TestCudaSort.cpp

/* -------------------------------------------------------------------------- *
 *                                   OpenMM                                   *
 * -------------------------------------------------------------------------- *
 * This is part of the OpenMM molecular simulation toolkit originating from   *
 * Simbios, the NIH National Center for Physics-Based Simulation of           *
 * Biological Structures at Stanford, funded under the NIH Roadmap for        *
 * Medical Research, grant U54 GM072970. See https://simtk.org.               *
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 * Portions copyright (c) 2008-2016 Stanford University and the Authors.      *
 * Authors: Peter Eastman                                                     *
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/**
 * This tests the CUDA implementation of sorting.
 */

#include "openmm/internal/AssertionUtilities.h"
#include "CudaArray.h"
#include "CudaContext.h"
#include "CudaSort.h"
#include "sfmt/SFMT.h"
#include "openmm/System.h"
#include <iostream>
#include <cmath>
#include <set>

using namespace OpenMM;
using namespace std;

CudaPlatform platform;

class SortTrait : public CudaSort::SortTrait {
    int getDataSize() const {return 4;}
    int getKeySize() const {return 4;}
    const char* getDataType() const {return "float";}
    const char* getKeyType() const {return "float";}
    const char* getMinKey() const {return "-3.40282e+38f";}
    const char* getMaxKey() const {return "3.40282e+38f";}
    const char* getMaxValue() const {return "3.40282e+38f";}
    const char* getSortKey() const {return "value";}
};

void verifySorting(vector<float> array) {
    // Sort the array.

    System system;
    system.addParticle(0.0);
    CudaPlatform::PlatformData platformData(NULL, system, "", "true", platform.getPropertyDefaultValue("CudaPrecision"), "false",
            platform.getPropertyDefaultValue(CudaPlatform::CudaCompiler()), platform.getPropertyDefaultValue(CudaPlatform::CudaTempDirectory()),
            platform.getPropertyDefaultValue(CudaPlatform::CudaHostCompiler()), platform.getPropertyDefaultValue(CudaPlatform::CudaDisablePmeStream()), "false", true, 1, NULL);
    CudaContext& context = *platformData.contexts[0];
    context.initialize();
    context.setAsCurrent();
    CudaArray data(context, array.size(), 4, "sortData");
    data.upload(array);
    CudaSort sort(context, new SortTrait(), array.size());
    sort.sort(data);
    vector<float> sorted;
    data.download(sorted);

    // Verify that it is in sorted order.

    for (int i = 1; i < (int) sorted.size(); i++)
        ASSERT(sorted[i-1] <= sorted[i]);

    // Make sure the sorted array contains the same values as the original one.

    multiset<float> elements1(array.begin(), array.end());
    multiset<float> elements2(sorted.begin(), sorted.end());
    ASSERT(elements1 == elements2);
}

void testUniformValues() {
    OpenMM_SFMT::SFMT sfmt;
    init_gen_rand(0, sfmt);

    vector<float> array(10000);
    for (int i = 0; i < (int) array.size(); i++)
        array[i] = (float) genrand_real2(sfmt);
    verifySorting(array);
}

void testLogValues() {
    OpenMM_SFMT::SFMT sfmt;
    init_gen_rand(0, sfmt);

    vector<float> array(10000);
    for (int i = 0; i < (int) array.size(); i++)
        array[i] = (float) log(genrand_real2(sfmt));
    verifySorting(array);
}

void testShortList() {
    OpenMM_SFMT::SFMT sfmt;
    init_gen_rand(0, sfmt);

    vector<float> array(500);
    for (int i = 0; i < (int) array.size(); i++)
        array[i] = (float) log(genrand_real2(sfmt));
    verifySorting(array);
}

int main(int argc, char* argv[]) {
    try {
        if (argc > 1)
            platform.setPropertyDefaultValue("CudaPrecision", string(argv[1]));
        testUniformValues();
        testLogValues();
        testShortList();
    }
    catch(const exception& e) {
        cout << "exception: " << e.what() << endl;
        return 1;
    }
    cout << "Done" << endl;
    return 0;
}