GitLab

**Description**
Add support for both jsonl and json format in data diagnosis.

**Major Revision**
- Add support for both jsonl and json format in data diagnosis


**Minor Revision**
- change related doc
- add jsonl support in cli

__Description__

Update Python setup for require packages.

__Major Revisions__
* downgrade requests version to be compatible with python 3.6, add corresponding pipeline for 3.6
* add extra entry in extras_require for nested packages
* update `pip install` contents accordingly

* Support topo-aware IB performance validation

Add a new pattern `topo-aware`, so the user can run IB performance
test based on VM's topology information. This way, the user can
validate the IB performance across VM pairs with different distance
as a quick test instead of pair-wise test.

To run with topo-aware pattern, user needs to specify three required
(and two optional) parameters in YAML config file:
--pattern	topo-aware
--ibstat	path to ibstat output
--ibnetdiscover	path to ibnetdiscover output
--min_dist	minimum distance of VM pairs (optional, default 2)
--max_dist	maximum distance of VM pairs (optional, default 6)

The newly added topo_aware module then parses the topology
information, builds a graph, and generates the VM pairs with
the specified distance (# hops).

The specified IB test will then be running across these
generated VM pairs.
Signed-off-by: Jie Zhang <jessezhang1010@gmail.com>

* Add description about topology aware ib traffic tests
Signed-off-by: Jie Zhang <jessezhang1010@gmail.com>

* Add unit test to verify generated topology aware config file

This commit adds unit test to verify the generated topology aware
config file is correct. To do so, four new data files are added in
order to invoke gen_topo_aware_config function to generate topology
aware config file, then compares it with the expected config file.
Signed-off-by: Jie Zhang <jessezhang1010@gmail.com>

* Fix lint issue on Azure pipeline
Signed-off-by: Jie Zhang <jessezhang1010@gmail.com>

Support `node_num: 1` in mpi mode, so that we can run mpi benchmarks in
both 1 node and all nodes in one config by changing `node_num`.
Update docs and add test case accordingly.

Fix several issues in ib loopback benchmark:
* use `--report_gbits` and divide by 8 to get GB/s, previous results are
  MiB/s / 1000
* use the ib_write_bw binary built in third_party instead of system path
* update the metrics name so that different hca indices have same metric

**Description**

Support multiple IB/GPU devices run simultaneously in ib validation benchmark.

**Major Revisions**
- Revise ib_validation_performance.cc so that multiple processes per node could be used to launch multiple perftest commands simultaneously. For each node pair in the config, number of processes per node will run in parallel.
- Revise ib_validation_performance.py to correct file paths and adjust parameters to specify different NICs/GPUs/NUMA nodes.
- Fix env issues in Dockerfile for end-to-end test.
- Update ib-traffic configuration examples in config files.
- Update unit tests and docs accordingly.

Closes #326.

**Description**

Support `sb run` on host directly without Docker

**Major Revisions**
- Add `--no-docker` argument for `sb run`.
- Run on host directly if `--no-docker` if specified.
- Update docs and tests correspondingly.

**Description**

Cherry-pick  bug fixes from v0.5.0 to main.

**Major Revisions**

* Bug - Force to fix ort version as '1.10.0' (#343)
* Bug - Support no matching rules and unify the output name in result_summary (#345)
* Analyzer - Support regex in annotations of benchmark naming for metrics in rules (#344)
* Bug - Fix bugs in sync results on root rank for e2e model benchmarks (#342)
* Bug - Fix bug of duration feature for model benchmarks in distributed mode (#347)
* Docs - Upgrade version and release note (#348)
Co-authored-by: Yuting Jiang <v-yutjiang@microsoft.com>

**Description**
Update links of referencing other docs using relative file paths with extensions.

**Description**
Fixes relative link in documentation: point to `../cli.md`.

**Description**
Integrate output all nodes diagnosis results.

**Description**
Add usage for result summary.

**Description**
Integrage result summary and update output format of data diagnosis.

**Major Revision**
- integrage result summary 
- add md and html format for data diagnosis

**Description**
Use config `log_raw_data` to control whether log the raw data into file or not. The default value is `no`. We can set it as `yes` for some particular benchmarks to save the raw data into file, such as NCCL/RCCL test.

**Description**
Modifications adding GPU-Burn to SuperBench.
- added third party submodule
- modified Makefile to make gpu-burn binary
- added/modified microbenchmarks to add gpu-burn python scripts
- modified default and azure_ndv4 configs to add gpu-burn

**Description**
Add multi-rules feature for data diagnosis to support multiple rules' combined check.

**Major Revision**
- revise rule design to support multiple rules combination check
- update related codes and tests

**Description**
This commit remove NUMA binding for device-to-device tests because NUMA doesn't affect performance, and revise benchmark metrics accordingly.

Fix typo in document.

Support customized env for all modes in configuration.

**Description**
Add timeout feature for each benchmark.

**Major Revision**
- Add `timeout` config for each benchmark. In current config files, only set the timeout for kernel-launch as example. Other benchmarks can be set in the future.
- Set the timeout config for `ansible_runner.run()`. Runner will get the return code 254:
   [ansible.py:80][WARNING] Run failed, return code 254.
- Using `timeout` command to terminate the client process.

__Description__

Update benchmark naming to support annotations.

__Major Revisions__
- Update name for `create_benchmark_context` in executor.
- Backward compatibility for model benchmarks using "_models" suffix.
- Update documents.

**Description**
This commit adds bidirectional tests in gpu_copy benchmark for both device-host transfer and device-device transfer, and revises related tests.

**Description**
Add 50th, 90th, 95th, 99th, 99.9th latency metrics for ORT and pytorch inference benchmarks.

__Description__

Add command `sb benchmark list` and `sb benchmark list-parameters` to support listing all optional parameters for benchmarks.

<details>
<summary>Examples</summary>
<pre>
$ sb benchmark list -n [a-z]+-bw -o table
Result
--------
mem-bw
nccl-bw
rccl-bw
</pre>
<pre>
$ sb benchmark list-parameters -n mem-bw
=== mem-bw ===
optional arguments:
  --bin_dir str         Specify the directory of the benchmark binary.
  --duration int        The elapsed time of benchmark in seconds.
  --mem_type str [str ...]
                        Memory types to benchmark. E.g. htod dtoh dtod.
  --memory str          Memory argument for bandwidthtest. E.g. pinned unpinned.
  --run_count int       The run count of benchmark.
  --shmoo_mode          Enable shmoo mode for bandwidthtest.
default values:
{'bin_dir': None,
 'duration': 0,
 'mem_type': ['htod', 'dtoh'],
 'memory': 'pinned',
 'run_count': 1}
</pre>
</details>

__Major Revisions__
* Add `sb benchmark list` to list benchmarks matching given name.
* Add `sb benchmark list-parameters` to list parameters for benchmarks which match given name.

__Minor Revisions__
* Sort format help text for argparse.

__Description__

Cherry-pick  bug fixes from v0.4.0 to main.

__Major Revisions__

* Bug - Fix issues for Ansible and benchmarks (#267)
* Tests - Refine test cases for microbenchmark (#268)
* Bug - Build openmpi with ucx support in rocm dockerfiles (#269)
* Benchmarks: Fix Bug - Fix fio build issue (#272)
* Docs - Unify metric and add doc for cublas and cudnn functions (#271)
* Monitor: Revision - Add 'monitor/' prefix to monitor metrics in result summary (#274)
* Bug - Fix bug of detecting if gpu_index is none (#275)
* Bug - Fix bugs in data diagnosis (#273)
* Bug - Fix issue that the root mpi rank may not be the first in the hostfile (#270)
* Benchmarks: Configuration - Update inference and network benchmarks in configs (#276)
* Docs - Upgrade version and release note (#277)
Co-authored-by: Yuting Jiang <v-yutjiang@microsoft.com>

**Description**
Add usage for data diagnosis.

**Description**
Update docs for monitor.

Add transformers for TensorRT inference.

**Description**
Add benchmark metrics for cpu-memory-bw-latency.

**Description**
Minor doc change to highlight sb CLI version is independent of the sb container version.

**Description**
Add ONNXRuntime inference benchmark based on ORT python API.

**Major Revision**
- Add `ORTInferenceBenchmark` class to export pytorch model to onnx model and do inference
- Add tests and example for `ort-inference` benchmark
- Update the introduction docs.

**Description**
Integrate monitor into Superbench.

**Major Revision**
- Initialize, start and stop monitor in SB executor.
- Parse the monitor data in SB runner and merge into benchmark results.
- Specify ReduceType for monitor metrics, such as MAX, MIN and LAST.
- Add monitor configs into config file.

**Description**
Unify metric names of benchmarks.

**Description**
Add doc for data diagnosis, including input, output and baseline file schema.

**Description**
Update ib validtion mirobenchmark metrics.

**Description**

Update gpu-copy benchmark metrics.

__Description__

Add TensorRT inference benchmark for torchvision models.

__Major Revision__
- Measure TensorRT inference performance.

**Description**

Update docs to add network benchmarks for tcp and gpcnet.

Update docs to add ORT AMD benchmarks based on docker.

Add introduction and metrics for micro-benchmarks and model-benchmarks document.