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tsoc
openmm
Commits
74ef3fee
Commit
74ef3fee
authored
Aug 06, 2019
by
Jeff Wagner
Browse files
set SA energy to 0 if GBSAOBCForce is made w SA=None
parent
bf7aee53
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wrappers/python/simtk/openmm/app/internal/amber_file_parser.py
...ers/python/simtk/openmm/app/internal/amber_file_parser.py
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wrappers/python/simtk/openmm/app/internal/amber_file_parser.py
View file @
74ef3fee
...
@@ -989,6 +989,8 @@ def readAmberSystem(topology, prmtop_filename=None, prmtop_loader=None, shake=No
...
@@ -989,6 +989,8 @@ def readAmberSystem(topology, prmtop_filename=None, prmtop_loader=None, shake=No
gb
=
mm
.
GBSAOBCForce
()
gb
=
mm
.
GBSAOBCForce
()
gb
.
setSoluteDielectric
(
soluteDielectric
)
gb
.
setSoluteDielectric
(
soluteDielectric
)
gb
.
setSolventDielectric
(
solventDielectric
)
gb
.
setSolventDielectric
(
solventDielectric
)
if
gbsaModel
is
None
:
gb
.
setSurfaceAreaEnergy
(
0
)
elif
gbmodel
==
'GBn'
:
elif
gbmodel
==
'GBn'
:
gb
=
customgb
.
GBSAGBnForce
(
solventDielectric
,
soluteDielectric
,
gbsaModel
,
cutoff
,
implicitSolventKappa
)
gb
=
customgb
.
GBSAGBnForce
(
solventDielectric
,
soluteDielectric
,
gbsaModel
,
cutoff
,
implicitSolventKappa
)
elif
gbmodel
==
'GBn2'
:
elif
gbmodel
==
'GBn2'
:
...
...
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