GitLab

* Fix import of netcdf_file for scipy 1.14

* Fix indentation

---------
Co-authored-by: Timothy Palpant <tim@atommapper.com>

* Top level Python module is now "openmm"

* Updated module names in examples

* Updated module names in documentation

* Updated module in CI scripts

* Added deprecation warning

Clean up

Fix OpenCL platform on low-end devices

Close file before deleting in TestAmberPrmtopFile.py

Close PDBx file before deleting to fix windows test failure in TestPDbxFile.py

Fix test checkpoint reporter close file before repoening

Add bytes typemap

Update appveyor.yml

Fix exit status

Supress 4305 and 4244 warnings

Print the last failed tests output

Make numpy optional in test

Improve scipy skip too

Refactor TestCheckpointReporter.py to not require numpy

test on the proper file

Remove annoying -V

truncated octahedron inpcrd and prmtop file.

element.

fix the remaining CI issues.

Also make sure .ncrst files are copied over in the test directory.