Commits · ce0cc4e0c232c3f413fd67c18033ddec46e6d03c · tsoc / openmm

13 Dec, 2010 1 commit
- Debye constant was set for kcal/A units; updated to kJ/nm units · ce0cc4e0
  Mark Friedrichs authored Dec 13, 2010
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Bug in Urey-Bradley force calculation fixed
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  ce0cc4e0
10 Dec, 2010 1 commit
- Fixed bug in Vdw w/o cutoffs if bOutputBufferPerWarp is set · 1b5ee8f9
  Mark Friedrichs authored Dec 10, 2010
  
  1b5ee8f9
02 Dec, 2010 1 commit
- Added torque mapping code (untested) · 72a8bb80
  Mark Friedrichs authored Dec 02, 2010
  
  72a8bb80
20 Nov, 2010 1 commit
- Adding z-bisect, 3-fold and z-only · 8b005aac
  Mark Friedrichs authored Nov 20, 2010
  
  8b005aac
19 Nov, 2010 1 commit
- Decouple multipole & vdw cutoff · 0d78f22f
  Mark Friedrichs authored Nov 19, 2010
  
  0d78f22f
18 Nov, 2010 1 commit
- Added checkChiral for chiral systems (Reference/Cuda) · 09fb3811
  Mark Friedrichs authored Nov 18, 2010
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Added support for missing axis types (Cuda only)
Removed rotationMatrix
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  09fb3811
10 Nov, 2010 3 commits
- Mods for Urey-Bradley · cbfff447
  Mark Friedrichs authored Nov 10, 2010
  
  cbfff447
- Reference code for Urey-Bradley · d1b954c7
  Mark Friedrichs authored Nov 10, 2010
  
  d1b954c7
- Added Urey-Bradley term · 3405e1cb
  Mark Friedrichs authored Nov 10, 2010
  
  3405e1cb
26 Oct, 2010 1 commit
- Mods for wrapper code; added yAxis parameter to multipole force-field · 0cae89d3
  Mark Friedrichs authored Oct 26, 2010
  
  0cae89d3
18 Oct, 2010 1 commit
- Code to map torques onto forces · a33839b0
  Mark Friedrichs authored Oct 18, 2010
  
  a33839b0
13 Oct, 2010 2 commits
- Mods to reduce calculation of ixns within blocks for Vdw · 50a15fb0
  Mark Friedrichs authored Oct 13, 2010
  
  50a15fb0
- Mods for Windows compile · 7752cbf1
  Mark Friedrichs authored Oct 13, 2010
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Renamed files to be consistent w/ other file names
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  7752cbf1
09 Oct, 2010 1 commit
- Cutoffs/PBC for Vdw force · b8e12104
  Mark Friedrichs authored Oct 09, 2010
  
  b8e12104
07 Oct, 2010 3 commits
- Optimizations to PME · 408469c3
  Peter Eastman authored Oct 07, 2010
  
  408469c3
- Optimizations to PME · 35c974f6
  Peter Eastman authored Oct 07, 2010
  
  35c974f6
- Optimizations to PME direct space computation · 92a338cf
  Peter Eastman authored Oct 07, 2010
  
  92a338cf
06 Oct, 2010 2 commits
- Fix for direct PME · b20978e1
  Mark Friedrichs authored Oct 06, 2010
  
  b20978e1
- Mods for direct PME · a9054686
  Mark Friedrichs authored Oct 06, 2010
  
  a9054686
04 Oct, 2010 2 commits
- Eliminated redundant computation of fixed multipole PME · a60e9cf1
  Peter Eastman authored Oct 04, 2010
  
  a60e9cf1
- Optimizations to PME · 773dd0f0
  Peter Eastman authored Oct 04, 2010
  
  773dd0f0
01 Oct, 2010 2 commits
- Created CudaForceInfo subclasses for all the Amoeba forces · 95f1884c
  Peter Eastman authored Oct 01, 2010
  
  95f1884c
- PME mods · 6b0ad778
  Mark Friedrichs authored Oct 01, 2010
  
  6b0ad778
30 Sep, 2010 4 commits
- Reduced memory use · 3b45e509
  Peter Eastman authored Sep 30, 2010
  
  3b45e509
- Edited electrostatic calculation in AmoebaReferenceMultipoleForce · 2136b00f
  Mark Friedrichs authored Sep 30, 2010
  
  2136b00f
- Cleaned up for Windows compile · c6b1fa83
  Mark Friedrichs authored Sep 30, 2010
  
  c6b1fa83
- Initial AmoebaReferenceMultipoleForce · e20cc4f2
  Mark Friedrichs authored Sep 30, 2010
  
  e20cc4f2
29 Sep, 2010 3 commits
- More cleanup for Windows compilation · 3cae6a22
  Mark Friedrichs authored Sep 29, 2010
  
  3cae6a22
- Cleanup for Windows compile · f224fe20
  Mark Friedrichs authored Sep 29, 2010
  
  f224fe20
- Removed unnecessary clearing array · 73b55e33
  Peter Eastman authored Sep 29, 2010
  
  73b55e33
28 Sep, 2010 2 commits
- Fixing bugs in AMOEBA PME reciprocal space calculation · 5698a1fc
  Peter Eastman authored Sep 28, 2010
  
  5698a1fc
- Fixed PmeDirectElectrostatic energy · ad1b1ad1
  Mark Friedrichs authored Sep 28, 2010
  
  ad1b1ad1
27 Sep, 2010 2 commits
- Fixed scaling parameter bug · 1224ac17
  Mark Friedrichs authored Sep 27, 2010
  
  1224ac17
- Fixing bugs in AMOEBA PME reciprocal space calculation · 2a03c44f
  Peter Eastman authored Sep 27, 2010
  
  2a03c44f
24 Sep, 2010 1 commit
- Include cctype · 56a55129
  Mark Friedrichs authored Sep 24, 2010
  
  56a55129
23 Sep, 2010 1 commit
- Fixed compilation errors · 8c63200f
  Peter Eastman authored Sep 23, 2010
  
  8c63200f
22 Sep, 2010 2 commits
- Fixed lots of bugs in AMOEBA PME reciprocal space calculation · fa088696
  Peter Eastman authored Sep 22, 2010
  
  fa088696
- Reference WcaDispersionForce · 6ee040ff
  Mark Friedrichs authored Sep 22, 2010
  
  6ee040ff
21 Sep, 2010 2 commits
- Revamp of reference local force classes · a37e41ea
  Mark Friedrichs authored Sep 21, 2010
  
  a37e41ea
- Cuda Vdw test · 3b67aadf
  Mark Friedrichs authored Sep 21, 2010
  
  3b67aadf