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tsoc
openmm
Commits
030ef272
"platforms/reference/src/ReferenceTabulatedFunction.cpp" did not exist on "0e879806cdd38e58b04481ecf7fcd93c44c7dc27"
Commit
030ef272
authored
Jan 13, 2010
by
Mark Friedrichs
Browse files
Remove unused methods
parent
074f6b36
Changes
2
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platforms/reference/src/gbsa/CpuObc.cpp
platforms/reference/src/gbsa/CpuObc.cpp
+0
-639
platforms/reference/src/gbsa/CpuObc.h
platforms/reference/src/gbsa/CpuObc.h
+0
-58
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platforms/reference/src/gbsa/CpuObc.cpp
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030ef272
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platforms/reference/src/gbsa/CpuObc.h
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030ef272
...
@@ -147,9 +147,6 @@ class CpuObc : public CpuImplicitSolvent {
...
@@ -147,9 +147,6 @@ class CpuObc : public CpuImplicitSolvent {
int
computeBornEnergyForces
(
RealOpenMM
*
bornRadii
,
RealOpenMM
**
atomCoordinates
,
int
computeBornEnergyForces
(
RealOpenMM
*
bornRadii
,
RealOpenMM
**
atomCoordinates
,
const
RealOpenMM
*
partialCharges
,
RealOpenMM
**
forces
);
const
RealOpenMM
*
partialCharges
,
RealOpenMM
**
forces
);
int
computeBornEnergyForcesPrint
(
RealOpenMM
*
bornRadii
,
RealOpenMM
**
atomCoordinates
,
const
RealOpenMM
*
partialCharges
,
RealOpenMM
**
forces
);
/**---------------------------------------------------------------------------------------
/**---------------------------------------------------------------------------------------
Get state
Get state
...
@@ -161,61 +158,6 @@ class CpuObc : public CpuImplicitSolvent {
...
@@ -161,61 +158,6 @@ class CpuObc : public CpuImplicitSolvent {
--------------------------------------------------------------------------------------- */
--------------------------------------------------------------------------------------- */
std
::
string
getStateString
(
const
char
*
title
)
const
;
std
::
string
getStateString
(
const
char
*
title
)
const
;
/**---------------------------------------------------------------------------------------
Write Born energy and forces (Simbios)
@param atomCoordinates atomic coordinates
@param partialCharges partial atom charges
@param forces force array
@param resultsFileName output file name
@return SimTKOpenMMCommon::DefaultReturn if file opened; else return SimTKOpenMMCommon::ErrorReturn
--------------------------------------------------------------------------------------- */
int
writeBornEnergyForces
(
RealOpenMM
**
atomCoordinates
,
const
RealOpenMM
*
partialCharges
,
RealOpenMM
**
forces
,
const
std
::
string
&
resultsFileName
)
const
;
/**---------------------------------------------------------------------------------------
Write results from first loop
@param atomCoordinates atomic coordinates
@param RealOpenMM forces forces
@param outputFileName output file name
@return SimTKOpenMMCommon::DefaultReturn unless
file cannot be opened
in which case return SimTKOpenMMCommon::ErrorReturn
--------------------------------------------------------------------------------------- */
static
int
writeForceLoop1
(
int
numberOfAtoms
,
RealOpenMM
**
forces
,
const
RealOpenMM
*
bornForce
,
const
std
::
string
&
outputFileName
);
/**---------------------------------------------------------------------------------------
Write results
@param numberOfAtoms number of atoms
@param chunkSizes vector of chunk sizes for realRealOpenMMVector
@param realRealOpenMMVector vector of RealOpenMM**
@param realVector vector of RealOpenMM*
@param outputFileName output file name
@return SimTKOpenMMCommon::DefaultReturn unless
file cannot be opened
in which case return SimTKOpenMMCommon::ErrorReturn
--------------------------------------------------------------------------------------- */
static
int
writeForceLoop
(
int
numberOfAtoms
,
const
IntVector
&
chunkSizes
,
const
RealOpenMMPtrPtrVector
&
realRealOpenMMVector
,
const
RealOpenMMPtrVector
&
realVector
,
const
std
::
string
&
outputFileName
);
};
};
...
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