GitLab

Mods to get Free energy plugin libs to compile on Windows; still problem w/ kCalculateLocalSoftcoreForces.cu
and hence OpenMMFreeEnergyCuda lib

Redesigned CustomNonbondedForce to eliminate combining rules and allow the expression to directly use parameters for individual particles.

replaced w/ the "KISS" (Keep It Simple Stupid) random number generator implemented in rng.h & rng.cpp

Free energy plugin added
Plugin will not run w/ Obc or GB/VI forces unless line 2004 of gpu.cpp (gpu->sim.totalNonbondOutputBuffers  = 2*gpu->sim.nonbondOutputBuffers;) is commented in -- working on removing this constraint
Also unit tests for GB/VI currently fail 

Lots of new optimizations in ParsedExpression.optimize().  Also optimized CUDA evaluation of expressions.

All energies existing in Preview Release 3 now run on the GPU, new Ewald energy terms still use Reference implementation

Created a CudaPlatform property for specifying whether CUDA should sync or spin loop while waiting for results