Commits · d71e72fdca5ab2ad4adc1da5985e6db261ea3456 · tsoc / openmm

14 Dec, 2012 1 commit
- Lots of updates for version 5.0 · d71e72fd
  Peter Eastman authored Dec 14, 2012
  
  d71e72fd
06 Dec, 2012 1 commit
- Updates to chapter titles. Moved Intro and Installation chapters to the very beginning. · 066c571e
  Joy Ku authored Dec 06, 2012
  
  066c571e
04 Dec, 2012 1 commit
- Merged Application Guide into User Guide · 4b0fc0a1
  Peter Eastman authored Dec 04, 2012
  
  4b0fc0a1
25 Apr, 2012 1 commit
- Documentation updates for 4.1. Created new PDFs. · 191bca72
  Peter Eastman authored Apr 25, 2012
  
  191bca72
05 Apr, 2012 1 commit
- Updated documentation to specify CUDA 4.1. Generated new PDFs of manuals. · 4b623f7e
  Peter Eastman authored Apr 05, 2012
  
  4b623f7e
04 Apr, 2012 1 commit
- Cleaned up and reorganized docs directory · c56b975b
  Peter Eastman authored Apr 04, 2012
  
  c56b975b
03 Apr, 2012 1 commit
- Lots of updates to documentation based on changes in 4.1. · 1d043ff5
  Peter Eastman authored Apr 03, 2012
  
  1d043ff5
18 Feb, 2012 1 commit
- Documentation updates for new featuers in 4.1 · 4cd3207e
  Peter Eastman authored Feb 18, 2012
  
  4cd3207e
08 Feb, 2012 1 commit
- Correct reference · 3836a29f
  Mark Friedrichs authored Feb 08, 2012
  
  3836a29f
11 Jan, 2012 2 commits
- The previous PDFs had markup showing · 25e868e1
  Peter Eastman authored Jan 11, 2012
  
  25e868e1
- Added warning about Windows "Program Compatibility Assistant" · 488b64f6
  Peter Eastman authored Jan 11, 2012
  
  488b64f6
06 Jan, 2012 1 commit
- Minor fixes, added discussion of testInstallation.py script · 9c39f46e
  Peter Eastman authored Jan 06, 2012
  
  9c39f46e
05 Jan, 2012 2 commits
- Edits based on Joy's comments · b66c5425
  Mark Friedrichs authored Jan 05, 2012
  
  b66c5425
- Updated AMOEBA plug-in section and install instructions for 4.0 · d0aba41f
  Joy Ku authored Jan 05, 2012
  
  d0aba41f
13 Dec, 2011 1 commit
- Minor updates to installation instructions · d32d2920
  Peter Eastman authored Dec 13, 2011
  
  d32d2920
29 Nov, 2011 3 commits
- Fixed references for free energy plugin · b79d9e84
  Peter Eastman authored Nov 29, 2011
  
  b79d9e84
- Added John's edit to free energy plugin sectio · e79f0751
  Mark Friedrichs authored Nov 29, 2011
  
  e79f0751
- Final documentation for 4.0 · b39cd4e4
  Peter Eastman authored Nov 29, 2011
  
  b39cd4e4
18 Nov, 2011 2 commits
- Minor documentation updates · 45d017ab
  Peter Eastman authored Nov 18, 2011
  
  45d017ab
- Joy's first pass edits of chapters 1-11 · 51ddfb26
  Joy Ku authored Nov 18, 2011
  
  51ddfb26
14 Nov, 2011 1 commit
- Added Tom's documentation on RPMD plugin. Added section on platform-specific... · 2b3aa37d
  Peter Eastman authored Nov 14, 2011
```
Added Tom's documentation on RPMD plugin.  Added section on platform-specific properties.  Updated installation instructions.
```
  2b3aa37d
07 Nov, 2011 1 commit

Added section describing free energy plugin · 1b4e96da

Mark Friedrichs authored Nov 07, 2011

Removed benchmark sections
Modified page numbering for Part I, Sections 8,9 from Roman numerals to decimal values

1b4e96da

26 Oct, 2011 1 commit
- Began updating manual for 4.0. · 8960d7b2
  Peter Eastman authored Oct 26, 2011
  
  8960d7b2
03 Oct, 2011 1 commit
- Replaced references to usage of OBC algorithm for calculating Born radii in... · e9505f5b
  Mark Friedrichs authored Oct 03, 2011
```
Replaced references to usage of OBC algorithm for calculating Born radii in OpenMM/AMOEBA w/ the Grycuk algorithm
```
  e9505f5b
29 Jul, 2011 2 commits
- Minor documentation updates for 3.1. Created PDFs. · b354e0a1
  Peter Eastman authored Jul 29, 2011
  
  b354e0a1
- Minor edits · 5f127e38
  Mark Friedrichs authored Jul 29, 2011
  
  5f127e38
28 Jul, 2011 1 commit
- Added benchmarks · f3935f4e
  Mark Friedrichs authored Jul 28, 2011
  
  f3935f4e
22 Jul, 2011 2 commits
- addition of OPENMMCUDA_EXPORT for Windows compile · 97c767f8
  Mark Friedrichs authored Jul 22, 2011
  
  97c767f8
- Mods for Release 3.1 · 938c9def
  Mark Friedrichs authored Jul 22, 2011
  
  938c9def
18 Jul, 2011 1 commit
- Updated manual for 3.1 · 6f24ee8a
  Peter Eastman authored Jul 18, 2011
  
  6f24ee8a
24 May, 2011 1 commit
- Added text recommending users download the CVS development version and not the... · 825d4eb6
  Mark Friedrichs authored May 24, 2011
```
Added text recommending users download the CVS development version and not the 0.6 version of gccxml from the gccxml website.
```
  825d4eb6
20 May, 2011 1 commit
- Updated installation instructions and directory names, e.g., for the examples. · 9eb00769
  Joy Ku authored May 20, 2011
  
  9eb00769
17 May, 2011 1 commit
- Fixed a mistake in the Python installation instructions · 798e651a
  Peter Eastman authored May 17, 2011
  
  798e651a
30 Mar, 2011 4 commits
- Created PDF versions of Users Guide and Developer Guide · 23291759
  Peter Eastman authored Mar 30, 2011
  
  23291759
- Update to Amoeba chapter · 24214023
  Mark Friedrichs authored Mar 30, 2011
  
  24214023
- Update to Amoeba chapter · 6dd461c2
  Mark Friedrichs authored Mar 30, 2011
  
  6dd461c2
- Amoeba plugin update · ee3a1104
  Mark Friedrichs authored Mar 30, 2011
  
  ee3a1104
29 Mar, 2011 2 commits
- Update Amoeba chapter w/ benchmarks · 2e3c5dc9
  Mark Friedrichs authored Mar 29, 2011
  
  2e3c5dc9
- Minor updates to the manual · 5ecd467a
  Peter Eastman authored Mar 29, 2011
  
  5ecd467a
26 Mar, 2011 1 commit
- Update for Amoeba · 80ae6d45
  Mark Friedrichs authored Mar 26, 2011
  
  80ae6d45