Merge remote-tracking branch 'upstream/master'

047934e2 · Rafal P. Wiewiora · ce3a5dc0 · d12c9bd1 · 047934e2 · 047934e2
Commit 047934e2 authored Mar 01, 2017 by Rafal P. Wiewiora
20 changed files
--- a/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceForce.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceForce.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp