters

* fix lint

* add data random seed

* update

* [R-package] centrallized Dataset parameter aliases and added tests on Dataset parameter updating (#2767)
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* commit

* refactoring

* Update src/io/bin.cpp

* Apply suggestions from code review

* bug

* code clean

* remove warning

* commit

* update parameter

* various minor style, docs and cpplint improvements

* fixed typo in warning

* fix recently added cpplint errors

* move note for params upper in description for consistency

* commit

* fix a bug

* fix bug

* reset to track changes

* refine the auto choose logic

* sort the time stats output

* fix include

* change  multi_val_bin_sparse_threshold

* add cmake

* add _mm_malloc and _mm_free for cross platform

* fix cmake bug

* timer for split

* try to fix cmake

* fix tests

* refactor DataPartition::Split

* fix test

* typo

* formating

* Revert "formating"

This reverts commit 5b8de4f7fb9d975ee23701d276a66d40ee6d4222.

* add document

* [R-package] Added tests on use of force_col_wise and force_row_wise in training (#2719)

* naming

* fix gpu code

* Update include/LightGBM/bin.h
Co-Authored-By: James Lamb <jaylamb20@gmail.com>

* Update src/treelearner/ocl/histogram16.cl

* test: swap compilers for CI

* fix omp

* not avx2

* no aligned for feature histogram

* Revert "refactor DataPartition::Split"

This reverts commit 256e6d9641ade966a1f54da1752e998a1149b6f8.

* slightly refactor data partition

* reduce the memory cost
Co-authored-by: James Lamb <jaylamb20@gmail.com>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* implement

* fix warning

* fix bug

* fix a bug

* remove unneed function

* fix data push bug

* fix valid data push

* fix bug for missing_type=zero

* refine split

* renames

* typo

* reduce the buffer when using high dimensional data in distributed mode.

* Update dataset_loader.cpp

* refix

* typo

* fix number of bin accumulation.

* avoid overflow

* fix warning

* efficient solution.

* Update dataset.h

* fix bin count output

* fix warning

* bug in dist number of feature check

* fix possible edge case

* Update dataset.cpp

* possible bug fix

* fix

* Fix bug where small values of max_bin cause crash.

* Revert "Fix bug where small values of max_bin cause crash."

This reverts commit fe5c8e2547057c1fa5750bcddd359dd7708fab4b.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Change binning behavior to be same as PR #2342.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Change binning behavior to be same as PR #2342.

* Add functionality to force bin thresholds.

* Fix style issues.

* Minor style and doc fixes.

* Add functionality to force bin thresholds.

* Fix style issues.

* Minor style and doc fixes.

* Change binning behavior to be same as PR #2342.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Add functionality to force bin thresholds.

* Fix style issues.

* Use stable sort.

* Minor style and doc fixes.

* Change binning behavior to be same as PR #2342.

* Use different bin finding function for predefined bounds.

* Fix style issues.

* Minor refactoring, overload FindBinWithZeroAsOneBin.

* Fix style issues.

* Fix bug and add new test.

* Add warning when using categorical features with forced bins.

* Pass forced_upper_bounds by reference.

* Pass container types by const reference.

* Get categorical features using FeatureBinMapper.

* Fix bug for small max_bin.

* Move GetForcedBins to DatasetLoader.

* Find forced bins in dataset_loader.

* Minor fixes.

* fix many cpp lint errors

* indent

* fix bug

* fix more

* fix gpu

* more fixes

* fix the bug in bin with small values

* Update bin.cpp

* Update test_engine.py

* Fix bug where small values of max_bin cause crash.

* Revert "Fix bug where small values of max_bin cause crash."

This reverts commit fe5c8e2547057c1fa5750bcddd359dd7708fab4b.

* Fix bug where small values of max_bin cause crash.

* Reset random seed in test, remove extra blank line.

* Minor bug fix. Remove extra blank line.

* Change old test to account for new binning behavior.

* added all necessary includes - fixed build/include_what_you_use error

* fixed the order of includes (build/include_order)