Commits · 765e274095bb761941e0f2eab36fd79449f3669d · tsoc / openmm

05 Apr, 2017 2 commits
- References in alphabetical order · 96fe37c7
  Lee-Ping Wang authored Apr 05, 2017
  
  96fe37c7
- Added user guide and bibliography entry · 6f80b44e
  Lee-Ping Wang authored Apr 05, 2017
  
  6f80b44e
03 Mar, 2017 2 commits
- better word choice · 256f47a4
  Levi Naden authored Mar 03, 2017
  
  256f47a4
- Fix docs building on Sphinx 1.3.1 and 1.5.1 due to custom text role · b82d3fa2
  Levi Naden authored Mar 03, 2017
  
  b82d3fa2
16 Feb, 2017 1 commit
- Attempt at fixing errors on travis and appveyor · 06fe75fb
  peastman authored Feb 16, 2017
  
  06fe75fb
03 Feb, 2017 1 commit
- Revised calculation for dispersion PME grid size · 8647eaad
  Peter Eastman authored Feb 03, 2017
  
  8647eaad
26 Jan, 2017 1 commit
- Updated documentation for dispersion PME · a9b636aa
  Peter Eastman authored Jan 26, 2017
  
  a9b636aa
12 Jan, 2017 1 commit
- Documentation updates for 7.1 · b3ce5343
  peastman authored Jan 12, 2017
  
  b3ce5343
17 Oct, 2016 1 commit
- Update theory and API docs with correct dihedral range. · 8ae2ee1b
  jchodera authored Oct 17, 2016
  
  8ae2ee1b
06 Oct, 2016 1 commit
- Updated manual to specify CUDA 8.0 · 3654b788
  Peter Eastman authored Oct 06, 2016
  
  3654b788
22 Sep, 2016 1 commit
- ForceField supports CustomHbondForce · e17a4dd8
  peastman authored Sep 22, 2016
  
  e17a4dd8
09 Aug, 2016 1 commit
- Added documentation on GayBerneForce to manual · d676ed8e
  peastman authored Aug 09, 2016
  
  d676ed8e
29 Jul, 2016 1 commit
- Added documentation on parameter derivatives · 68f1f485
  Peter Eastman authored Jul 29, 2016
  
  68f1f485
21 Apr, 2016 1 commit
- Updated documentation for unified property names · 4966bdff
  Peter Eastman authored Apr 21, 2016
  
  4966bdff
07 Apr, 2016 1 commit
- Added documentation on patches · 238a1068
  peastman authored Apr 07, 2016
  
  238a1068
29 Mar, 2016 1 commit
- Added property to request deterministic forces · cddeb60f
  Peter Eastman authored Mar 28, 2016
  
  cddeb60f
25 Mar, 2016 1 commit
- Minor updates to manuals · a45599d2
  peastman authored Mar 25, 2016
  
  a45599d2
11 Mar, 2016 1 commit
- Can build manuals on Windows · e179cadd
  peastman authored Mar 11, 2016
  
  e179cadd
06 Feb, 2016 1 commit
- Fix errors in sphinx formatting for docs · 4f629c8f
  John Chodera (MSKCC) authored Feb 05, 2016
  
  4f629c8f
27 Jan, 2016 1 commit

Added further specificity that State files can be exchanged between · 8f9f0939

Nate Stanley authored Jan 27, 2016

different platforms and OpenMM versions, while Checkpoint files can not
be exchanged between platforms or versions of Openmm.

8f9f0939

21 Jan, 2016 4 commits
- Fixed supported OS X version number · aafe10bc
  peastman authored Jan 21, 2016
  
  aafe10bc
- Minor improvements to manual · 6a4213d8
  peastman authored Jan 21, 2016
  
  6a4213d8
- Add a method for retrieving list of matching templates to ForceField. · 15d1b5fc
  jchodera authored Jan 21, 2016
  
  15d1b5fc
- Updated documentation on installing to discuss conda · 1561f089
  peastman authored Jan 20, 2016
  
  1561f089
20 Jan, 2016 1 commit
- Fix docstrings, docs, and method names. · a4481f54
  John Chodera (MSKCC) authored Jan 20, 2016
  
  a4481f54
19 Jan, 2016 1 commit
- Also return residue templates; add docs. · 818db2b2
  jchodera authored Jan 19, 2016
  
  818db2b2
14 Jan, 2016 1 commit
- Added extrapolated polarization support to Python and to manual · 49cbc791
  Peter Eastman authored Jan 14, 2016
  
  49cbc791
09 Jan, 2016 2 commits
- Fix syntax errors in user guide docs. · 427f8517
  John Chodera (MSKCC) authored Jan 08, 2016
  
  427f8517
- Document how to turn on API docs building. · bb8e2129
  John Chodera (MSKCC) authored Jan 08, 2016
  
  bb8e2129
03 Jan, 2016 1 commit
- Added documentation of residue template generator with admonition that feature... · 01016dea
  John Chodera (MSKCC) authored Jan 02, 2016
```
Added documentation of residue template generator with admonition that feature is experimental and API is subject to change.
```
  01016dea
14 Dec, 2015 1 commit
- Add instructions to build documentation · c4d95a4d
  Robert McGibbon authored Dec 14, 2015
  
  c4d95a4d
21 Nov, 2015 1 commit
- Updated the user guide to clarify how to save simulations results · 4fd6934b
  Nate Stanley authored Nov 20, 2015
```
and progress. Also added a small note about the determinism of
simulations on different platforms.
```
  4fd6934b
16 Nov, 2015 1 commit
- Minor updates to documentation · 7139275a
  Peter Eastman authored Nov 16, 2015
  
  7139275a
11 Nov, 2015 1 commit
- Residue templates can specify atoms by name instead of index · 6391f721
  Peter Eastman authored Nov 11, 2015
  
  6391f721
05 Nov, 2015 1 commit
- Added documentation on CompoundIntegrator · 1a3411a5
  Peter Eastman authored Nov 04, 2015
  
  1a3411a5
28 Oct, 2015 1 commit
- Added documentation for residue template parameters, plus other minor documentation updates · 5d9a166c
  peastman authored Oct 28, 2015
  
  5d9a166c
10 Sep, 2015 1 commit
- Created OPENMM_DEFAULT_PLATFORM environment variable · 3fa88060
  peastman authored Sep 10, 2015
  
  3fa88060
04 Sep, 2015 1 commit
- Improved placement of license information in manuals · 4cf722ab
  peastman authored Sep 04, 2015
  
  4cf722ab
02 Sep, 2015 1 commit
- Added documentation for CustomCentroidBondForce · 03a0e9d2
  peastman authored Sep 02, 2015
  
  03a0e9d2
27 Aug, 2015 1 commit
- Python 2/3 compatibility in single code base, plus python 3 testing on travis. · b7088b74
  peastman authored Aug 10, 2015
  
  b7088b74