GitLab

* first commit

* some thoughts

* move around

* more commit

* more fixes

* now it uses torch allocator

* fix symbol export error

* fix

* fixes

* test fix

* add script

* building separate library per version

* fix for vs2019

* more fixes

* fix on windows build

* update jenkinsfile

* auto copy built dlls for windows

* lint and installation guide update

* fix

* specify conda environment

* set environment for ci

* fix

* fix

* fix

* fix again

* revert

* fix cmake

* fix

* switch to using python interpreter path

* remove scripts

* debug

* oops sorry

* Update index.rst

* Update index.rst

* copies automatically, no need for this

* do not print message if library not found

* tiny fixes

* debug on nightly

* replace add_compile_definitions to make CMake 3.5 happy

* fix linking to wrong lib for multiple pytorch envs

* changed building strategy

* fix nightly

* fix windows

* fix windows again

* setup bugfix

* address comments

* change README

* upd

* fix-link

* lint

* Update gatedgraphconv.py

* Update entity_classify.py

* Update data-process.rst

* Update reading_data.py

* Update data-process.rst

* Update utils.py

* Update knowledge_graph.py

* Update entity_classify.py

* Update rdf.py

* Update entity_classify_mb.py

* Update test_classify.py

* Update tensor.py

* Update sparse.py

* Update entity_classify_mp.py

* Update 6_line_graph.py

Co-authored-by: Ubuntu <ubuntu@ip-172-31-57-25.ec2.internal>

The variable name 'eid' should be 'nid'

* Update

* Update

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

* move image to s3 server.

* fix links and ref

* Hide implementations that may cause confusions to the user

* upd

* lint

* lint1

* Update

* Update

* Update

* Update

* Update

* speed up batching

* more fix

* lint

* fix

* upd

* upd

* update

* upd

* upd

* upd

* fix

* lint

* lint

* pylint

* doc

* Update

* Update

* Update

The l in "bool" is lost.
Co-authored-by: Zihao Ye <expye@outlook.com>

* add support for cuda 11

* fix inc bug in pytorch 1.8

* poke ci

* fix

* small fix

* try fix

* try fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* Disable copying for anywhere but the GPU

* Remove unused import and remove references to transferring from the GPU from the docs

* Skip gpu test in cpu mode
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.

* check whether the original labels are valid

* add unit test for gin dataset

* bug of asscalar in mxnet<=1.6

* mxnet<=1.6 asscalar requires ndarray to be shaped (1,)

* skip gpu while testing datasets

* Update test_data.py

* test of gin dataset takes too much time

[Performance] In HeteroNodeView, build arange on target device, instead of on CPU and copying it (#2266)

* Build arange on target device

* Utilize arange device in viewpy:HeteroNodeView.__call__

* Work around uint64 error in TF to_dlpack

* Restore else clause
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Da Zheng <zhengda1936@gmail.com>

* Update docs

* Make non-default streams non-blocking

* Add async transferer class

* Add async ndarray copy interface

* Add python bindings

* Fix comment

* Add python class

* Fix linting issues

* Add python unit test

* Update python interface

* move async_transferer to cuda only directory

* Fix linting issue

* Move out of contrib

* Add doc strings

* Move test compute from backend

* Update comment

* Fix test naming

* Fix argument usage

* Wrap/unwrap backend parameters

* Move to dataloading

* Move to 'dataloading'

* Make GPU/CPU compatible

* Fix unit tests

* Add docs

* Use only backend interface for datamovement in unit test

* upd

* upd

* upd

* upd

* upd

* fix OpenMP compatibility issues

* typo

* partition

* misc

* fix typo

* num_parts=1

* import torch

* long

* print info

* print info

* print info

* upd

* remove debug code

* revert partition.py

* fix cut count

* fix cut count

* Revert "fix cut count"

This reverts commit 10926b4fd48f45c8f1ddb58be7db6c22e653effd.

* Revert "fix cut count"

This reverts commit 76465283bef093a2b4209ad70dd15d2437b2ec8a.

* type of deprecate

* typo in deprecate info

* fix typo

* use cv for partitioning

* CE

* no message

* revert

* typo

* no message

* no message

* no message

* practice

* dmlc-core

* DGLGraph
Co-authored-by: yzh119 <expye@outlook.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

[Bugfix][Performance] Fix Column to copy 'self.index' to location of 'self.storage' only on read, and use kwargs. (#2267)

* Pass framework arguments to copy of frames

* Copy for subframe

* Fix mismatched contexts
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

An unexpected `AttributeError` exception is launched whenever the user defines `save_dir` on `DGLDataset` instantiation and uses `self._save_dir`  within `has_cache` method.
This commit fixes the issue.

* udp

* add test

* udp

* fix mxnet

Co-authored-by: Chao Ma <mctt90@gmail.com>

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

[HeteroGraph] Fix the failure of apply_nodes when the input function changes feature size for all nodes (#2223)

* Fix

* Fix

* fix doc

* fix doc

* Fix doc and user guide

* Update heterograph.py
Co-authored-by: Ubuntu <ubuntu@ip-172-31-13-9.us-west-2.compute.internal>

* fix node and edge dataloader on windows

* fix distributed

* Update Doc for UDFs

* add degree bucketing explanation

* Update udf.rst

* Update
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>

* update dmlc-core to latest

* fix hdfs

* fix dataloading docs

* fix another

* fix cumsum

* udp
Co-authored-by: Zihao <expye@outlook.com>

* [Bugfix] fix TUDataset labelling issue (#2165)

* [Bugfix] fix TUDataset labelling issue (dmlc#2165)

* update docstring according to discussion
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>