Commits · 222b3bb4026b3f24c2e170e828e61c81503364c0 · tsoc / openmm

29 Jul, 2016 1 commit
- Added documentation on parameter derivatives · 68f1f485
  Peter Eastman authored Jul 29, 2016
  
  68f1f485
28 Jun, 2016 1 commit
- Added units classes to Python API docs · 3b256326
  peastman authored Jun 28, 2016
  
  3b256326
21 Apr, 2016 1 commit
- Updated documentation for unified property names · 4966bdff
  Peter Eastman authored Apr 21, 2016
  
  4966bdff
07 Apr, 2016 1 commit
- Added documentation on patches · 238a1068
  peastman authored Apr 07, 2016
  
  238a1068
29 Mar, 2016 1 commit
- Added property to request deterministic forces · cddeb60f
  Peter Eastman authored Mar 28, 2016
  
  cddeb60f
25 Mar, 2016 1 commit
- Minor updates to manuals · a45599d2
  peastman authored Mar 25, 2016
  
  a45599d2
11 Mar, 2016 1 commit
- Can build manuals on Windows · e179cadd
  peastman authored Mar 11, 2016
  
  e179cadd
06 Feb, 2016 1 commit
- Fix errors in sphinx formatting for docs · 4f629c8f
  John Chodera (MSKCC) authored Feb 05, 2016
  
  4f629c8f
27 Jan, 2016 1 commit

Added further specificity that State files can be exchanged between · 8f9f0939

Nate Stanley authored Jan 27, 2016

different platforms and OpenMM versions, while Checkpoint files can not
be exchanged between platforms or versions of Openmm.

8f9f0939

21 Jan, 2016 4 commits
- Fixed supported OS X version number · aafe10bc
  peastman authored Jan 21, 2016
  
  aafe10bc
- Minor improvements to manual · 6a4213d8
  peastman authored Jan 21, 2016
  
  6a4213d8
- Add a method for retrieving list of matching templates to ForceField. · 15d1b5fc
  jchodera authored Jan 21, 2016
  
  15d1b5fc
- Updated documentation on installing to discuss conda · 1561f089
  peastman authored Jan 20, 2016
  
  1561f089
20 Jan, 2016 1 commit
- Fix docstrings, docs, and method names. · a4481f54
  John Chodera (MSKCC) authored Jan 20, 2016
  
  a4481f54
19 Jan, 2016 1 commit
- Also return residue templates; add docs. · 818db2b2
  jchodera authored Jan 19, 2016
  
  818db2b2
14 Jan, 2016 1 commit
- Added extrapolated polarization support to Python and to manual · 49cbc791
  Peter Eastman authored Jan 14, 2016
  
  49cbc791
09 Jan, 2016 2 commits
- Fix syntax errors in user guide docs. · 427f8517
  John Chodera (MSKCC) authored Jan 08, 2016
  
  427f8517
- Document how to turn on API docs building. · bb8e2129
  John Chodera (MSKCC) authored Jan 08, 2016
  
  bb8e2129
03 Jan, 2016 1 commit
- Added documentation of residue template generator with admonition that feature... · 01016dea
  John Chodera (MSKCC) authored Jan 02, 2016
```
Added documentation of residue template generator with admonition that feature is experimental and API is subject to change.
```
  01016dea
15 Dec, 2015 1 commit
- Fix description of state on front page · 84884d29
  Robert McGibbon authored Dec 14, 2015
  
  84884d29
14 Dec, 2015 8 commits
- Add __future__ import for legacy python · ec694ba8
  Robert McGibbon authored Dec 14, 2015
  
  ec694ba8
- Remove subdirectory gitignore · 7b567917
  Robert McGibbon authored Dec 14, 2015
  
  7b567917
- Add some spacing · c6e1397e
  Robert McGibbon authored Dec 14, 2015
  
  c6e1397e
- Add instructions to build documentation · c4d95a4d
  Robert McGibbon authored Dec 14, 2015
  
  c4d95a4d
- other doxyfile · ad561fb7
  Robert T. McGibbon authored Dec 13, 2015
  
  ad561fb7
- Remove superfluous stuff from doxyfile · ac85f36a
  Robert T. McGibbon authored Dec 13, 2015
  
  ac85f36a
- Add toc · cfc0c568
  Robert T. McGibbon authored Dec 13, 2015
  
  cfc0c568
- Move things onto one page · c64a84ec
  Robert T. McGibbon authored Dec 13, 2015
  
  c64a84ec
13 Dec, 2015 2 commits
- Some assorted fixes · 293f76e5
  Robert T. McGibbon authored Dec 12, 2015
  
  293f76e5
- Add narative to forces · 60352b13
  Robert T. McGibbon authored Dec 12, 2015
  
  60352b13
04 Dec, 2015 3 commits
- platform · 8cd5bed3
  Robert T. McGibbon authored Dec 03, 2015
  
  8cd5bed3
- Small fixes · 9fb3f334
  Robert T. McGibbon authored Dec 03, 2015
  
  9fb3f334
- Sphinx C++ documentation · 84017c97
  Robert T. McGibbon authored Dec 03, 2015
  
  84017c97
03 Dec, 2015 1 commit
- Add _template path · db0e4218
  Robert T. McGibbon authored Dec 03, 2015
  
  db0e4218
21 Nov, 2015 1 commit
- Updated the user guide to clarify how to save simulations results · 4fd6934b
  Nate Stanley authored Nov 20, 2015
```
and progress. Also added a small note about the determinism of
simulations on different platforms.
```
  4fd6934b
17 Nov, 2015 1 commit
- Update conf.py · 9d38051e
  Robert T. McGibbon authored Nov 17, 2015
  
  9d38051e
16 Nov, 2015 1 commit
- Minor updates to documentation · 7139275a
  Peter Eastman authored Nov 16, 2015
  
  7139275a
15 Nov, 2015 1 commit
- Add new search extension · 9af3e56b
  Robert McGibbon authored Nov 14, 2015
  
  9af3e56b
11 Nov, 2015 1 commit
- Residue templates can specify atoms by name instead of index · 6391f721
  Peter Eastman authored Nov 11, 2015
  
  6391f721
05 Nov, 2015 1 commit
- Added documentation on CompoundIntegrator · 1a3411a5
  Peter Eastman authored Nov 04, 2015
  
  1a3411a5