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Commit 1975b62f authored by Robert McGibbon's avatar Robert McGibbon
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Merge branch 'pdbbug'

parents a5e0c8e7 4ab13768
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wrappers/python/simtk/openmm/app/pdbfile.py
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...@@ -287,11 +287,11 @@ class PDBFile(object): ...@@ -287,11 +287,11 @@ class PDBFile(object):
else: else:
atomName = atom.name atomName = atom.name
coords = positions[posIndex] coords = positions[posIndex]
line = "ATOM %5d %-4s %3s %s%4d %s%s%s 1.00 0.00" % ( line = "ATOM %5d %-4s %3s %s%4d %s%s%s 1.00 0.00 %-2s " % (
atomIndex%100000, atomName, resName, chainName, atomIndex%100000, atomName, resName, chainName,
(resIndex+1)%10000, _format_83(coords[0]), (resIndex+1)%10000, _format_83(coords[0]),
_format_83(coords[1]), _format_83(coords[2])) _format_83(coords[1]), _format_83(coords[2]), atom.element.symbol)
assert len(line) == 66, 'Fixed width overflow detected' assert len(line) == 80, 'Fixed width overflow detected'
print >>file, line print >>file, line
posIndex += 1 posIndex += 1
atomIndex += 1 atomIndex += 1
......
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