GitLab

* [R-package] [ci] Reduce manual effort for version updates

* fix configure

* remove useless comment

* Update build_r.R
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* fix recreate-configure check in CI
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* [ci] Test 32-bit builds for R package

* update README

* empty commit

* use integer type for handle

* Apply suggestions from code review

* fix 64bit handle

* [R-package] DESCRIPTION changes to address CRAN feedback

* CRAN likes single quotes

* the regex rules for Rbuildignore are weird

* ugh Rbuildignore

* how does this wooork

* just remove cran-comments.md in script

* adding Biarch back

* Update R-package/cran-comments.md
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add submission 3 notes

* Update R-package/cran-comments.md
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add docs on binary packages

* added docs on binary packages

* [R-package] Add documentation on building and using precompiled binaries for the R package

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* hyphens

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add notes on source package

* add --no-multiarch to docs

* add cran-comments to Rbuildignore

* revert

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

simplify start_iteration param for predict in Python and some code cleanup for start_iteration (#3288)

* simplify start_iteration param for predict in Python and some code cleanup for start_iteration

* revert docs changes about the prediction result shape

* Update VERSION.txt

* Update VERSION.txt

* Update setup.py

* Update VERSION.txt

* Update setup.py

* Update VERSION.txt

* Update .appveyor.yml

* Update DESCRIPTION

* Apply suggestions from code review

* Apply suggestions from code review

* Update DESCRIPTION

* Apply suggestions from code review

* Create VERSION.txt

* Apply suggestions from code review

* Update .gitignore

* Update recreate-configure.sh

* Update test_r_package.sh

* Update build-cran-package.sh

* Delete VERSION.txt

* Create VERSION.txt

* Update main.yml

* Update test_r_package_windows.ps1

* Update configure

* Update test_r_package_windows.ps1

* Update test_r_package.sh

* Delete VERSION.txt

* Apply suggestions from code review

* update configure.ac
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [python] add start_iteration to python predict interface (#3058)

* Apply suggestions from code review

* Update lightgbm_R.h

* Apply suggestions from code review

* Apply suggestions from code review

* fix R interface

* update R documentation
Co-authored-by: Guolin Ke <guolin.ke@outlook.com>

* [R-package] improvements to lgb.convert() functions (fixes #2678, #2681)

* more stuff

* update docs

* remove lgb.convert()

* put internal functions back

* update index

* Move all examples to dontrun

* update docs

* fix nested dontrun

* remove :: in examples

* run_dontrun in pkgdown
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* Update multiclass_objective.hpp

* Apply suggestions from code review

* Update src/objective/multiclass_objective.hpp

* Apply suggestions from code review

* Update test_basic.R

* Update test_basic.R

* Update src/objective/multiclass_objective.hpp
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Apply suggestions from code review
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [R-package] fix early_stopping_round <= 0

* linting

* [R-package] deprecate lgb.prepare() and lgb.prepare2()

* linting

* renaming

* updated docs

* linting

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* one more comment fix

* remove comment about int being dangerous

* empty commit
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [R-package] make package installable with CRAN toolchain (fixes #2960)

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* remove GPU stuff

* use wildcard to find objects to build

* use -lomp

* build configure before moving files

* using wildcard for objects

* Update .github/workflows/main.yml
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* add explicit objects back

* reduce allowed R CMD check NOTEs and catch stderr from build-cran-package on Windows

* fixing things

* pin autoconf version

* show diff

* add automake back

* run less checks

* command was in the wrong place

* fix autoconf version

* change strategy for handling configure

* fix Rbuildignore

* fix NOTEs

* fix notes about unrecognized files

* fixing extra files

* remove USE_R35

* add OpenMP check for Mac CRAN build

* run all checks

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* suggestions from code review

* undo indenting

* remove 03 from Makevars.win.in

* update language about OpenMP in configure script

* checking if configure.ac check works

* add autoconf back

* remove testing code in configure.ac

* more fixes for CI on configure script

* print git diff

* add VERSION.txt when checking configure

* fix relative paths

* remove git diff
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* [R-package] Add tests on lgb.check.eval, lgb.unloader, and lgb.encode.char

* remove accidental test file

* regenerated docs

* [ci] remove unnecessary R_CHECK_FORCE_SUGGESTS in CI scripts

* remove unused test data

* [R-package] add test on importance types

* linting

* more changes

* factor out ggplot2

* update CI

* remove library()

* linting

* reduce NOTEs on Windows

* feature importance type in saved model file

* fix nullptr

* fixed formatting

* fix python/R

* Update src/c_api.cpp

* Apply suggestions from code review
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* fix c_api test

* fix swig

* minor docs improvements and added defines for importance types
Co-authored-by: StrikerRUS <nekit94-12@hotmail.com>
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* Add interaction constraints functionality.

* Minor fixes.

* Minor fixes.

* Change lambda to function.

* Fix gpu bug, remove extra blank lines.

* Fix gpu bug.

* Fix style issues.

* Try to fix segfault on MACOS.

* Fix bug.

* Fix bug.

* Fix bugs.

* Change parameter format for R.

* Fix R style issues.

* Change string formatting code.

* Change docs to say R package not supported.

* Refactor check_interaction_constraints into separate function, add validation.

* Fix error messages.

* Add tests.

* Update docs.

* Fix tests, minor refactoring.

* Fix style issues.

* Fix R style issue.

* Remove old code.

* Fix existing test and add new one.

* Fix R lint error.

* [R-package] fix R CMD check NOTE about leftover files

* update number of allowed notes

* Add interaction constraints functionality.

* Minor fixes.

* Minor fixes.

* Change lambda to function.

* Fix gpu bug, remove extra blank lines.

* Fix gpu bug.

* Fix style issues.

* Try to fix segfault on MACOS.

* Fix bug.

* Fix bug.

* Fix bugs.

* Change parameter format for R.

* Fix R style issues.

* Change string formatting code.

* Change docs to say R package not supported.

* Remove R functionality, moving to separate PR.

* Keep track of branch features in tree object.

* Only track branch features when feature interactions are enabled.

* Fix lint error.

* Update docs and simplify tests.

* [R-package] replaced gendef.exe with R code to create R.def (fixes #3064)

* fix broken things

* trying to add R4.0 docs

* changed make

* fixing make paths

* update notes on environment variables

* fix linting

* fixes to CI

* fixing build_cmd and other stuff

* fix bad substitution

* fix Azure Linux builds

* I am bad at bash

* simplifying

* only testing R

* getting better logs

* mingw32

* docs

* toolchain

* using msys

* fix visual studio condition

* toolchain test

* full CI

* fix if-elses

* bump allowed NOTEs

* search for Rscript

* updates to docs

* use processx

* fix mismatched arguments

* move CI to GitHub Actions

* minor changes

* fix workflow file

* fix templating

* fix Azure DevOps

* debugging windows builds

* dont shQuote file name

* all GitHub Actions jobs

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* minor cleanup

* remove objdump printing

* make file.remove() invisible

* Apply suggestions from code review
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

* reduce duplicated paths in docs
Co-authored-by: Nikita Titov <nekit94-08@mail.ru>

This reverts commit 656d2676.

* Turn matrix to storage mode "double"

* added "test_Predictor.R" to R tests with check for integer storage mode during prediction

* Explicit integers in test_Preditor to avoid TravisCI failure

* properly aligning comment on storage.mode
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* split double assignment into two lines
Co-authored-by: James Lamb <jaylamb20@gmail.com>

* [R-package] fix issue where early stopping thinks higher MAPE is desirable (fixes #3099)

* fix linting

* only use main metrics

* fix tests

* [R-package] move R source files into R-package

* fix linting warning

* stuff

* [R-package] [docs] fix warnings in pkgdown sitte  building

* trying to get better Travis logs

* trying to get better Travis logs

* undo testing fix

* undo testing fix

* empty commit