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tsoc
openmm
Commits
ebe757dd
Commit
ebe757dd
authored
Jul 30, 2015
by
peastman
Browse files
When calling addHydrogens() without a ForceField, improve positioning of hydrogens
parent
b32e5832
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wrappers/python/simtk/openmm/app/modeller.py
wrappers/python/simtk/openmm/app/modeller.py
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wrappers/python/simtk/openmm/app/modeller.py
View file @
ebe757dd
...
...
@@ -813,7 +813,7 @@ class Modeller(object):
# and causes hydrogens to spread out evenly.
system
=
System
()
nonbonded
=
CustomNonbondedForce
(
'1/((r/0.1)^4+1)'
)
nonbonded
=
CustomNonbondedForce
(
'1
00
/((r/0.1)^4+1)'
)
bonds
=
HarmonicBondForce
()
angles
=
HarmonicAngleForce
()
system
.
addForce
(
nonbonded
)
...
...
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