GitLab

* Update test_r_package_windows.ps1

* Update test_r_package.sh

* Update r_package.yml

* Update r_package.yml

* [ci] parallelize R package installs in CI jobs

* build 2

* build 3

* add ncpus in static_analysis

* [ci] Add debian-clang-devel CI job for the R package

* [ci] Add debian-clang-devel CI job for the R package

* fixes

* fix test

* update cran-comments

* re-trigger CI

* catch warnings and notes

* fail with only a NOTE

* uncomment CI code

* remove env vars in windows tests

* Update R-package/cran-comments.md
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: StrikerRUS <nekit94-12@hotmail.com>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [ci] upgrade R to 4.0.5

* get R 4.0.5 from focal repo

* [ci] run 'brew update' in macOS jobs (fixes #4160)

* move update

* [ci] install additional LaTeX packages in R CI jobs

* update autoconf version

* bump upper limit on package size to 100

* [ci] fix R CMD CHECK note about example timings (fixes #4049)

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* empty commit
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [ci] prefer older binary to new source for R packages

* back to binary

* preserve choice on Linux

* Update test_r_package.sh

* Update dockerfile.gpu

* Update dockerfile-python

* Update setup.sh

* Update setup.sh

* Update test_r_package.sh

* Update r_package.yml

* Update r_package.yml

* [ci] fall back to source installs of R packages if binary missing

* source option

* changing source policy

* install withr separately

* uncomment CI

* [ci] Move check-docs and lint jobs off Travis

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* try moving check-docs into a containerized job

* add install flag and README badge

* trying to find the error

* ignore pipefail

* remove -e

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* more changes

* additional changes

* Update .github/workflows/static_analysis.yml

* Update README.md
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* move constants
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [ci] [R-package] fix issue with partial argument name matches

* fix partial name matches

* simpler NOTE check

* change conditions

* simplify

* [ci] always use latest conda version on GitHub Actions

* try new use-conda version

* just remove conda

* skip conda even more

* [ci] simplify R CI scripts

* update GitHub Actions workflow

* [ci] ignore R CMD CHECK warnings on new R version

* just update version

* Modified script to also remove pragma warnings.

This also includes modifying the scope of the pragma removal.
Previously this script only searched inside the ./src/include/LightGMB directory.
This was not inclusive enough to remove the warnings in files shown in the ticket.

* Adds CI test that exits if unknown pragma warnings are present.

* Expanding pragma removal to cpp and hpp files.

* Update .ci/test_r_package.sh

Removing unneeded conditions since this script will only run on Linux and Mac builds anyway.
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Update .ci/test_r_package.sh

Fixes typo
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* replacing double quotes with single quotes

* Using a more portable find syntax so it works on macOS and Linux
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [R-package] update DESCRIPTION per CRAN comments

* newlines

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* more fixes

* update Rbuildignore

* more changes

* more changes per CRAN response

* add email

* run examples in CI

* add newest CRAN response

* add Solaris patch

* update patch

* another attempt at ifaddrs patch

* fix unnecessary comment

* update configure

* comments

* bump version

* tabs

* fix address alignment, required by cran (#3415)

* fix dataset binary file alignment

* many fixes

* fix warnings

* fix bug

* Update file_io.cpp

* Update file_io.cpp

* simplify code

* Apply suggestions from code review

* general

* remove unneeded alignment

* Update file_io.h

* int32 to byte8 alignment

* Apply suggestions from code review

* Apply suggestions from code review

* [R-package] add new copyright holder in DESCRIPTION (#3409)

* [R-package] add new copyright holder in DESCRIPTION

* fix role

* fixing conflicts

* [R-package] add new copyright holder in DESCRIPTION (#3409)

* [R-package] add new copyright holder in DESCRIPTION

* fix role

* trying to fix conflicts

* more fixes

* this will work

* update cran-comments

* simplify solaris, add more testing docs

* stuff

* remove rchck docs

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* remove extra use of cat()

* change solaris check

* update docs

* remove testing code

* fix warning about cleanup not having execute permissions

* fix cmake builds

* remove blank line
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* [R-package] add 'cleanup' script to handle left-behind Makevars

* always install library for checkbashisms

* [ci] remove texlive-fonts-extra and Azure checks R from CI

* put texlive-fonts-extra back

* [R-package] [ci] Reduce manual effort for version updates

* fix configure

* remove useless comment

* Update build_r.R
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* fix recreate-configure check in CI
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* Update VERSION.txt

* Update VERSION.txt

* Update setup.py

* Update VERSION.txt

* Update setup.py

* Update VERSION.txt

* Update .appveyor.yml

* Update DESCRIPTION

* Apply suggestions from code review

* Apply suggestions from code review

* Update DESCRIPTION

* Apply suggestions from code review

* Create VERSION.txt

* Apply suggestions from code review

* Update .gitignore

* Update recreate-configure.sh

* Update test_r_package.sh

* Update build-cran-package.sh

* Delete VERSION.txt

* Create VERSION.txt

* Update main.yml

* Update test_r_package_windows.ps1

* Update configure

* Update test_r_package_windows.ps1

* Update test_r_package.sh

* Delete VERSION.txt

* Apply suggestions from code review

* update configure.ac
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Move all examples to dontrun

* update docs

* fix nested dontrun

* remove :: in examples

* run_dontrun in pkgdown
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [R-package] make package installable with CRAN toolchain (fixes #2960)

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* remove GPU stuff

* use wildcard to find objects to build

* use -lomp

* build configure before moving files

* using wildcard for objects

* Update .github/workflows/main.yml
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add explicit objects back

* reduce allowed R CMD check NOTEs and catch stderr from build-cran-package on Windows

* fixing things

* pin autoconf version

* show diff

* add automake back

* run less checks

* command was in the wrong place

* fix autoconf version

* change strategy for handling configure

* fix Rbuildignore

* fix NOTEs

* fix notes about unrecognized files

* fixing extra files

* remove USE_R35

* add OpenMP check for Mac CRAN build

* run all checks

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* suggestions from code review

* undo indenting

* remove 03 from Makevars.win.in

* update language about OpenMP in configure script

* checking if configure.ac check works

* add autoconf back

* remove testing code in configure.ac

* more fixes for CI on configure script

* print git diff

* add VERSION.txt when checking configure

* fix relative paths

* remove git diff
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [ci] remove unnecessary R_CHECK_FORCE_SUGGESTS in CI scripts

* remove unused test data

* more changes

* factor out ggplot2

* update CI

* remove library()

* linting

* reduce NOTEs on Windows

* [ci] [R-package] catch builds that have not updated docs

* drop reliance on .Renviron

* remove docs changes

* Update .ci/test_r_package.sh
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* make all R tasks start with r-package
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [R-package] replaced gendef.exe with R code to create R.def (fixes #3064)

* fix broken things

* trying to add R4.0 docs

* changed make

* fixing make paths

* update notes on environment variables

* fix linting

* fixes to CI

* fixing build_cmd and other stuff

* fix bad substitution

* fix Azure Linux builds

* I am bad at bash

* simplifying

* only testing R

* getting better logs

* mingw32

* docs

* toolchain

* using msys

* fix visual studio condition

* toolchain test

* full CI

* fix if-elses

* bump allowed NOTEs

* search for Rscript

* updates to docs

* use processx

* fix mismatched arguments

* move CI to GitHub Actions

* minor changes

* fix workflow file

* fix templating

* fix Azure DevOps

* debugging windows builds

* dont shQuote file name

* all GitHub Actions jobs

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* minor cleanup

* remove objdump printing

* make file.remove() invisible

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* reduce duplicated paths in docs
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* GitHub Actions

* ok

* fixing on list

* stuff

* directories

* directories

* things

* env variables

* working dir

* running a bunch of tasks

* more builds

* PATH

* actually use R task

* TASK

* be right, often

* doing stuff

* trying stuff

* more paths

* conda activate

* updating PATH

* trying bash

* where the hell is activate

* WHERE IS ACTIVATE

* set up conda

* more conda

* PLEASE WORK

* installing cpplint

* try r-package

* R version

* try windows job

* make windows work

* use powershell

* exe

* use conda

* conda init powershell

* different conda approach

* make it work

* cleaning up

* init powershell

* fixing windows

* more windows

* build directory

* no way right

* maybe it will work

* trying Visual Studio

* do this

* Windows is interesting

* put back check-output

* set compiler

* stuff

* more fixes

* fix the broken things

* updating jobs

* continuing

* poweshell is bad

* ok so maybe not powershell

* cmon now

* ok so

* fixing env variables

* maybe this

* MINGW job

* cleaning up

* conda init powershell

* moving more R stuff into GitHub Actions

* everything else

* use powershell

* cmon now powershell

* ttry to Continue

* override powershell

* peg MiKTeX URL

* what is happening

* try powershell -File

* trying stuff

* path

* more testing of output

* Matches uppercase

* more regex stuff

* this is getting ridiculous

* back to powershell I guess

* more commands

* this might work

* adding more reliable miktex download

* trying to download miktex

* installing httr

* fix error in MiKTeX script

* remove comments

* redirect output

* redirect output

* move linting back to Travis

* change redirection

* switch back to just mac and linux

* put linting exclude back

* renamed R_TRAVIS_LINUX

* revert changes to non-R tasks and update events

* simplify

* [R-package] use processx to speed up builds

* different fix

* echoing more frequently

* fix it

* more stdout

* use print() instead of message()

* shell tricks

* fix message

* travis

* Update .ci/test_r_package.sh
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Path smoothing

* Try to fix issue with gpu version.

* Fix failing CI for R package.

* Minor fixes.

* Minor refactor.

* Restore old code to get CI working.

* Fix style issues.

* Fix ci for R package.

* Minor fixes for docs and code style.

* Update docs.