GitLab

* [R-package] make package installable with CRAN toolchain (fixes #2960)

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* remove GPU stuff

* use wildcard to find objects to build

* use -lomp

* build configure before moving files

* using wildcard for objects

* Update .github/workflows/main.yml
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add explicit objects back

* reduce allowed R CMD check NOTEs and catch stderr from build-cran-package on Windows

* fixing things

* pin autoconf version

* show diff

* add automake back

* run less checks

* command was in the wrong place

* fix autoconf version

* change strategy for handling configure

* fix Rbuildignore

* fix NOTEs

* fix notes about unrecognized files

* fixing extra files

* remove USE_R35

* add OpenMP check for Mac CRAN build

* run all checks

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* suggestions from code review

* undo indenting

* remove 03 from Makevars.win.in

* update language about OpenMP in configure script

* checking if configure.ac check works

* add autoconf back

* remove testing code in configure.ac

* more fixes for CI on configure script

* print git diff

* add VERSION.txt when checking configure

* fix relative paths

* remove git diff
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [ci] remove unnecessary R_CHECK_FORCE_SUGGESTS in CI scripts

* remove unused test data

* more changes

* factor out ggplot2

* update CI

* remove library()

* linting

* reduce NOTEs on Windows

* [ci] [R-package] catch builds that have not updated docs

* drop reliance on .Renviron

* remove docs changes

* Update .ci/test_r_package.sh
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* make all R tasks start with r-package
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [R-package] replaced gendef.exe with R code to create R.def (fixes #3064)

* fix broken things

* trying to add R4.0 docs

* changed make

* fixing make paths

* update notes on environment variables

* fix linting

* fixes to CI

* fixing build_cmd and other stuff

* fix bad substitution

* fix Azure Linux builds

* I am bad at bash

* simplifying

* only testing R

* getting better logs

* mingw32

* docs

* toolchain

* using msys

* fix visual studio condition

* toolchain test

* full CI

* fix if-elses

* bump allowed NOTEs

* search for Rscript

* updates to docs

* use processx

* fix mismatched arguments

* move CI to GitHub Actions

* minor changes

* fix workflow file

* fix templating

* fix Azure DevOps

* debugging windows builds

* dont shQuote file name

* all GitHub Actions jobs

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* minor cleanup

* remove objdump printing

* make file.remove() invisible

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* reduce duplicated paths in docs
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* GitHub Actions

* ok

* fixing on list

* stuff

* directories

* directories

* things

* env variables

* working dir

* running a bunch of tasks

* more builds

* PATH

* actually use R task

* TASK

* be right, often

* doing stuff

* trying stuff

* more paths

* conda activate

* updating PATH

* trying bash

* where the hell is activate

* WHERE IS ACTIVATE

* set up conda

* more conda

* PLEASE WORK

* installing cpplint

* try r-package

* R version

* try windows job

* make windows work

* use powershell

* exe

* use conda

* conda init powershell

* different conda approach

* make it work

* cleaning up

* init powershell

* fixing windows

* more windows

* build directory

* no way right

* maybe it will work

* trying Visual Studio

* do this

* Windows is interesting

* put back check-output

* set compiler

* stuff

* more fixes

* fix the broken things

* updating jobs

* continuing

* poweshell is bad

* ok so maybe not powershell

* cmon now

* ok so

* fixing env variables

* maybe this

* MINGW job

* cleaning up

* conda init powershell

* moving more R stuff into GitHub Actions

* everything else

* use powershell

* cmon now powershell

* ttry to Continue

* override powershell

* peg MiKTeX URL

* what is happening

* try powershell -File

* trying stuff

* path

* more testing of output

* Matches uppercase

* more regex stuff

* this is getting ridiculous

* back to powershell I guess

* more commands

* this might work

* adding more reliable miktex download

* trying to download miktex

* installing httr

* fix error in MiKTeX script

* remove comments

* redirect output

* redirect output

* move linting back to Travis

* change redirection

* switch back to just mac and linux

* put linting exclude back

* renamed R_TRAVIS_LINUX

* revert changes to non-R tasks and update events

* simplify

* [R-package] use processx to speed up builds

* different fix

* echoing more frequently

* fix it

* more stdout

* use print() instead of message()

* shell tricks

* fix message

* travis

* Update .ci/test_r_package.sh
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Path smoothing

* Try to fix issue with gpu version.

* Fix failing CI for R package.

* Minor fixes.

* Minor refactor.

* Restore old code to get CI working.

* Fix style issues.

* Fix ci for R package.

* Minor fixes for docs and code style.

* Update docs.

* Update test.sh

* update brew to pull new URL for basictex

* downdrage sphinx

* fix latex errors

* Revert "fix latex errors"

This reverts commit 3cdf64748ea4dc7083f7b5de4c40ff659a17de65.

* skip checksum verification

Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Update setup.sh

* install only binary R packages on macOS