Common implementation of NonbondedForce (#4922)

* Use common API for kernels * More code uses common interface * Bug fixes * Unified interface for sorting * Simplified interface for FFT * Use common event API for synchronization * Minor changes to make code more consistent between platforms * Common implementation of NonbondedForce * Bug fixes * Flag to enable list of single pairs * CUDA and OpenCL use common implementation of NonbondedForce * Fixed compilation error * HIP uses common implementation of NonbondedForce

Common implementation of NonbondedForce (#4922)
* Use common API for kernels * More code uses common interface * Bug fixes * Unified interface for sorting * Simplified interface for FFT * Use common event API for synchronization * Minor changes to make code more consistent between platforms * Common implementation of NonbondedForce * Bug fixes * Flag to enable list of single pairs * CUDA and OpenCL use common implementation of NonbondedForce * Fixed compilation error * HIP uses common implementation of NonbondedForce
2443dcee · Peter Eastman · GitHub · dfb8d755 · 2443dcee · 2443dcee
Unverified Commit 2443dcee authored May 05, 2025 by Peter Eastman Committed by GitHub May 05, 2025
11 changed files
--- a/platforms/opencl/src/OpenCLNonbondedUtilities.cpp
+++ b/platforms/opencl/src/OpenCLNonbondedUtilities.cpp
--- a/platforms/opencl/src/OpenCLSort.cpp
+++ b/platforms/opencl/src/OpenCLSort.cpp
--- a/platforms/opencl/tests/TestOpenCLSort.cpp
+++ b/platforms/opencl/tests/TestOpenCLSort.cpp
--- a/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.cpp
+++ b/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.cpp
--- a/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.h
+++ b/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.h
--- a/plugins/amoeba/platforms/cuda/src/AmoebaCudaKernels.cpp
+++ b/plugins/amoeba/platforms/cuda/src/AmoebaCudaKernels.cpp
--- a/plugins/amoeba/platforms/cuda/src/AmoebaCudaKernels.h
+++ b/plugins/amoeba/platforms/cuda/src/AmoebaCudaKernels.h
--- a/plugins/amoeba/platforms/hip/src/AmoebaHipKernels.cpp
+++ b/plugins/amoeba/platforms/hip/src/AmoebaHipKernels.cpp
--- a/plugins/amoeba/platforms/hip/src/AmoebaHipKernels.h
+++ b/plugins/amoeba/platforms/hip/src/AmoebaHipKernels.h
--- a/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.cpp
+++ b/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.cpp
--- a/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.h
+++ b/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.h