1. 04 Nov, 2019 2 commits
  2. 03 Nov, 2019 1 commit
    • Zihao Ye's avatar
      [NN] nn modules & examples update (#890) · 9a0511c8
      Zihao Ye authored
      * upd
      
      * damn it
      
      * fuck
      
      * fuck pylint
      
      * fudge
      
      * remove some comments about MXNet
      
      * upd
      
      * upd
      
      * damn it
      
      * damn it
      
      * fuck
      
      * fuck
      
      * upd
      
      * upd
      
      * pylint bastard
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      9a0511c8
  3. 30 Oct, 2019 1 commit
    • xiang song(charlie.song)'s avatar
      [Bug Fix] Fix package reliability bug of networkx (#949) · 82499e60
      xiang song(charlie.song) authored
      * upd
      
      * fig edgebatch edges
      
      * add test
      
      * trigger
      
      * Update README.md for pytorch PinSage example.
      
      Add noting that the PinSage model example under
      example/pytorch/recommendation only work with Python 3.6+
      as its dataset loader depends on stanfordnlp package
      which work only with Python 3.6+.
      
      * Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
      
      1. make dgl.nn.xxx frame agnostic
      2. make test.backend include dgl.nn modules
      3. modify test_edge_softmax of test/mxnet/test_nn.py and
          test/pytorch/test_nn.py work on both CPU and GPU
      
      * Fix style
      
      * Delete unused code
      
      * Make agnostic test only related to tests/backend
      
      1. clear all agnostic related code in dgl.nn
      2. make test_graph_conv agnostic to cpu/gpu
      
      * Fix code style
      
      * fix
      
      * doc
      
      * Make all test code under tests.mxnet/pytorch.test_nn.py
      work on both CPU and GPU.
      
      * Fix syntex
      
      * Remove rand
      
      * Add TAGCN nn.module and example
      
      * Now tagcn can run on CPU.
      
      * Add unitest for TGConv
      
      * Fix style
      
      * For pubmed dataset, using --lr=0.005 can achieve better acc
      
      * Fix style
      
      * Fix some descriptions
      
      * trigger
      
      * Fix doc
      
      * Add nn.TGConv and example
      
      * Fix bug
      
      * Update data in mxnet.tagcn test acc.
      
      * Fix some comments and code
      
      * delete useless code
      
      * Fix namming
      
      * Fix bug
      
      * Fix bug
      
      * Add test for mxnet TAGCov
      
      * Add test code for mxnet TAGCov
      
      * Update some docs
      
      * Fix some code
      
      * Update docs dgl.nn.mxnet
      
      * Update weight init
      
      * Fix
      
      * reproduce the bug
      
      * Fix concurrency bug reported at #755.
      Also make test_shared_mem_store.py more deterministic.
      
      * Update test_shared_mem_store.py
      
      * Update dmlc/core
      
      * networkx >= 2.4 will break our examples
      
      * Update tutorials/requirements
      
      * fix selfloop edges
      
      * upd version
      82499e60
  4. 21 Oct, 2019 1 commit
  5. 26 Sep, 2019 1 commit
    • Minjie Wang's avatar
      [Model][Hetero] GCMC using new hetero APIs (#860) · 9737b270
      Minjie Wang authored
      * init
      
      * rm data
      
      * README
      
      * fix rating values that are not decimal
      
      * rm stale codes
      
      * small fix
      
      * upd
      
      * rewrite decoder
      
      * fix many
      
      * many fix; performance matched
      
      * upd; handle sparse input
      
      * upd
      
      * address comments
      
      * more docstring; download data automatically
      
      * shared param mode
      9737b270
  6. 11 Sep, 2019 1 commit
  7. 09 Sep, 2019 1 commit
  8. 28 Aug, 2019 1 commit
    • xiang song(charlie.song)'s avatar
      [NN] Add MXNet impl for TAGCN module. (#799) · e17add56
      xiang song(charlie.song) authored
      * upd
      
      * fig edgebatch edges
      
      * add test
      
      * trigger
      
      * Update README.md for pytorch PinSage example.
      
      Add noting that the PinSage model example under
      example/pytorch/recommendation only work with Python 3.6+
      as its dataset loader depends on stanfordnlp package
      which work only with Python 3.6+.
      
      * Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
      
      1. make dgl.nn.xxx frame agnostic
      2. make test.backend include dgl.nn modules
      3. modify test_edge_softmax of test/mxnet/test_nn.py and
          test/pytorch/test_nn.py work on both CPU and GPU
      
      * Fix style
      
      * Delete unused code
      
      * Make agnostic test only related to tests/backend
      
      1. clear all agnostic related code in dgl.nn
      2. make test_graph_conv agnostic to cpu/gpu
      
      * Fix code style
      
      * fix
      
      * doc
      
      * Make all test code under tests.mxnet/pytorch.test_nn.py
      work on both CPU and GPU.
      
      * Fix syntex
      
      * Remove rand
      
      * Add TAGCN nn.module and example
      
      * Now tagcn can run on CPU.
      
      * Add unitest for TGConv
      
      * Fix style
      
      * For pubmed dataset, using --lr=0.005 can achieve better acc
      
      * Fix style
      
      * Fix some descriptions
      
      * trigger
      
      * Fix doc
      
      * Add nn.TGConv and example
      
      * Fix bug
      
      * Update data in mxnet.tagcn test acc.
      
      * Fix some comments and code
      
      * delete useless code
      
      * Fix namming
      
      * Fix bug
      
      * Fix bug
      
      * Add test code for mxnet TAGCov
      
      * Update some docs
      
      * Fix some code
      
      * Update docs dgl.nn.mxnet
      
      * Update weight init
      
      * Fix
      e17add56
  9. 27 Aug, 2019 1 commit
  10. 23 Aug, 2019 1 commit
    • Minjie Wang's avatar
      [NN] RGCN modules (#744) · 708765f0
      Minjie Wang authored
      * rgcn module
      
      * support id input
      
      * WIP: model codes
      
      * use faster index select
      
      * dropout
      
      * self loop
      
      * WIP: link prediction
      
      * fix lint
      
      * WIP: docs
      
      * docstring
      
      * docstring
      
      * merge two child classes
      
      * mxnet rgcn module
      
      * fix lint
      
      * fix lint
      
      * fix rename bug
      
      * add uniform edge sampler
      
      * fix fn name
      
      * docstring
      
      * fix mxnet rgcn module
      
      * fix mx rgcn
      
      * enable test on cuda
      708765f0
  11. 21 Aug, 2019 1 commit
  12. 12 Jun, 2019 1 commit
  13. 10 Jun, 2019 1 commit
    • Da Zheng's avatar
      [BUGFIX] extand DGLGraph graph_data. (#632) · 411bcd7e
      Da Zheng authored
      * enable tutorial test in CI.
      
      * extand DGLGraph graph_data.
      
      * update doc.
      
      * Revert "enable tutorial test in CI."
      
      This reverts commit cd774067180922bb6ae979bde4aecbffc61c8147.
      
      * accept DGLGraph in graph store.
      411bcd7e
  14. 09 Jun, 2019 3 commits
    • Da Zheng's avatar
      Define node/edge Ids in NodeFlow more clearly (#628) · fc7775a2
      Da Zheng authored
      * add tests.
      
      * distinguish layer-local nid and nodeflow nid.
      
      * use numpy assert_array_equal and assert_allclose
      
      * fix map_from_parent_nid
      
      * fix test
      
      * fix test.
      
      * renmae remap.
      
      * update doc.
      
      * update doc.
      
      * update doc.
      
      * fix test.
      
      * fix test.
      fc7775a2
    • Minjie Wang's avatar
      [Examples] Run all the examples (#623) · dec8b49b
      Minjie Wang authored
      * all pytorch examples
      
      * scan through mxnet examples
      
      * change reddit data
      
      * tweak numerical range for unittest
      
      * fix ci
      
      * fix ci
      
      * fix
      
      * add seed to workaround
      dec8b49b
    • Lingfan Yu's avatar
      [Model] Update GAT model code (#622) · 74e13eea
      Lingfan Yu authored
      * fix gat code to use latest edge softmax module
      
      * avoid transpose
      
      * update README
      
      * use edge_softmax op
      
      * mxnet edge softmax op
      
      * mxnet gat
      
      * update README
      
      * fix unittest
      
      * fix ci
      
      * fix mxnet nn test; relax criteria for prod reducer
      74e13eea
  15. 02 Jun, 2019 1 commit
    • Minjie Wang's avatar
      [Graph] Add API to convert graph to simple graph (#587) · 01a4cc5b
      Minjie Wang authored
      * to simple
      
      * WIP: multigraph flag
      
      * graph index refactor; pass basic testing
      
      * graph index refactor; pass basic testing
      
      * fix bug in to_simple; pass torch test
      
      * fix mx utest
      
      * fix example
      
      * fix lint
      
      * fix ci
      
      * poke ci
      
      * poke ci
      
      * WIP
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * change ci workspace
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * poke ci
      
      * delete ci
      
      * use enum for multigraph flag
      01a4cc5b
  16. 30 May, 2019 2 commits
  17. 28 May, 2019 1 commit
  18. 26 May, 2019 1 commit
  19. 25 May, 2019 1 commit
  20. 23 May, 2019 4 commits
  21. 21 May, 2019 1 commit
    • Da Zheng's avatar
      [API] update graph store API. (#549) · b2b8be25
      Da Zheng authored
      * add init_ndata and init_edata in DGLGraph.
      
      * adjust SharedMemoryGraph API.
      
      * print warning.
      
      * fix comment.
      
      * update example
      
      * fix.
      
      * fix examples.
      
      * add unit tests.
      
      * add comments.
      b2b8be25
  22. 20 May, 2019 1 commit
    • Da Zheng's avatar
      [BUGFix] Improve multi-processing training (#526) · cdfca992
      Da Zheng authored
      * fix.
      
      * add comment.
      
      * remove.
      
      * temp fix.
      
      * initialize for shared memory.
      
      * fix graphsage.
      
      * fix gcn.
      
      * add more unit tests.
      
      * add more tests.
      
      * avoid creating shared-memory exclusively.
      
      * redefine remote initializer.
      
      * improve initializer.
      
      * fix unit test.
      
      * fix lint.
      
      * fix lint.
      
      * initialize data in the graph store server properly.
      
      * fix test.
      
      * fix test.
      
      * fix test.
      
      * small fix.
      
      * add comments.
      
      * cleanup server.
      
      * test graph store with a random port.
      
      * print.
      
      * print to stderr.
      
      * test1
      
      * test2
      
      * remove comment.
      
      * adjust the initializer signature.
      cdfca992
  23. 07 May, 2019 1 commit
    • Da Zheng's avatar
      [Model] add multiprocessing training with sampling. (#484) · 3a1392e6
      Da Zheng authored
      * reorganize sampling code.
      
      * add multi-process training.
      
      * speed up gcn_cv
      
      * fix graphsage_cv.
      
      * add new API in graph store.
      
      * update barrier impl.
      
      * support both local and distributed training.
      
      * fix multiprocess train.
      
      * fix.
      
      * fix barrier.
      
      * add script for loading data.
      
      * multiprocessing sampling.
      
      * accel training.
      
      * replace pull with spmv for speedup.
      
      * nodeflow copy from parent with context.
      
      * enable GPU.
      
      * fix a bug in graph store.
      
      * enable multi-GPU training.
      
      * fix lint.
      
      * add comments.
      
      * rename to run_store_server.py
      
      * fix gcn_cv.
      
      * fix a minor bug in sampler.
      
      * handle error better in graph store.
      
      * improve graphsage_cv for distributed mode.
      
      * update README.
      
      * fix.
      
      * update.
      3a1392e6
  24. 25 Apr, 2019 1 commit
  25. 22 Apr, 2019 1 commit
  26. 17 Apr, 2019 1 commit
  27. 16 Apr, 2019 1 commit
    • Chao Ma's avatar
      [RPC] Refactoring networking APIs (#496) · b89dcce1
      Chao Ma authored
      * Refactoring network API
      
      * update demo
      
      * update
      
      * update demo
      
      * update demo
      
      * add num_sender
      
      * update
      
      * fix lint
      
      * fix lint
      
      * fix lint
      
      * update
      b89dcce1
  28. 11 Apr, 2019 1 commit
  29. 10 Apr, 2019 1 commit
  30. 05 Apr, 2019 1 commit
  31. 03 Apr, 2019 1 commit
    • Chao Ma's avatar
      Add demo for distributed sampler (#474) · da3ab84c
      Chao Ma authored
      * add C++ rpc infrastructure and distributed sampler
      
      * update
      
      * update lint
      
      * update lint
      
      * update lint
      
      * update
      
      * update
      
      * update
      
      * updare
      
      * update
      
      * update
      
      * update
      
      * update serialize and unittest
      
      * update serialize
      
      * lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update unittest
      
      * put Finalize() to __del__
      
      * update unittest
      
      * update
      
      * delete buffer in Finalize
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update unittest
      
      * update
      
      * update
      
      * fix small bug
      
      * windows socket impl
      
      * update API
      
      * fix bug in serialize
      
      * fix bug in serialzie
      
      * set parent graph
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * fix
      
      * fix windows compilation error
      
      * fix windows error
      
      * change API to lower-case
      
      * update test
      
      * fix typo
      
      * update
      
      * add SamplerPool
      
      * add SamplerPool
      
      * update
      
      * update test
      
      * update
      
      * update
      
      * update
      
      * update
      
      * add example
      
      * update
      
      * update
      
      * add distributed sampler demo
      
      * add index
      
      * update demo of distributed sampler
      
      * fix lower-case
      
      * print subg index
      
      * update README.md
      
      * update
      
      * remove --gpu args
      da3ab84c
  32. 05 Mar, 2019 1 commit
    • Minjie Wang's avatar
      [Refactor] Nodeflow, sampling, CAPI (#430) · ca2a7e1c
      Minjie Wang authored
      * enable cython
      
      * add helper function and data structure for void_p vector return
      
      * move sampler from graph index to contrib.sampling
      
      * WIP
      
      * WIP
      
      * refactor layer sampling
      
      * pass tests
      
      * fix lint
      
      * fix graphsage
      
      * remove comments
      
      * pickle test
      
      * fix comments
      
      * update dev guide for cython build
      ca2a7e1c
  33. 28 Feb, 2019 1 commit