HipPlatform.cpp 16.4 KB
Newer Older
1
2
3
4
5
6
7
8
/* -------------------------------------------------------------------------- *
 *                                   OpenMM                                   *
 * -------------------------------------------------------------------------- *
 * This is part of the OpenMM molecular simulation toolkit originating from   *
 * Simbios, the NIH National Center for Physics-Based Simulation of           *
 * Biological Structures at Stanford, funded under the NIH Roadmap for        *
 * Medical Research, grant U54 GM072970. See https://simtk.org.               *
 *                                                                            *
9
 * Portions copyright (c) 2008-2024 Stanford University and the Authors.      *
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
 * Portions copyright (c) 2020 Advanced Micro Devices, Inc.                   *
 * Authors: Peter Eastman, Nicholas Curtis                                    *
 * Contributors:                                                              *
 *                                                                            *
 * This program is free software: you can redistribute it and/or modify       *
 * it under the terms of the GNU Lesser General Public License as published   *
 * by the Free Software Foundation, either version 3 of the License, or       *
 * (at your option) any later version.                                        *
 *                                                                            *
 * This program is distributed in the hope that it will be useful,            *
 * but WITHOUT ANY WARRANTY; without even the implied warranty of             *
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the              *
 * GNU Lesser General Public License for more details.                        *
 *                                                                            *
 * You should have received a copy of the GNU Lesser General Public License   *
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.      *
 * -------------------------------------------------------------------------- */

#include "HipContext.h"
#include "HipExpressionUtilities.h"
#include "HipPlatform.h"
#include "HipKernelFactory.h"
#include "HipKernels.h"
#include "openmm/Context.h"
#include "openmm/System.h"
#include "openmm/internal/ContextImpl.h"
#include "openmm/internal/hardware.h"
#include <algorithm>
#include <cctype>
#include <sstream>
#include <cstdio>
#ifdef _MSC_VER
42
    #include <Windows.h>
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
#endif
using namespace OpenMM;
using namespace std;

#define CHECK_RESULT(result, prefix) \
    if (result != hipSuccess) { \
        std::stringstream m; \
        m<<prefix<<": "<<HipContext::getErrorString(result)<<" ("<<result<<")"<<" at "<<__FILE__<<":"<<__LINE__; \
        throw OpenMMException(m.str());\
    }


#ifdef OPENMM_COMMON_BUILDING_STATIC_LIBRARY
extern "C" void registerHipPlatform() {
    Platform::registerPlatform(new HipPlatform());
}
#else
extern "C" OPENMM_EXPORT_COMMON void registerPlatforms() {
    Platform::registerPlatform(new HipPlatform());
}
#endif

HipPlatform::HipPlatform() {
    deprecatedPropertyReplacements["HipDeviceIndex"] = HipDeviceIndex();
    deprecatedPropertyReplacements["HipDeviceName"] = HipDeviceName();
    deprecatedPropertyReplacements["HipUseBlockingSync"] = HipUseBlockingSync();
    deprecatedPropertyReplacements["HipPrecision"] = HipPrecision();
    deprecatedPropertyReplacements["HipUseCpuPme"] = HipUseCpuPme();
    deprecatedPropertyReplacements["HipTempDirectory"] = HipTempDirectory();
    deprecatedPropertyReplacements["HipDisablePmeStream"] = HipDisablePmeStream();
    deprecatedPropertyReplacements["HipDeterministicForces"] = HipDeterministicForces();
    HipKernelFactory* factory = new HipKernelFactory();
    registerKernelFactory(CalcForcesAndEnergyKernel::Name(), factory);
    registerKernelFactory(UpdateStateDataKernel::Name(), factory);
    registerKernelFactory(ApplyConstraintsKernel::Name(), factory);
    registerKernelFactory(VirtualSitesKernel::Name(), factory);
    registerKernelFactory(CalcHarmonicBondForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomBondForceKernel::Name(), factory);
    registerKernelFactory(CalcHarmonicAngleForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomAngleForceKernel::Name(), factory);
    registerKernelFactory(CalcPeriodicTorsionForceKernel::Name(), factory);
    registerKernelFactory(CalcRBTorsionForceKernel::Name(), factory);
    registerKernelFactory(CalcCMAPTorsionForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomTorsionForceKernel::Name(), factory);
    registerKernelFactory(CalcNonbondedForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomNonbondedForceKernel::Name(), factory);
    registerKernelFactory(CalcGBSAOBCForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomGBForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomExternalForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomHbondForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomCentroidBondForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomCompoundBondForceKernel::Name(), factory);
95
    registerKernelFactory(CalcCustomCPPForceKernel::Name(), factory);
96
97
98
99
100
101
102
103
104
105
106
107
108
109
    registerKernelFactory(CalcCustomCVForceKernel::Name(), factory);
    registerKernelFactory(CalcRMSDForceKernel::Name(), factory);
    registerKernelFactory(CalcCustomManyParticleForceKernel::Name(), factory);
    registerKernelFactory(CalcGayBerneForceKernel::Name(), factory);
    registerKernelFactory(IntegrateVerletStepKernel::Name(), factory);
    registerKernelFactory(IntegrateNoseHooverStepKernel::Name(), factory);
    registerKernelFactory(IntegrateLangevinMiddleStepKernel::Name(), factory);
    registerKernelFactory(IntegrateBrownianStepKernel::Name(), factory);
    registerKernelFactory(IntegrateVariableVerletStepKernel::Name(), factory);
    registerKernelFactory(IntegrateVariableLangevinStepKernel::Name(), factory);
    registerKernelFactory(IntegrateCustomStepKernel::Name(), factory);
    registerKernelFactory(ApplyAndersenThermostatKernel::Name(), factory);
    registerKernelFactory(ApplyMonteCarloBarostatKernel::Name(), factory);
    registerKernelFactory(RemoveCMMotionKernel::Name(), factory);
Anton Gorenko's avatar
Anton Gorenko committed
110
    registerKernelFactory(CalcATMForceKernel::Name(), factory);
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
    platformProperties.push_back(HipDeviceIndex());
    platformProperties.push_back(HipDeviceName());
    platformProperties.push_back(HipUseBlockingSync());
    platformProperties.push_back(HipPrecision());
    platformProperties.push_back(HipUseCpuPme());
    platformProperties.push_back(HipTempDirectory());
    platformProperties.push_back(HipDisablePmeStream());
    platformProperties.push_back(HipDeterministicForces());
    setPropertyDefaultValue(HipDeviceIndex(), "");
    setPropertyDefaultValue(HipDeviceName(), "");
    setPropertyDefaultValue(HipUseBlockingSync(), "true");
    setPropertyDefaultValue(HipPrecision(), "single");
    setPropertyDefaultValue(HipUseCpuPme(), "false");
    setPropertyDefaultValue(HipDisablePmeStream(), "false");
    setPropertyDefaultValue(HipDeterministicForces(), "false");
126
127
128
#ifdef _MSC_VER
    setPropertyDefaultValue(HipTempDirectory(), string(getenv("TEMP")));
#else
129
130
131
    char* tmpdir = getenv("TMPDIR");
    string tmp = (tmpdir == NULL ? string(P_tmpdir) : string(tmpdir));
    setPropertyDefaultValue(HipTempDirectory(), tmp);
132
#endif
133
134
135
}

double HipPlatform::getSpeed() const {
136
137
138
139
    // Reduce the speed of the HIP platform if there are no HIP devices in the system,
    // so the OpenCL plaform can be selected as default
    int numDevices;
    return hipGetDeviceCount(&numDevices) != hipErrorNoDevice ? 100 : 40;
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
}

bool HipPlatform::supportsDoublePrecision() const {
    return true;
}

const string& HipPlatform::getPropertyValue(const Context& context, const string& property) const {
    const ContextImpl& impl = getContextImpl(context);
    const PlatformData* data = reinterpret_cast<const PlatformData*>(impl.getPlatformData());
    string propertyName = property;
    if (deprecatedPropertyReplacements.find(property) != deprecatedPropertyReplacements.end())
        propertyName = deprecatedPropertyReplacements.find(property)->second;
    map<string, string>::const_iterator value = data->propertyValues.find(propertyName);
    if (value != data->propertyValues.end())
        return value->second;
    return Platform::getPropertyValue(context, property);
}

void HipPlatform::setPropertyValue(Context& context, const string& property, const string& value) const {
}

void HipPlatform::contextCreated(ContextImpl& context, const map<string, string>& properties) const {
    const string& devicePropValue = (properties.find(HipDeviceIndex()) == properties.end() ?
            getPropertyDefaultValue(HipDeviceIndex()) : properties.find(HipDeviceIndex())->second);
    string blockingPropValue = (properties.find(HipUseBlockingSync()) == properties.end() ?
            getPropertyDefaultValue(HipUseBlockingSync()) : properties.find(HipUseBlockingSync())->second);
    string precisionPropValue = (properties.find(HipPrecision()) == properties.end() ?
            getPropertyDefaultValue(HipPrecision()) : properties.find(HipPrecision())->second);
    string cpuPmePropValue = (properties.find(HipUseCpuPme()) == properties.end() ?
            getPropertyDefaultValue(HipUseCpuPme()) : properties.find(HipUseCpuPme())->second);
    const string& tempPropValue = (properties.find(HipTempDirectory()) == properties.end() ?
            getPropertyDefaultValue(HipTempDirectory()) : properties.find(HipTempDirectory())->second);
    string pmeStreamPropValue = (properties.find(HipDisablePmeStream()) == properties.end() ?
            getPropertyDefaultValue(HipDisablePmeStream()) : properties.find(HipDisablePmeStream())->second);
    string deterministicForcesValue = (properties.find(HipDeterministicForces()) == properties.end() ?
            getPropertyDefaultValue(HipDeterministicForces()) : properties.find(HipDeterministicForces())->second);
    transform(blockingPropValue.begin(), blockingPropValue.end(), blockingPropValue.begin(), ::tolower);
    transform(precisionPropValue.begin(), precisionPropValue.end(), precisionPropValue.begin(), ::tolower);
    transform(cpuPmePropValue.begin(), cpuPmePropValue.end(), cpuPmePropValue.begin(), ::tolower);
    transform(pmeStreamPropValue.begin(), pmeStreamPropValue.end(), pmeStreamPropValue.begin(), ::tolower);
    transform(deterministicForcesValue.begin(), deterministicForcesValue.end(), deterministicForcesValue.begin(), ::tolower);
    vector<string> pmeKernelName;
    pmeKernelName.push_back(CalcPmeReciprocalForceKernel::Name());
    if (!supportsKernels(pmeKernelName))
        cpuPmePropValue = "false";
    int threads = getNumProcessors();
    char* threadsEnv = getenv("OPENMM_CPU_THREADS");
    if (threadsEnv != NULL)
        stringstream(threadsEnv) >> threads;
189
190
    context.setPlatformData(new PlatformData(&context, context.getSystem(), devicePropValue, blockingPropValue, precisionPropValue, cpuPmePropValue, tempPropValue,
            pmeStreamPropValue, deterministicForcesValue, threads, NULL));
191
192
193
194
195
196
197
198
199
200
201
202
}

void HipPlatform::linkedContextCreated(ContextImpl& context, ContextImpl& originalContext) const {
    Platform& platform = originalContext.getPlatform();
    string devicePropValue = platform.getPropertyValue(originalContext.getOwner(), HipDeviceIndex());
    string blockingPropValue = platform.getPropertyValue(originalContext.getOwner(), HipUseBlockingSync());
    string precisionPropValue = platform.getPropertyValue(originalContext.getOwner(), HipPrecision());
    string cpuPmePropValue = platform.getPropertyValue(originalContext.getOwner(), HipUseCpuPme());
    string tempPropValue = platform.getPropertyValue(originalContext.getOwner(), HipTempDirectory());
    string pmeStreamPropValue = platform.getPropertyValue(originalContext.getOwner(), HipDisablePmeStream());
    string deterministicForcesValue = platform.getPropertyValue(originalContext.getOwner(), HipDeterministicForces());
    int threads = reinterpret_cast<PlatformData*>(originalContext.getPlatformData())->threads.getNumThreads();
203
204
    context.setPlatformData(new PlatformData(&context, context.getSystem(), devicePropValue, blockingPropValue, precisionPropValue, cpuPmePropValue, tempPropValue,
            pmeStreamPropValue, deterministicForcesValue, threads, &originalContext));
205
206
207
208
209
210
211
212
}

void HipPlatform::contextDestroyed(ContextImpl& context) const {
    PlatformData* data = reinterpret_cast<PlatformData*>(context.getPlatformData());
    delete data;
}

HipPlatform::PlatformData::PlatformData(ContextImpl* context, const System& system, const string& deviceIndexProperty, const string& blockingProperty, const string& precisionProperty,
213
            const string& cpuPmeProperty, const string& tempProperty, const string& pmeStreamProperty,
214
            const string& deterministicForcesProperty, int numThreads, ContextImpl* originalContext) :
215
216
                context(context), removeCM(false), stepCount(0), computeForceCount(0), time(0.0), hasInitializedContexts(false),
                threads(numThreads) {
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
    bool blocking = (blockingProperty == "true");
    vector<string> devices;
    size_t searchPos = 0, nextPos;
    while ((nextPos = deviceIndexProperty.find_first_of(", ", searchPos)) != string::npos) {
        devices.push_back(deviceIndexProperty.substr(searchPos, nextPos-searchPos));
        searchPos = nextPos+1;
    }
    devices.push_back(deviceIndexProperty.substr(searchPos));
    PlatformData* originalData = NULL;
    if (originalContext != NULL)
        originalData = reinterpret_cast<PlatformData*>(originalContext->getPlatformData());
    try {
        for (int i = 0; i < (int) devices.size(); i++) {
            if (devices[i].length() > 0) {
                int deviceIndex;
                stringstream(devices[i]) >> deviceIndex;
233
                contexts.push_back(new HipContext(system, deviceIndex, blocking, precisionProperty, tempProperty, *this, (originalData == NULL ? NULL : originalData->contexts[i])));
234
235
236
            }
        }
        if (contexts.size() == 0)
237
            contexts.push_back(new HipContext(system, -1, blocking, precisionProperty, tempProperty, *this, (originalData == NULL ? NULL : originalData->contexts[0])));
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
    }
    catch (...) {
        // If an exception was thrown, do our best to clean up memory.

        for (int i = 0; i < (int) contexts.size(); i++)
            delete contexts[i];
        throw;
    }
    stringstream deviceIndex, deviceName;
    for (int i = 0; i < (int) contexts.size(); i++) {
        if (i > 0) {
            deviceIndex << ',';
            deviceName << ',';
        }
        deviceIndex << contexts[i]->getDeviceIndex();
        char name[1000];
        CHECK_RESULT(hipDeviceGetName(name, 1000, contexts[i]->getDevice()), "Error querying device name");
        deviceName << name;
    }

    useCpuPme = (cpuPmeProperty == "true" && !contexts[0]->getUseDoublePrecision());
    disablePmeStream = (pmeStreamProperty == "true");
    deterministicForces = (deterministicForcesProperty == "true");
    propertyValues[HipPlatform::HipDeviceIndex()] = deviceIndex.str();
    propertyValues[HipPlatform::HipDeviceName()] = deviceName.str();
    propertyValues[HipPlatform::HipUseBlockingSync()] = blocking ? "true" : "false";
    propertyValues[HipPlatform::HipPrecision()] = precisionProperty;
    propertyValues[HipPlatform::HipUseCpuPme()] = useCpuPme ? "true" : "false";
    propertyValues[HipPlatform::HipTempDirectory()] = tempProperty;
    propertyValues[HipPlatform::HipDisablePmeStream()] = disablePmeStream ? "true" : "false";
    propertyValues[HipPlatform::HipDeterministicForces()] = deterministicForces ? "true" : "false";
    contextEnergy.resize(contexts.size());

    // Determine whether peer-to-peer copying is supported, and enable it if so.

    peerAccessSupported = true;
    for (int i = 1; i < contexts.size(); i++) {
        int canAccess;
        hipDeviceCanAccessPeer(&canAccess, contexts[i]->getDevice(), contexts[0]->getDevice());
        if (!canAccess) {
            peerAccessSupported = false;
            break;
        }
    }
}

HipPlatform::PlatformData::~PlatformData() {
    for (int i = 0; i < (int) contexts.size(); i++)
        delete contexts[i];
}

void HipPlatform::PlatformData::initializeContexts(const System& system) {
    if (hasInitializedContexts)
        return;
    for (int i = 0; i < (int) contexts.size(); i++)
        contexts[i]->initialize();
    hasInitializedContexts = true;
}

void HipPlatform::PlatformData::syncContexts() {
    for (int i = 0; i < (int) contexts.size(); i++)
        contexts[i]->getWorkThread().flush();
}