1. 19 Jan, 2020 1 commit
    • VoVAllen's avatar
      [Tensorflow] Several nn & example (#1191) · a00636a0
      VoVAllen authored
      * several nn example
      
      * appnp
      
      * fix lint
      
      * lint
      
      * add dgi
      
      * fix
      
      * fix
      
      * fix
      
      * fff
      
      * docs
      
      * 111
      
      * fix
      
      * change init
      
      * change result
      
      * tiaocan+1
      
      * fix
      
      * fix lint
      
      * fix
      
      * fix
      a00636a0
  2. 09 Jan, 2020 2 commits
  3. 06 Jan, 2020 1 commit
  4. 30 Dec, 2019 2 commits
    • Chao Ma's avatar
      [KVStore] Reduce memory cost of kvstore (#1156) · 6731ea3a
      Chao Ma authored
      * API change of kvstore
      
      * add demo for kvstore
      
      * update
      
      * remove duplicated log
      
      * change queue size
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * change name
      
      * update
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * change message queue size to a python argument
      
      * change default queue size to 2GB
      
      * OMP_NUM_THREADS=1
      
      * add multiple NICs support for kvstore
      
      * test
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      6731ea3a
    • Chao Ma's avatar
      [KVStore] Made kvstore can support multiple NICs (#1150) · 4f02bb75
      Chao Ma authored
      * API change of kvstore
      
      * add demo for kvstore
      
      * update
      
      * remove duplicated log
      
      * change queue size
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * change name
      
      * update
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * change message queue size to a python argument
      
      * change default queue size to 2GB
      
      * OMP_NUM_THREADS=1
      
      * add multiple NICs support for kvstore
      
      * test
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      4f02bb75
  5. 25 Dec, 2019 1 commit
    • Chao Ma's avatar
      [Small Fix] Change default message queue size of communicator to 2GB (#1140) · d57ff78d
      Chao Ma authored
      * API change of kvstore
      
      * add demo for kvstore
      
      * update
      
      * remove duplicated log
      
      * change queue size
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * change name
      
      * update
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * change message queue size to a python argument
      
      * change default queue size to 2GB
      
      * OMP_NUM_THREADS=1
      d57ff78d
  6. 24 Dec, 2019 1 commit
    • Chao Ma's avatar
      [KVStore] API change of kvstore (#1058) · e4ef8d1a
      Chao Ma authored
      * API change of kvstore
      
      * add demo for kvstore
      
      * update
      
      * remove duplicated log
      
      * change queue size
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * update
      
      * fix lint
      
      * change name
      
      * update
      
      * fix lint
      
      * update
      
      * update
      
      * update
      
      * update
      
      * change message queue size to a python argument
      e4ef8d1a
  7. 23 Dec, 2019 1 commit
  8. 20 Dec, 2019 1 commit
    • VoVAllen's avatar
      [Backend] TF backend (#978) · d30a69bf
      VoVAllen authored
      * tf
      
      * add builtin support
      
      * fiix
      
      * pytest
      
      * fix
      
      * fix
      
      * fix some bugs
      
      * fix selecting
      
      * fix todo
      
      * fix test
      
      * fix test fail in tf
      
      * fix
      
      * fix
      
      * fix gather row
      
      * fix gather row
      
      * log backend
      
      * fix gather row
      
      * fix gather row
      
      * fix for pytorch
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix tests
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix convert
      
      * fix
      
      * fix
      
      * fix
      
      * fix inplace
      
      * add alignment setting
      
      * add debug option
      
      * Revert "add alignment setting"
      
      This reverts commit ec63fb3506ea84fff7d447a1fbdfd1d5d1fb6110.
      
      * tf ci
      
      * fix lint
      
      * fix lint
      
      * add tfdlpack
      
      * fix type
      
      * add env
      
      * fix backend
      
      * fix
      
      * fix tests
      
      * remove one_hot
      
      * remove comment
      
      * remove comment
      
      * fix
      
      * use pip to install all
      
      * fix test
      
      * fix base
      
      * fix
      
      * fix
      
      * add skip
      
      * upgrade cmake
      
      * change version
      
      * change ci
      
      * fix
      
      * fix
      
      * fix
      
      * fix
      
      * fix seg fault
      
      * fix
      
      * fix python version
      
      * fix
      
      * try fix
      
      * fix
      
      * fix
      
      * tf takes longer time in ci
      
      * change py version
      
      * fix
      
      * fix
      
      * fix oom
      
      * change kg env
      
      * change kg env
      
      * 啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊啊
      
      * 我再也不搞各种乱七八糟环境了……
      
      * use pytest
      
      * Chang image
      d30a69bf
  9. 19 Dec, 2019 1 commit
    • Mufei Li's avatar
      [Chem] ACNN and various utilities (#1117) · cf9ba90f
      Mufei Li authored
      * Add several splitting methods
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Fix
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Fix
      
      * Fix
      
      * Fix
      
      * Fix
      
      * Fix
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Update
      
      * Finally
      
      * CI
      cf9ba90f
  10. 14 Dec, 2019 2 commits
  11. 05 Dec, 2019 1 commit
  12. 04 Dec, 2019 1 commit
  13. 30 Nov, 2019 1 commit
  14. 26 Nov, 2019 2 commits
  15. 13 Nov, 2019 1 commit
  16. 08 Nov, 2019 1 commit
  17. 05 Nov, 2019 1 commit
  18. 04 Nov, 2019 2 commits
  19. 03 Nov, 2019 1 commit
    • Zihao Ye's avatar
      [NN] nn modules & examples update (#890) · 9a0511c8
      Zihao Ye authored
      * upd
      
      * damn it
      
      * fuck
      
      * fuck pylint
      
      * fudge
      
      * remove some comments about MXNet
      
      * upd
      
      * upd
      
      * damn it
      
      * damn it
      
      * fuck
      
      * fuck
      
      * upd
      
      * upd
      
      * pylint bastard
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      
      * upd
      9a0511c8
  20. 30 Oct, 2019 1 commit
    • xiang song(charlie.song)'s avatar
      [Bug Fix] Fix package reliability bug of networkx (#949) · 82499e60
      xiang song(charlie.song) authored
      * upd
      
      * fig edgebatch edges
      
      * add test
      
      * trigger
      
      * Update README.md for pytorch PinSage example.
      
      Add noting that the PinSage model example under
      example/pytorch/recommendation only work with Python 3.6+
      as its dataset loader depends on stanfordnlp package
      which work only with Python 3.6+.
      
      * Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
      
      1. make dgl.nn.xxx frame agnostic
      2. make test.backend include dgl.nn modules
      3. modify test_edge_softmax of test/mxnet/test_nn.py and
          test/pytorch/test_nn.py work on both CPU and GPU
      
      * Fix style
      
      * Delete unused code
      
      * Make agnostic test only related to tests/backend
      
      1. clear all agnostic related code in dgl.nn
      2. make test_graph_conv agnostic to cpu/gpu
      
      * Fix code style
      
      * fix
      
      * doc
      
      * Make all test code under tests.mxnet/pytorch.test_nn.py
      work on both CPU and GPU.
      
      * Fix syntex
      
      * Remove rand
      
      * Add TAGCN nn.module and example
      
      * Now tagcn can run on CPU.
      
      * Add unitest for TGConv
      
      * Fix style
      
      * For pubmed dataset, using --lr=0.005 can achieve better acc
      
      * Fix style
      
      * Fix some descriptions
      
      * trigger
      
      * Fix doc
      
      * Add nn.TGConv and example
      
      * Fix bug
      
      * Update data in mxnet.tagcn test acc.
      
      * Fix some comments and code
      
      * delete useless code
      
      * Fix namming
      
      * Fix bug
      
      * Fix bug
      
      * Add test for mxnet TAGCov
      
      * Add test code for mxnet TAGCov
      
      * Update some docs
      
      * Fix some code
      
      * Update docs dgl.nn.mxnet
      
      * Update weight init
      
      * Fix
      
      * reproduce the bug
      
      * Fix concurrency bug reported at #755.
      Also make test_shared_mem_store.py more deterministic.
      
      * Update test_shared_mem_store.py
      
      * Update dmlc/core
      
      * networkx >= 2.4 will break our examples
      
      * Update tutorials/requirements
      
      * fix selfloop edges
      
      * upd version
      82499e60
  21. 29 Oct, 2019 2 commits
  22. 26 Oct, 2019 1 commit
  23. 25 Oct, 2019 1 commit
  24. 21 Oct, 2019 4 commits
  25. 30 Sep, 2019 1 commit
  26. 29 Sep, 2019 1 commit
    • Minjie Wang's avatar
      [Hetero][Model] RGCN for heterogeneous input (#885) · 1c91f460
      Minjie Wang authored
      * new hetero RGCN
      
      * bgs running
      
      * fix gpu
      
      * am dataset
      
      * fix bug in label preparation
      
      * Fix AM training; add result
      
      * rm sym link
      
      * new embed layer; mutag
      
      * mutag matched; other fix
      
      * minor fix
      
      * dataset refactor
      
      * new data loading
      
      * rm old files
      
      * refactor
      
      * docstring
      
      * include literal nodes in AIFB dataset
      
      * address comments
      
      * docstring
      1c91f460
  27. 28 Sep, 2019 1 commit
    • Zardinality's avatar
      [Model] Add Pytorch example for Cluster GCN (#877) · 51a73504
      Zardinality authored
      * initial commit of cluster GCN
      
      * update readme
      
      * fix small bugs running ppi
      
      * nearly sota ppi training script&update readme
      
      * rm unused imports&add shebang line to scripts
      
      * minor comments&readme appended
      
      * add rnd seed control&update readme
      51a73504
  28. 27 Sep, 2019 1 commit
    • Mufei Li's avatar
      [Model][Hetero] HAN (#868) · c03046a0
      Mufei Li authored
      * Add HAN
      
      * Fix
      
      * WIP; load raw ACM dataset
      
      * DGL's own preprocessing with metapath coalescer
      
      * various fixes
      
      * comparison against simple logistic regression
      
      * rename
      
      * fix test
      c03046a0
  29. 26 Sep, 2019 2 commits
  30. 11 Sep, 2019 1 commit