Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in / Register
Toggle navigation
Menu
Open sidebar
OpenDAS
OpenFold
Commits
a46f1b12
"git@developer.sourcefind.cn:OpenDAS/openpcdet.git" did not exist on "093efb9a81af77aac0f396b157f11cd5a197fa74"
Commit
a46f1b12
authored
Feb 04, 2022
by
Gustaf Ahdritz
Browse files
Revert changes to mmcif cache gen script
parent
7f9f5326
Changes
2
Hide whitespace changes
Inline
Side-by-side
Showing
2 changed files
with
3 additions
and
2 deletions
+3
-2
README.md
README.md
+1
-1
scripts/generate_mmcif_cache.py
scripts/generate_mmcif_cache.py
+2
-1
No files found.
README.md
View file @
a46f1b12
...
...
@@ -181,7 +181,7 @@ files, we provide `scripts/data_dir_to_fasta.py`.
Next, generate a cache of certain datapoints in the mmCIF files:
```
bash
python3 scripts/generate_
prot_data
_cache.py
\
python3 scripts/generate_
mmcif
_cache.py
\
mmcif_dir/
\
mmcif_cache.json
\
--no_workers
16
...
...
scripts/generate_
prot_data
_cache.py
→
scripts/generate_
mmcif
_cache.py
View file @
a46f1b12
import
argparse
from
functools
import
partial
import
json
import
logging
from
multiprocessing
import
Pool
import
os
import
sys
import
json
sys
.
path
.
append
(
"."
)
# an innocent hack to get this to run from the top level
from
tqdm
import
tqdm
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment