base_mp.yaml

name: "base_mp" # identifier of this specific set of params for config
transforms: "BaseMoreAug" # name of the augmentation modue to use

selected_data_channels:
selected_seg_channels:

p_eldef: 0.2
do_elastic: False
elastic_deform_alpha: [0., 900.]
elastic_deform_sigma: [9., 13.]

p_scale: 0.3
do_scaling: True
scale_range: [0.85, 1.25]
independent_scale_factor_for_each_axis: False

p_rot: 0.3
do_rotation: True
rotation_x: [-15, 15]
rotation_y: [-15, 15]
rotation_z: [-15, 15]

order_data: 3
border_mode_data: "constant"
border_cval_data: 0
order_seg: 0
border_cval_seg: -1
border_mode_seg: "constant"

random_crop: False
random_crop_dist_to_border:

p_gamma: 0.3
do_gamma: True
gamma_retain_stats: True
gamma_range: [0.7, 1.5]

do_mirror: True
mirror_axes: [0, 1, 2]

do_additive_brightness: False
additive_brightness_p_per_sample: 0.15
additive_brightness_p_per_channel: 0.5
additive_brightness_mu: 0.0
additive_brightness_sigma: 0.1

2d_overwrites:
  elastic_deform_alpha: [0., 200.]
  elastic_deform_sigma: [9., 13.]
  rotation_x: [-180, 180]
  rotation_y: [0, 0]
  rotation_z: [0, 0]
  dummy_2D: False
  mirror_axes: [0, 1]