Merge pull request #2460 from peastman/doxygen

Fixed errors with Doxygen 1.8.16

plugins/amoeba/wrappers/Doxyfile.in

@@ -581,7 +581,7 @@ INPUT_ENCODING         = UTF-8
 # *.c *.cc *.cxx *.cpp *.c++ *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh *.hxx 
 # *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.py *.f90
 
-FILE_PATTERNS          = 
+FILE_PATTERNS          = *.h
 
 # The RECURSIVE tag can be used to turn specify whether or not subdirectories 
 # should be searched for input files as well. Possible values are YES and NO. 

wrappers/Doxyfile.in

@@ -582,7 +582,7 @@ INPUT_ENCODING         = UTF-8
 # *.c *.cc *.cxx *.cpp *.c++ *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh *.hxx 
 # *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.py *.f90
 
-FILE_PATTERNS          = 
+FILE_PATTERNS          = *.h
 
 # The RECURSIVE tag can be used to turn specify whether or not subdirectories 
 # should be searched for input files as well. Possible values are YES and NO. 

wrappers/python/src/swig_doxygen/doxygen/Doxyfile.in

@@ -588,7 +588,7 @@ INPUT_ENCODING         = UTF-8
 # *.c *.cc *.cxx *.cpp *.c++ *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh *.hxx 
 # *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.py *.f90
 
-FILE_PATTERNS          = 
+FILE_PATTERNS          = *.h
 
 # The RECURSIVE tag can be used to turn specify whether or not subdirectories 
 # should be searched for input files as well. Possible values are YES and NO.