Commits · 6a4ac837fc25df78c771ac7a281e5bbdb391f9d0 · tsoc / openmm

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07 Oct, 2014 3 commits
- Parallelized CpuCustomGBForce · 6a4ac837
  peastman authored Oct 07, 2014
  
  6a4ac837
- Further optimizations to CustomGBForce · bb70341a
  peastman authored Oct 07, 2014
  
  bb70341a
- Eliminated some unnecessary memory allocation · 83a0b613
  peastman authored Oct 07, 2014
  
  83a0b613
06 Oct, 2014 2 commits
- More optimizations to CPU CustomGBForce · 4d827cd9
  peastman authored Oct 06, 2014
  
  4d827cd9
- Began creating CPU version of CustomGBForce · 468a8a5c
  peastman authored Oct 06, 2014
  
  468a8a5c
30 Sep, 2014 1 commit
- Fixed uninitialized memory error · ce5559f2
  peastman authored Sep 30, 2014
  
  ce5559f2
10 Sep, 2014 1 commit
- Prevent nan in CPU platform when two excluded particles are exactly on top of each other · 4c19a401
  peastman authored Sep 10, 2014
  
  4c19a401
03 Sep, 2014 2 commits
- Fixed a potential segfault · aa970221
  peastman authored Sep 03, 2014
  
  aa970221
- Fixed errors on Windows · c66766a8
  peastman authored Sep 03, 2014
  
  c66766a8
29 Aug, 2014 1 commit
- CustomManyParticleForce offers two different "permutation modes". Implemented... · f5acdd7a
  peastman authored Aug 28, 2014
```
CustomManyParticleForce offers two different "permutation modes".  Implemented it for Reference and CPU platforms.
```
  f5acdd7a
15 Aug, 2014 2 commits
- Eliminated some unnecessary memory allocation in CpuCustomManyParticleForce · 0d5e0b55
  peastman authored Aug 15, 2014
  
  0d5e0b55
- Finished CPU implementation of CustomManyParticleForce · 14d3c584
  peastman authored Aug 15, 2014
  
  14d3c584
14 Aug, 2014 2 commits
- Began vectorizing CustomManyParticleForce · be0d5cbe
  peastman authored Aug 14, 2014
  
  be0d5cbe
- CPU version of CustomManyParticleForce is multithreaded · 0e2ffb4b
  peastman authored Aug 14, 2014
  
  0e2ffb4b
13 Aug, 2014 1 commit
- Continuing to implement CPU version of CustomManyParticleForce · 1bc8e327
  peastman authored Aug 13, 2014
  
  1bc8e327
09 Aug, 2014 1 commit
- Began working on CPU implementation of CustomManyParticleForce · b2ce1c29
  peastman authored Aug 08, 2014
  
  b2ce1c29
28 Jul, 2014 1 commit
- Bug fixes to PNaCl vectors · 7c54418c
  peastman authored Jul 28, 2014
  
  7c54418c
25 Jul, 2014 1 commit
- CPU platform works on PNaCl · 0bb293f8
  peastman authored Jul 25, 2014
  
  0bb293f8
24 Jul, 2014 2 commits
- Fixed compilation error on Android · 86a8c924
  Peter Eastman authored Jul 24, 2014
  
  86a8c924
- Consolidated logic for determining if vector instructions are supported · 080691d3
  peastman authored Jul 24, 2014
  
  080691d3
14 May, 2014 1 commit
- Preliminary support for ARM/Android. · 454caac9
  peastman authored May 14, 2014
  
  454caac9
17 Mar, 2014 4 commits
- Bug fix · ee2d7229
  peastman authored Mar 17, 2014
  
  ee2d7229
- Finished parallelizing CPU implementation of CustomNonbondedForce · b8866444
  peastman authored Mar 17, 2014
  
  b8866444
- Began parallelizing CPU implementation of CustomNonbondedForce · c053a59a
  peastman authored Mar 17, 2014
  
  c053a59a
- Began creating CPU implementation of CustomNonbondedForce · 7ab954bb
  peastman authored Mar 17, 2014
  
  7ab954bb
11 Mar, 2014 1 commit
- Created a property for setting the number of CPU cores to use · 424bfe9c
  peastman authored Mar 11, 2014
  
  424bfe9c
28 Feb, 2014 1 commit
- fix bug · 05423d24
  Robert McGibbon authored Feb 28, 2014
  
  05423d24
10 Feb, 2014 1 commit
- Fixed an intermittent segfault · e49231b4
  peastman authored Feb 10, 2014
  
  e49231b4
27 Jan, 2014 1 commit
- CPU, CUDA, and OpenCL platforms can now be built statically · 8285d658
  Yutong Zhao authored Jan 27, 2014
  
  8285d658
22 Jan, 2014 2 commits
- Parallelized the initialization of positions and forces in the CPU platform · 146b66bd
  peastman authored Jan 22, 2014
  
  146b66bd
- Parallelized the computation of torsions with CPU platform · 543d51d7
  peastman authored Jan 22, 2014
  
  543d51d7
09 Jan, 2014 1 commit
- Optimizations to CPU GBSA · cf52e69f
  peastman authored Jan 08, 2014
  
  cf52e69f
08 Jan, 2014 1 commit
- Fixed lots of compilation errors on Windows · 72e81e04
  Peter Eastman authored Jan 08, 2014
  
  72e81e04
06 Jan, 2014 1 commit
- Fixed some bugs identified by Valgrind · fc1d0b5c
  peastman authored Jan 06, 2014
  
  fc1d0b5c
21 Dec, 2013 1 commit
- Parallelized summing the forces from different threads · 8bdf0829
  peastman authored Dec 20, 2013
  
  8bdf0829
19 Dec, 2013 3 commits
- Parallelized LangevinIntegrator for CPU platform · ddf1216d
  peastman authored Dec 19, 2013
  
  ddf1216d
- Fixed bug in detecting if AVX is supported · 6cde1860
  peastman authored Dec 19, 2013
  
  6cde1860
- Automatically select whether to use the SSE or AVX version of CpuNonbondedForce · d4af8747
  peastman authored Dec 18, 2013
  
  d4af8747
18 Dec, 2013 1 commit
- Improved vectorization of CpuNonbondedForce · 5cd23acb
  peastman authored Dec 18, 2013
  
  5cd23acb
17 Dec, 2013 1 commit
- Created AVX implementation of CPU nonbonded force · e22808f3
  peastman authored Dec 16, 2013
  
  e22808f3