Commits · 336c899acb0ab3074716a4042a58051f2db0466f · OpenDAS / OpenFold

08 Dec, 2023 1 commit
- Minor test and README changes · 336c899a
  Christina Floristean authored Dec 08, 2023
  
  336c899a
29 Nov, 2023 1 commit
- Adds Soloseq parameter download script. · 4a50c9c4
  jnwei authored Nov 29, 2023
  
  4a50c9c4
25 Oct, 2023 2 commits
- README: Small improvements, info regarding templates · 9e32781f
  Sachin Kadyan authored Oct 25, 2023
  
  9e32781f
- Update readme, also reset flash attention version to 0.2.1 in environment.yml · f68a6c69
  jnwei authored Oct 25, 2023
  
  f68a6c69
24 Oct, 2023 2 commits
- README: Update details about SoloSeq and inference-time embedding generation. · 2d4fe4f4
  Sachin Kadyan authored Oct 24, 2023
  
  2d4fe4f4
- README: Add details about using the bulk embedding generation script · 4c8e3764
  Sachin Kadyan authored Oct 23, 2023
  
  4c8e3764
20 Oct, 2023 3 commits
- Update BibTex · 0c20e3c9
  Gustaf Ahdritz authored Oct 19, 2023
  
  0c20e3c9
- Remove conda env config setting and update to README · d6ae9f58
  jnwei authored Oct 20, 2023
  
  d6ae9f58
- Updates installation instructions in the README. · 3e3f07c7
  Jennifer Wei authored Oct 20, 2023
  
  3e3f07c7
19 Oct, 2023 1 commit
- Update BibTex · 2300f672
  Gustaf Ahdritz authored Oct 19, 2023
  
  2300f672
11 Oct, 2023 1 commit
- README fixes for single sequence model · 6381ddd6
  Sachin Kadyan authored Oct 11, 2023
  
  6381ddd6
10 Oct, 2023 2 commits
- Fix typos · 6aefa986
  Gustaf Ahdritz authored Sep 29, 2023
  
  6aefa986
- Updated README: Running seqemb model inference · 3c240cb3
  Sachin Kadyan authored Sep 27, 2023
  
  3c240cb3
14 Sep, 2023 1 commit
- Update kernel description in README · a4fbd978
  Christina Floristean authored Sep 14, 2023
  
  a4fbd978
13 Sep, 2023 1 commit
- Add kernel as new feature in README · 0a6230a3
  Christina Floristean authored Sep 13, 2023
  
  0a6230a3
14 Aug, 2023 1 commit
- Update BibTeX · 2134cc09
  Gustaf Ahdritz authored Aug 14, 2023
  
  2134cc09
15 Apr, 2023 1 commit
- Remove misleading link · c8b98f54
  Gustaf Ahdritz authored Apr 15, 2023
  
  c8b98f54
26 Feb, 2023 1 commit
- cpus_per_task · 12f2cd4e
  awaelchli authored Feb 26, 2023
  
  12f2cd4e
13 Dec, 2022 1 commit
- add long_sequence_inference option to command line · ef222a31
  Sam DeLuca authored Dec 13, 2022
  
  ef222a31
06 Dec, 2022 1 commit
- Update link · 59277de1
  Gustaf Ahdritz authored Dec 05, 2022
  
  59277de1
24 Nov, 2022 1 commit
- Shorten bibTeX · 109442b1
  Gustaf Ahdritz authored Nov 23, 2022
  
  109442b1
22 Nov, 2022 1 commit
- Update BibTex · 962ab7a4
  Gustaf Ahdritz authored Nov 22, 2022
  
  962ab7a4
28 Sep, 2022 1 commit
- Add half-precision training to README · a1f77ad0
  Gustaf Ahdritz authored Sep 27, 2022
  
  a1f77ad0
28 Aug, 2022 2 commits
- Reformat README a little · d54b4afa
  Gustaf Ahdritz authored Aug 28, 2022
  
  d54b4afa
- Improve RODA download process · 2c7627f3
  Gustaf Ahdritz authored Aug 28, 2022
  
  2c7627f3
12 Aug, 2022 1 commit
- Unzip uniref30_2103.tar.gz after download · 19bce219
  Tim O'Donnell authored Aug 12, 2022
```
Also fix a typo in the README
```
  19bce219
10 Aug, 2022 1 commit
- Add RODA flattening script · 8881b210
  Gustaf Ahdritz authored Aug 09, 2022
  
  8881b210
08 Aug, 2022 1 commit
- Replace cursed seed · e8b3789f
  Gustaf Ahdritz authored Aug 08, 2022
  
  e8b3789f
05 Aug, 2022 1 commit
- Add long sequence inference preset · e49c6dc7
  Gustaf Ahdritz authored Aug 05, 2022
  
  e49c6dc7
02 Aug, 2022 3 commits
- Add CAMEO link · b18026fd
  Gustaf Ahdritz authored Aug 01, 2022
  
  b18026fd
- Improve validation set instructions · 5fecb921
  Gustaf Ahdritz authored Aug 01, 2022
  
  5fecb921
- Improve validation download script · 3ced7cf2
  Gustaf Ahdritz authored Aug 01, 2022
  
  3ced7cf2
30 Jul, 2022 1 commit
- Fix sample training command · d96f27b1
  Gustaf Ahdritz authored Jul 29, 2022
  
  d96f27b1
29 Jul, 2022 1 commit
- Fix sample training command · ce2e1f29
  Gustaf Ahdritz authored Jul 29, 2022
  
  ce2e1f29
21 Jul, 2022 1 commit
- Add note about parameter/preset compatibility · b8034138
  Gustaf Ahdritz authored Jul 21, 2022
  
  b8034138
20 Jul, 2022 1 commit
- Reword README · 4deed417
  Gustaf Ahdritz authored Jul 20, 2022
  
  4deed417
19 Jul, 2022 1 commit
- Add aws requirement to README · 5739b631
  Gustaf Ahdritz authored Jul 19, 2022
  
  5739b631
15 Jul, 2022 2 commits
- Add note about FlashAttention · 04fd6d34
  Gustaf Ahdritz authored Jul 15, 2022
  
  04fd6d34
- Update README · 4a6c9bf1
  Gustaf Ahdritz authored Jul 15, 2022
  
  4a6c9bf1
14 Jul, 2022 1 commit
- Revise FlashAttention section of README · bfa6c7d0
  Gustaf Ahdritz authored Jul 14, 2022
  
  bfa6c7d0