Commits · 084f034b0628babe6332423481a648552de00290 · tsoc / openmm

27 Nov, 2012 1 commit
- Fixed errors in AMD implementation of GB · 0df0e673
  Peter Eastman authored Nov 27, 2012
  
  0df0e673
22 Nov, 2012 1 commit
- Avoid errors in updateParametersInContext() when a force contains no bonds. · 6a14b5b1
  Peter Eastman authored Nov 22, 2012
  
  6a14b5b1
16 Nov, 2012 1 commit
- Fixed failing test cases · 549d62bd
  Peter Eastman authored Nov 16, 2012
  
  549d62bd
15 Nov, 2012 1 commit
- Reverted to April revision - added in #if to resolve MSVC nativeKernel error. · b8b2e1ef
  Yutong Zhao authored Nov 15, 2012
  
  b8b2e1ef
05 Nov, 2012 1 commit
- Fixed compilation errors on Windows · 99bca8c1
  Peter Eastman authored Nov 05, 2012
  
  99bca8c1
01 Nov, 2012 1 commit
- Fixed lots of bugs found by mixed/double precision test cases · 490cc912
  Peter Eastman authored Nov 01, 2012
  
  490cc912
31 Oct, 2012 1 commit
- OpenCL and CUDA tests are run three times, once for each precision model · 3c8adf0c
  Peter Eastman authored Oct 31, 2012
  
  3c8adf0c
30 Oct, 2012 3 commits
- Added Context::applyVelocityConstraints() and Context::setVelocitiesToTemperature() · 8cc22e17
  Peter Eastman authored Oct 30, 2012
  
  8cc22e17
- Patched in #ifdef to fix __cdecl and __stdcall FncPtr incompatibilities. · 15387c32
  Yutong Zhao authored Oct 30, 2012
  
  15387c32
- Fixed bug where MonteCarloBarostat would cause molecules to be reordered (see bug 1753) · bcd378a5
  Peter Eastman authored Oct 30, 2012
  
  bcd378a5
26 Oct, 2012 1 commit
- Bug fixes · 61bb8786
  Peter Eastman authored Oct 26, 2012
  
  61bb8786
25 Oct, 2012 1 commit
- Kinetic energy is computed by the Integrator so it can adjust for leapfrog displacements · 925b00ec
  Peter Eastman authored Oct 25, 2012
  
  925b00ec
24 Oct, 2012 2 commits
- Throw an exception if the user requests double precision on a device that doesn't support it. · d0432e70
  Peter Eastman authored Oct 24, 2012
  
  d0432e70
- Minor fixes and cleanup · e479d792
  Peter Eastman authored Oct 24, 2012
  
  e479d792
23 Oct, 2012 2 commits
- Fixed compilation error · 772a6850
  Peter Eastman authored Oct 23, 2012
  
  772a6850
- Updated to newer version of OpenCL C++ bindings · 5fb78b59
  Peter Eastman authored Oct 23, 2012
  
  5fb78b59
19 Oct, 2012 1 commit
- The test for identical exceptions between nonbonded forces is order insensitive · ff7f1035
  Peter Eastman authored Oct 19, 2012
  
  ff7f1035
18 Oct, 2012 1 commit
- Assorted cleanup and bug fixes · 1de2e2a0
  Peter Eastman authored Oct 18, 2012
  
  1de2e2a0
17 Oct, 2012 2 commits
- Finished implementing double precision for OpenCL · 59f8cf87
  Peter Eastman authored Oct 17, 2012
  
  59f8cf87
- Continuing to implement double precision in OpenCL · c8dac206
  Peter Eastman authored Oct 17, 2012
  
  c8dac206
16 Oct, 2012 2 commits
- Bug fix · 34938e2c
  Peter Eastman authored Oct 16, 2012
  
  34938e2c
- Beginnings of mixed/double precision support in OpenCL · 8d6a2a01
  Peter Eastman authored Oct 16, 2012
  
  8d6a2a01
12 Oct, 2012 2 commits
- Fixed compilation errors and warnings on Windows · 9fd73edf
  Peter Eastman authored Oct 12, 2012
  
  9fd73edf
- Flush the queue after each time step on Windows to reduce UI lag. · 65c389ff
  Peter Eastman authored Oct 12, 2012
  
  65c389ff
10 Oct, 2012 1 commit

OpenCLArray is no longer templatized and doesn't provide a host buffer. This... · 1107aa83

Peter Eastman authored Oct 10, 2012

OpenCLArray is no longer templatized and doesn't provide a host buffer.  This is in preparation for adding mixed/double precision support.

1107aa83

27 Sep, 2012 1 commit
- Fixed test cases that used a Context without setting positions · 01269257
  Peter Eastman authored Sep 27, 2012
  
  01269257
07 Sep, 2012 1 commit
- fixed sigmaEpsilon padding errors. Gets rid of computeNonbonded cuda-memcheck errors · 9fffe6da
  Yutong Zhao authored Sep 07, 2012
  
  9fffe6da
28 Aug, 2012 1 commit
- Fixed errors on Intel OpenCL · b8e15090
  Peter Eastman authored Aug 28, 2012
  
  b8e15090
27 Jun, 2012 1 commit
- Minor cleanup and bug fixes · 0a850783
  Peter Eastman authored Jun 27, 2012
  
  0a850783
23 Jun, 2012 1 commit
- Fixed errors under Intel OpenCL · f0454a4b
  Peter Eastman authored Jun 23, 2012
  
  f0454a4b
15 Jun, 2012 1 commit
- Fixed compilation errors on Windows · 70ba177d
  Peter Eastman authored Jun 15, 2012
  
  70ba177d
11 Jun, 2012 2 commits
- NonbondedForce::updateParametersInContext() is more tolerant about what... · 72d6b6a9
  Peter Eastman authored Jun 11, 2012
```
NonbondedForce::updateParametersInContext() is more tolerant about what changes to exceptions it allows
```
  72d6b6a9
- Fixed error when multiple CustomCompoundBondForces are added to a system · e09b1088
  Peter Eastman authored Jun 11, 2012
  
  e09b1088
07 Jun, 2012 1 commit
- Implemented updateParametersInContext() for five more Force classes · 99cebd08
  Peter Eastman authored Jun 07, 2012
  
  99cebd08
06 Jun, 2012 3 commits
- Implemented updateParametersInContext() for seven more Force classes · 4bc723ab
  Peter Eastman authored Jun 06, 2012
  
  4bc723ab
- Implemented updateParametersInContext() for GBSAOBCForce · b5e2a951
  Peter Eastman authored Jun 06, 2012
  
  b5e2a951
- Minor cleanup · c2dfdb5f
  Peter Eastman authored Jun 06, 2012
  
  c2dfdb5f
04 Jun, 2012 1 commit
- Fixed various bugs that caused energy to come out wrong after per-particle parameters were changed · 18501459
  Peter Eastman authored Jun 04, 2012
  
  18501459
01 Jun, 2012 2 commits
- Moved Hilbert curve code into libraries directory · 233c6a70
  Peter Eastman authored Jun 01, 2012
  
  233c6a70
- Renamed a test case · 5d7c2d18
  Peter Eastman authored Jun 01, 2012
  
  5d7c2d18