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* Update README.md

Current hyperlink for Meng et al. 2016 points to an incorrect proceeding at NeurIPS

* update one more link

---------
Co-authored-by: James Lamb <jaylamb20@gmail.com>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

fix a typo in docs/Features.rst

* Correct spelling

Most changes were in comments, and there were a few changes to literals for log output.

There were no changes to variable names, function names, IDs, or functionality.

* Clarify a phrase in a comment
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Clarify a phrase in a comment
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Clarify a phrase in a comment
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Correct spelling

Most are code comments, but one case is a literal in a logging message.

There are a few grammar fixes too.
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [docs]Add alt text on images

* Update docs/GPU-Windows.rst
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* Update docs/GPU-Windows.rst
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* Apply suggestions from code review
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Apply suggestions from code review
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* Merge main branch commit updates (#1)

* [docs] Add alt text to image in Parameters-Tuning.rst (#4035)

* [docs] Add alt text to image in Parameters-Tuning.rst

Add alt text to Leaf-wise growth image, as part of #4028

* Update docs/Parameters-Tuning.rst
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Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [ci] [R-package] upgrade to R 4.0.4 in CI (#4042)

* [docs] update description of deterministic parameter (#4027)

* update description of deterministic parameter to require using with force_row_wise or force_col_wise

* Update include/LightGBM/config.h
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* update docs
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [dask] Include support for init_score (#3950)

* include support for init_score

* use dataframe from init_score and test difference with and without init_score in local model

* revert refactoring

* initial docs. test between distributed models with and without init_score

* remove ranker from tests

* test value for root node and change docs

* comma

* re-include parametrize

* fix incorrect merge

* use single init_score and the booster_ attribute

* use np.float64 instead of float

* [ci] ignore untitle Jupyter notebooks in .gitignore (#4047)

* [ci] prevent getting incompatible dask and distributed versions (#4054)

* [ci] prevent getting incompatible dask and distributed versions

* Update .ci/test.sh
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* empty commit
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* [ci] fix R CMD CHECK note about example timings (fixes #4049) (#4055)

* [ci] fix R CMD CHECK note about example timings (fixes #4049)

* Apply suggestions from code review
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* empty commit
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* [ci] add CMake + R 3.6 test back (fixes #3469) (#4053)

* [ci] add CMake + R 3.6 test back (fixes #3469)

* Apply suggestions from code review
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* Update .ci/test_r_package_windows.ps1

* -Wait and remove rtools40

* empty commit
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* [dask] include multiclass-classification task in tests (#4048)

* include multiclass-classification task and task_to_model_factory dicts

* define centers coordinates. flatten init_scores within each partition for multiclass-classification

* include issue comment and fix linting error

* Update index.rst (#4029)

Add alt text to logo image
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [dask] raise more informative error for duplicates in 'machines' (fixes #4057) (#4059)

* [dask] raise more informative error for duplicates in 'machines'

* uncomment

* avoid test failure

* Revert "avoid test failure"

This reverts commit 9442bdf00f193a19a923dc0deb46b7822cb6f601.

* [dask] add tutorial documentation (fixes #3814, fixes #3838) (#4030)

* [dask] add tutorial documentation (fixes #3814, fixes #3838)

* add notes on saving the model

* quick start examples

* add examples

* fix timeouts in examples

* remove notebook

* fill out prediction section

* table of contents

* add line back

* linting

* isort

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* move examples under python-guide

* remove unused pickle import
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* set 'pending' commit status for R Solaris optional workflow (#4061)

* [docs] add Yu Shi to repo maintainers (#4060)

* Update FAQ.rst

* Update CODEOWNERS

* set is_linear_ to false when it is absent from the model file (fix #3778) (#4056)

* Add CMake option to enable sanitizers and build gtest (#3555)

* Add CMake option to enable sanitizer

* Set up gtest

* Address reviewer's feedback

* Address reviewer's feedback

* Update CMakeLists.txt
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* added type hint (#4070)

* [ci] run Dask examples on CI (#4064)

* Update Parallel-Learning-Guide.rst

* Update test.sh

* fix path

* address review comments

* [python-package] add type hints on Booster.set_network() (#4068)

* [python-package] add type hints on Booster.set_network()

* change behavior

* [python-package] Some mypy fixes (#3916)

* Some mypy fixes

* address James' comments

* Re-introduce pass in empty classes

* Update compat.py

Remove extra lines

* [dask] [ci] fix flaky network-setup test (#4071)

* [tests][dask] simplify code in Dask tests (#4075)

* simplify Dask tests code

* enable CI

* disable CI

* Revert "[ci] prevent getting incompatible dask and distributed versions (#4054)" (#4076)

This reverts commit 4e9c9768

.

* Fix parsing of non-finite values (#3942)

* Fix index out-of-range exception generated by BaggingHelper on small datasets.

Prior to this change, the line "score_t threshold = tmp_gradients[top_k - 1];" would generate an exception, since tmp_gradients would be empty when the cnt input value to the function is zero.

* Update goss.hpp

* Update goss.hpp

* Add API method LGBM_BoosterPredictForMats which runs prediction on a data set given as of array of pointers to rows (as opposed to existing method LGBM_BoosterPredictForMat which requires data given as contiguous array)

* Fix incorrect upstream merge

* Add link to LightGBM.NET

* Fix indenting to 2 spaces

* Dummy edit to trigger CI

* Dummy edit to trigger CI

* remove duplicate functions from merge

* Fix parsing of non-finite values.  Current implementation silently returns zero when input string is "inf", "-inf", or "nan" when compiled with VS2017, so instead just explicitly check for these values and fail if there is no match.  No attempt to optimise string allocations in this implementation since it is usually rarely invoked.

* Dummy commit to trigger CI

* Also handle -nan in double parsing method

* Update include/LightGBM/utils/common.h

Remove trailing whitespace to pass linting tests
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
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Co-authored-by: Guolin Ke <guolin.ke@outlook.com>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [dask] remove unused imports from typing (#4079)

* Range check for DCG position discount lookup (#4069)

* Add check to prevent out of index lookup in the position discount table. Add debug logging to report number of queries found in the data.

* Change debug logging location so that we can print the data file name as well.

* Revert "Change debug logging location so that we can print the data file name as well."

This reverts commit 3981b34bd6e0530f89c4733e78e6b6603bf50d48.

* Add data file name to debug logging.

* Move log line to a place where it is output even when query IDs are read from a separate file.

* Also add the out-of-range check to rank metrics.

* Perform check after number of queries is initialized.

* Update

* [ci] upgrade R CI scripts to work on Ubuntu 20.04 (#4084)

* [ci] install additional LaTeX packages in R CI jobs

* update autoconf version

* bump upper limit on package size to 100

* [SWIG] Add streaming data support + cpp tests (#3997)

* [feature] Add ChunkedArray to SWIG

* Add ChunkedArray
* Add ChunkedArray_API_extensions.i
* Add SWIG class wrappers

* Address some review comments

* Fix linting issues

* Move test to tests/test_ChunkedArray_manually.cpp

* Add test note

* Move ChunkedArray to include/LightGBM/utils/

* Declare more explicit types of ChunkedArray in the SWIG API.

* Port ChunkedArray tests to googletest

* Please C++ linter

* Address StrikerRUS' review comments

* Update SWIG doc & disable ChunkedArray<int64_t>

* Use CHECK_EQ instead of assert

* Change include order (linting)

* Rename ChunkedArray -> chunked_array files

* Change header guards

* Address last comments from StrikerRUS

* store all CMake files in one place (#4087)

* v3.2.0 release (#3872)

* Update VERSION.txt

* update appveyor.yml and configure

* fix Appveyor builds
Co-authored-by: James Lamb <jaylamb20@gmail.com>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: StrikerRUS <nekit94-12@hotmail.com>

* [ci] Bump version for development (#4094)

* Update .appveyor.yml

* Update cran-comments.md

* Update VERSION.txt

* update configure
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [ci] fix flaky Azure Pipelines jobs (#4095)

* Update test.sh

* Update setup.sh

* Update .vsts-ci.yml

* Update test.sh

* Update setup.sh

* Update .vsts-ci.yml

* Update setup.sh

* Update setup.sh
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Co-authored-by: Deddy Jobson <dedjob@hotmail.com>
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* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: James Lamb <jaylamb20@gmail.com>
Co-authored-by: Subham Agrawal <34346812+subhamagrawal7@users.noreply.github.com>
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Co-authored-by: marcelonieva7 <72712805+marcelonieva7@users.noreply.github.com>
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
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* rework distributed learning page

* more references

* more changes

* more changes

* add anchors for olds links

* revert changes from #4000

* fix links

* more links

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Update docs/Parallel-Learning-Guide.rst
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [docs] Change some 'parallel learning' references to 'distributed learning'

* found a few more

* one more reference

* [docs] update documentation with AUC-mu, average precision

* change formatting

* fixed broken link

* use another link

* Update Features.rst

* Update .appveyor.yml

* Update test_windows.ps1

* Update test_windows.ps1

* Update .appveyor.yml

* Update test_windows.ps1

* Update .appveyor.yml

* fixed Python intro

* fixed typos

* scikit-learn added support of https

Signed-off-by: Marcela Morales Quispe <marcela.morales.quispe@gmail.com>

* unified references

* fixed typo

* GPU version is quite stable now

* updated reference for GPU version

* added permalink to each parameter

* run parameter_generator.py

* concretized links

* hotfix

* run parameter_generator.py

* added space between param name and permalink

* added info about initscore_filename in Continued Training section and edited links

* replaced aliases for weight and group with original names

* disable emoji

* A nitpicky grammer edit with minor clarifications added.

* fix link

* strike s

* try a different optimal-split link, clarify experimental details

* smoothing the FAQ

* edit Features.rst

* several minor edits throughout docs

* historgram-based

* added checks for categorical features > max_int32

* added tests

* fixed pylint

* removed warnings about overridden categorical features

* Revert "removed warnings about overridden categorical features"

This reverts commit 289a426c700ce8934a526cc456a1b1cd5c621db9.

* a little bit more efficient checks

* added notes about max values in categorical features

* Revert "a little bit more efficient checks"

This reverts commit bed88830243da21a2db454873c0e308126e05732.

* Revert "fixed pylint"

This reverts commit a229e1563b0abc1b13de6358577abf90bd529015.

* Revert "added tests"

This reverts commit 299e001b7550111555b80730d673d4f225cf5f74.

* Revert "added checks for categorical features > max_int32"

This reverts commit 2cc7afacde7c6366644f6988ccedc344752b68c7.

* fix broken url

* Update Features.rst

* added cross-entropy into Features

* added aliases

* fixed typos and hotfixes

* converted gcc-tips.Rmd; added ref to gcc-tips

* renamed files

* renamed Advanced-Topics

* renamed README

* renamed Parameters-Tuning

* renamed FAQ

* fixed refs to FAQ

* fixed undecodable source characters

* renamed Features

* renamed Quick-Start

* fixed undecodable source characters in Features

* renamed Python-Intro

* renamed GPU-Tutorial

* renamed GPU-Windows

* fixed markdown

* fixed undecodable source characters in GPU-Windows

* renamed Parameters

* fixed markdown

* removed recommonmark dependence

* hotfixes

* added anchors to links

* fixed 404

* fixed typos

* added more anchors

* removed sphinxcontrib-napoleon dependence

* removed outdated line in Travis config

* fixed max-width of the ReadTheDocs theme

* added horizontal align to images