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tsoc
openmm
Commits
3d62421b
Unverified
Commit
3d62421b
authored
Jun 28, 2022
by
Peter Eastman
Committed by
GitHub
Jun 28, 2022
Browse files
Fixed freeze when using multiple GPUs (#3668)
parent
dd80fb3f
Changes
3
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3 changed files
with
12 additions
and
3 deletions
+12
-3
platforms/common/include/openmm/common/ComputeContext.h
platforms/common/include/openmm/common/ComputeContext.h
+5
-1
platforms/common/src/CommonKernels.cpp
platforms/common/src/CommonKernels.cpp
+2
-1
platforms/common/src/ComputeContext.cpp
platforms/common/src/ComputeContext.cpp
+5
-1
No files found.
platforms/common/include/openmm/common/ComputeContext.h
View file @
3d62421b
...
@@ -9,7 +9,7 @@
...
@@ -9,7 +9,7 @@
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* *
* *
* Portions copyright (c) 2019 Stanford University and the Authors.
*
* Portions copyright (c) 2019
-2022
Stanford University and the Authors. *
* Authors: Peter Eastman *
* Authors: Peter Eastman *
* Contributors: *
* Contributors: *
* *
* *
...
@@ -555,6 +555,10 @@ public:
...
@@ -555,6 +555,10 @@ public:
* Get whether the worker thread has exited.
* Get whether the worker thread has exited.
*/
*/
bool
isFinished
();
bool
isFinished
();
/**
* Get whether the thread invoking this method is the worker thread.
*/
bool
isCurrentThread
();
/**
/**
* Block until all tasks have finished executing and the worker thread is idle.
* Block until all tasks have finished executing and the worker thread is idle.
*/
*/
...
...
platforms/common/src/CommonKernels.cpp
View file @
3d62421b
...
@@ -1812,7 +1812,8 @@ public:
...
@@ -1812,7 +1812,8 @@ public:
double computeForceAndEnergy(bool includeForces, bool includeEnergy, int groups) {
double computeForceAndEnergy(bool includeForces, bool includeEnergy, int groups) {
if ((groups&(1<<force->getForceGroup())) == 0)
if ((groups&(1<<force->getForceGroup())) == 0)
return 0;
return 0;
cc
.
getWorkThread
().
flush
();
if (!cc.getWorkThread().isCurrentThread())
cc.getWorkThread().flush();
Vec3 a, b, c;
Vec3 a, b, c;
cc.getPeriodicBoxVectors(a, b, c);
cc.getPeriodicBoxVectors(a, b, c);
double volume = a[0]*b[1]*c[2];
double volume = a[0]*b[1]*c[2];
...
...
platforms/common/src/ComputeContext.cpp
View file @
3d62421b
...
@@ -6,7 +6,7 @@
...
@@ -6,7 +6,7 @@
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* *
* *
* Portions copyright (c) 2019-202
1
Stanford University and the Authors. *
* Portions copyright (c) 2019-202
2
Stanford University and the Authors. *
* Authors: Peter Eastman *
* Authors: Peter Eastman *
* Contributors: *
* Contributors: *
* *
* *
...
@@ -716,6 +716,10 @@ bool ComputeContext::WorkThread::isFinished() {
...
@@ -716,6 +716,10 @@ bool ComputeContext::WorkThread::isFinished() {
return
finished
;
return
finished
;
}
}
bool
ComputeContext
::
WorkThread
::
isCurrentThread
()
{
return
(
pthread_self
()
==
thread
);
}
void
ComputeContext
::
WorkThread
::
flush
()
{
void
ComputeContext
::
WorkThread
::
flush
()
{
pthread_mutex_lock
(
&
queueLock
);
pthread_mutex_lock
(
&
queueLock
);
while
(
!
waiting
)
while
(
!
waiting
)
...
...
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