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"tools/cfgs/git@developer.sourcefind.cn:OpenDAS/openpcdet.git" did not exist on "c1d93158891a044e00c7ff0d41873d89eea20fa9"
Commit 57cb093e authored by Gustaf Ahdritz's avatar Gustaf Ahdritz
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Update notebook

parent ceb1f087
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notebooks/OpenFold.ipynb
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......@@ -143,7 +143,7 @@
" with tqdm.notebook.tqdm(total=100, bar_format=TQDM_BAR_FORMAT) as pbar:\n",
" with io.capture_output() as captured:\n",
" %shell rm -rf openfold\n",
" %shell git clone {GIT_REPO} openfold && cd openfold && git checkout 71189e && cd ..\n",
" %shell git clone {GIT_REPO} openfold\n",
" pbar.update(8)\n",
" # Install the required versions of all dependencies.\n",
" %shell pip3 install -r ./openfold/requirements.txt\n",
......@@ -251,10 +251,10 @@
"import torch\n",
"\n",
"from openfold import config\n",
"from openfold.features import feature_pipeline\n",
"from openfold.features import parsers\n",
"from openfold.features.np import data_pipeline\n",
"from openfold.features.np import jackhmmer\n",
"from openfold.data import feature_pipeline\n",
"from openfold.data import parsers\n",
"from openfold.data import data_pipeline\n",
"from openfold.data.tools import jackhmmer\n",
"from openfold.model import model\n",
"from openfold.np import protein\n",
"from openfold.np.relax import relax\n",
......
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