Commits · 1c2c1700db1a81bb7ceb24079cbfd9133e941b6d · tsoc / openmm

12 Jun, 2015 1 commit
- Updates to documentation for 6.3 · 1c2c1700
  peastman authored Jun 11, 2015
  
  1c2c1700
19 May, 2015 1 commit
- Moved the MTS and aMD integrators into the main repository · 6dd0c6f1
  peastman authored May 19, 2015
  
  6dd0c6f1
06 May, 2015 2 commits
- Fixed failing test cases. Increased default minimizer tolerance to 10. · f18fa49c
  Peter Eastman authored May 06, 2015
  
  f18fa49c
- Implemented select() in custom expressions · 2b7bbdb0
  peastman authored May 06, 2015
  
  2b7bbdb0
04 May, 2015 1 commit
- Updated documentation for addSolvent() · 05dd85de
  peastman authored May 04, 2015
  
  05dd85de
13 Feb, 2015 1 commit
- Custom expressions support floor() and ceil(). · dce6a437
  peastman authored Feb 13, 2015
  
  dce6a437
10 Feb, 2015 1 commit
- More support for triclinic boxes · 30a53702
  Peter Eastman authored Feb 10, 2015
  
  30a53702
15 Jan, 2015 4 commits
- Tweak numbering formatting. · df99352d
  Jason Swails authored Jan 15, 2015
  
  df99352d
- :class: -> :meth: where appropriate. · 8a2e438e
  Jason Swails authored Jan 15, 2015
  
  8a2e438e
- ``XXX`` -> :class:`XXX` · c2505aad
  Jason Swails authored Jan 15, 2015
```
principle -> principal... I'm a bozo.
```
  c2505aad
- Add a section at the end of the manual about stochastic forces, integrators, and · c2191b61
  Jason Swails authored Jan 15, 2015
```
random numbers.  Add 2 citations about Langevin synchronization.  Convert the
references.bib file to UNIX line endings.
```
  c2191b61
02 Dec, 2014 1 commit
- Updated API and documentation to permit triclinic boxes · fa283744
  peastman authored Dec 01, 2014
  
  fa283744
19 Nov, 2014 1 commit
- Updated instructions on running the test installation script · b7730b84
  peastman authored Nov 19, 2014
  
  b7730b84
14 Nov, 2014 1 commit
- Further documentation updates for 6.2 · a572eec6
  peastman authored Nov 13, 2014
  
  a572eec6
30 Oct, 2014 1 commit
- Minor updates to manual for 6.2. · da2e8c92
  peastman authored Oct 30, 2014
  
  da2e8c92
13 Oct, 2014 1 commit
- GBSAOBCForce allows the surface area energy to be changed · 34a604b8
  peastman authored Oct 13, 2014
  
  34a604b8
06 Oct, 2014 1 commit
- More documentation on MonteCarloMembraneBarostat · 79929693
  peastman authored Oct 06, 2014
  
  79929693
04 Oct, 2014 1 commit
- Added MonteCarloMembraneBarostat to the manual · 77c40022
  peastman authored Oct 03, 2014
  
  77c40022
03 Sep, 2014 1 commit
- Added documentation for CustomManyParticleForce · 1a699100
  peastman authored Sep 03, 2014
  
  1a699100
18 Aug, 2014 1 commit
- Docs start chapter on any page · 3cc5e853
  Robert McGibbon authored Aug 18, 2014
  
  3cc5e853
11 Aug, 2014 3 commits
- Marked GBVIForce as deprecated and removed it from the manual · 37246338
  peastman authored Aug 11, 2014
  
  37246338
- Prevent sphinx from adding an index to PDF file · 75a64c25
  peastman authored Aug 11, 2014
  
  75a64c25
- AMBER example script uses periodic box vectors from inpcrd · 89179942
  peastman authored Aug 11, 2014
  
  89179942
08 Aug, 2014 1 commit
- Edits to documentation based on Jason's comments · de112a82
  peastman authored Aug 08, 2014
  
  de112a82
06 Aug, 2014 1 commit
- Added discussion of loading CHARMM files · 7219ca90
  peastman authored Aug 06, 2014
  
  7219ca90
04 Aug, 2014 2 commits
- Jason's fixes to documentation · d688fca9
  peastman authored Aug 04, 2014
  
  d688fca9
- John's fixes to documentation · 4995e754
  peastman authored Aug 04, 2014
  
  4995e754
31 Jul, 2014 1 commit
- Fixed lots of errors in User Guide, especially in equations · 1f54f70c
  peastman authored Jul 31, 2014
  
  1f54f70c
30 Jul, 2014 1 commit
- Fixes to user guide · 4fccce3e
  peastman authored Jul 30, 2014
  
  4fccce3e
22 Jul, 2014 1 commit
- Renamed docs to docs-source · 088b4910
  peastman authored Jul 22, 2014
  
  088b4910