Commit b90e80ff authored by Mark Friedrichs's avatar Mark Friedrichs
Browse files

Renamed OpenMMAmoeba,h to AmoebaOpenMM for consistency w/ other plugin

parent 8928a337
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define AMOEBA_OPENMM_H_ #define AMOEBA_OPENMM_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_ANGLE_FORCE_H_ #define OPENMM_AMOEBA_HARMONIC_ANGLE_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_BOND_FORCE_H_ #define OPENMM_AMOEBA_HARMONIC_BOND_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
...@@ -38,7 +38,6 @@ ...@@ -38,7 +38,6 @@
#include <vector> #include <vector>
#include "openmm/internal/windowsExport.h" #include "openmm/internal/windowsExport.h"
//namespace AmoebaOpenMM {
namespace OpenMM { namespace OpenMM {
/** /**
...@@ -157,6 +156,6 @@ public: ...@@ -157,6 +156,6 @@ public:
} }
}; };
} // namespace AmoebaOpenMM } // namespace OpenMM
#endif /*OPENMM_AMOEBA_HARMONIC_BOND_FORCE_H_*/ #endif /*OPENMM_AMOEBA_HARMONIC_BOND_FORCE_H_*/
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_IN_PLANE_ANGLE_FORCE_H_ #define OPENMM_AMOEBA_HARMONIC_IN_PLANE_ANGLE_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_MULTIPOLE_FORCE_H_ #define OPENMM_AMOEBA_MULTIPOLE_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_OUT_OF_PLANE_BEND_FORCE_H_ #define OPENMM_AMOEBA_OUT_OF_PLANE_BEND_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_PI_TORSION_FORCE_H_ #define OPENMM_AMOEBA_PI_TORSION_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_STRETCH_BEND_FORCE_H_ #define OPENMM_AMOEBA_STRETCH_BEND_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_TORSION_FORCE_H_ #define OPENMM_AMOEBA_TORSION_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_TORSION_TORSION_FORCE_H_ #define OPENMM_AMOEBA_TORSION_TORSION_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_UREY_BRADLEY_FORCE_H_ #define OPENMM_AMOEBA_UREY_BRADLEY_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
...@@ -156,6 +156,6 @@ public: ...@@ -156,6 +156,6 @@ public:
} }
}; };
} // namespace AmoebaOpenMM } // namespace OpenMM
#endif /*OPENMM_AMOEBA_UREY_BRADLEY_FORCE_H_*/ #endif /*OPENMM_AMOEBA_UREY_BRADLEY_FORCE_H_*/
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_VDW_FORCE_H_ #define OPENMM_AMOEBA_VDW_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_WCA_DISPERSION_FORCE_H_ #define OPENMM_AMOEBA_WCA_DISPERSION_FORCE_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define AMOEBA_OPENMM_KERNELS_H_ #define AMOEBA_OPENMM_KERNELS_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
...@@ -32,7 +32,7 @@ ...@@ -32,7 +32,7 @@
* USE OR OTHER DEALINGS IN THE SOFTWARE. * * USE OR OTHER DEALINGS IN THE SOFTWARE. *
* -------------------------------------------------------------------------- */ * -------------------------------------------------------------------------- */
#include "AmoebaOpenMM.h" #include "OpenMMAmoeba.h"
#include "openmm/KernelImpl.h" #include "openmm/KernelImpl.h"
#include "openmm/System.h" #include "openmm/System.h"
#include "openmm/Platform.h" #include "openmm/Platform.h"
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_ANGLE_FORCE_IMPL_H_ #define OPENMM_AMOEBA_HARMONIC_ANGLE_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_BOND_FORCE_IMPL_H_ #define OPENMM_AMOEBA_HARMONIC_BOND_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_HARMONIC_IN_PLANE_ANGLE_FORCE_IMPL_H_ #define OPENMM_AMOEBA_HARMONIC_IN_PLANE_ANGLE_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_MULTIPOLE_FORCE_IMPL_H_ #define OPENMM_AMOEBA_MULTIPOLE_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_OUT_OF_PLANE_BEND_FORCE_IMPL_H_ #define OPENMM_AMOEBA_OUT_OF_PLANE_BEND_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
#define OPENMM_AMOEBA_PI_TORSION_FORCE_IMPL_H_ #define OPENMM_AMOEBA_PI_TORSION_FORCE_IMPL_H_
/* -------------------------------------------------------------------------- * /* -------------------------------------------------------------------------- *
* AmoebaOpenMM * * OpenMMAmoeba *
* -------------------------------------------------------------------------- * * -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from * * This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of * * Simbios, the NIH National Center for Physics-Based Simulation of *
......
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