[python-package] Allow to pass Arrow array as weights (#6164)

include/LightGBM/c_api.h

@@ -558,9 +558,9 @@ LIGHTGBM_C_EXPORT int LGBM_DatasetSetField(DatasetHandle handle,
 /*!
  * \brief Set vector to a content in info.
  * \note
- * - \a label convert input datatype into ``float32``.
+ * - \a label and \a weight convert input datatype into ``float32``.
  * \param handle Handle of dataset
- * \param field_name Field name, can be \a label
+ * \param field_name Field name, can be \a label, \a weight
  * \param n_chunks The number of Arrow arrays passed to this function
  * \param chunks Pointer to the list of Arrow arrays
  * \param schema Pointer to the schema of all Arrow arrays

include/LightGBM/dataset.h

@@ -113,6 +113,7 @@ class Metadata {
   void SetLabel(const ArrowChunkedArray& array);
 
   void SetWeights(const label_t* weights, data_size_t len);
+  void SetWeights(const ArrowChunkedArray& array);
 
   void SetQuery(const data_size_t* query, data_size_t len);
 
@@ -340,6 +341,9 @@ class Metadata {
   void SetLabelsFromIterator(It first, It last);
   /*! \brief Insert weights at the given index */
   void InsertWeights(const label_t* weights, data_size_t start_index, data_size_t len);
+  /*! \brief Set weights from pointers to the first element and the end of an iterator. */
+  template <typename It>
+  void SetWeightsFromIterator(It first, It last);
   /*! \brief Insert initial scores at the given index */
   void InsertInitScores(const double* init_scores, data_size_t start_index, data_size_t len, data_size_t source_size);
   /*! \brief Insert queries at the given index */

python-package/lightgbm/basic.py

@@ -19,7 +19,8 @@ import numpy as np
 import scipy.sparse
 
 from .compat import (PANDAS_INSTALLED, PYARROW_INSTALLED, arrow_cffi, arrow_is_floating, arrow_is_integer, concat,
-                     dt_DataTable, pa_Array, pa_ChunkedArray, pa_Table, pd_CategoricalDtype, pd_DataFrame, pd_Series)
+                     dt_DataTable, pa_Array, pa_ChunkedArray, pa_compute, pa_Table, pd_CategoricalDtype, pd_DataFrame,
+                     pd_Series)
 from .libpath import find_lib_path
 
 if TYPE_CHECKING:
@@ -115,7 +116,9 @@ _LGBM_WeightType = Union[
     List[float],
     List[int],
     np.ndarray,
-    pd_Series
+    pd_Series,
+    pa_Array,
+    pa_ChunkedArray,
 ]
 ZERO_THRESHOLD = 1e-35
 
@@ -1635,7 +1638,7 @@ class Dataset:
             Label of the data.
         reference : Dataset or None, optional (default=None)
             If this is Dataset for validation, training data should be used as reference.
-        weight : list, numpy 1-D array, pandas Series or None, optional (default=None)
+        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
             Weight for each instance. Weights should be non-negative.
         group : list, numpy 1-D array, pandas Series or None, optional (default=None)
             Group/query data.
@@ -2415,7 +2418,7 @@ class Dataset:
             If str or pathlib.Path, it represents the path to a text file (CSV, TSV, or LibSVM) or a LightGBM Dataset binary file.
         label : list, numpy 1-D array, pandas Series / one-column DataFrame, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
             Label of the data.
-        weight : list, numpy 1-D array, pandas Series or None, optional (default=None)
+        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
             Weight for each instance. Weights should be non-negative.
         group : list, numpy 1-D array, pandas Series or None, optional (default=None)
             Group/query data.
@@ -2830,7 +2833,7 @@ class Dataset:
 
         Parameters
         ----------
-        weight : list, numpy 1-D array, pandas Series or None
+        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None
             Weight to be set for each data point. Weights should be non-negative.
 
         Returns
@@ -2838,11 +2841,19 @@ class Dataset:
         self : Dataset
             Dataset with set weight.
         """
-        if weight is not None and np.all(weight == 1):
-            weight = None
+        # Check if the weight contains values other than one
+        if weight is not None:
+            if _is_pyarrow_array(weight):
+                if pa_compute.all(pa_compute.equal(weight, 1)).as_py():
+                    weight = None
+            elif np.all(weight == 1):
+                weight = None
         self.weight = weight
+
+        # Set field
         if self._handle is not None and weight is not None:
-            weight = _list_to_1d_numpy(weight, dtype=np.float32, name='weight')
+            if not _is_pyarrow_array(weight):
+                weight = _list_to_1d_numpy(weight, dtype=np.float32, name='weight')
             self.set_field('weight', weight)
             self.weight = self.get_field('weight')  # original values can be modified at cpp side
         return self
@@ -4414,7 +4425,7 @@ class Booster:
 
             .. versionadded:: 4.0.0
 
-        weight : list, numpy 1-D array, pandas Series or None, optional (default=None)
+        weight : list, numpy 1-D array, pandas Series, pyarrow Array, pyarrow ChunkedArray or None, optional (default=None)
             Weight for each ``data`` instance. Weights should be non-negative.
 
             .. versionadded:: 4.0.0

python-package/lightgbm/compat.py

@@ -197,6 +197,7 @@ except ImportError:
 
 """pyarrow"""
 try:
+    import pyarrow.compute as pa_compute
     from pyarrow import Array as pa_Array
     from pyarrow import ChunkedArray as pa_ChunkedArray
     from pyarrow import Table as pa_Table
@@ -236,6 +237,12 @@ except ImportError:
         def __init__(self, *args, **kwargs):
             pass
 
+    class pa_compute:  # type: ignore
+        """Dummy class for pyarrow.compute."""
+
+        all = None
+        equal = None
+
     arrow_is_integer = None
     arrow_is_floating = None
 

src/io/dataset.cpp

@@ -902,6 +902,8 @@ bool Dataset::SetFieldFromArrow(const char* field_name, const ArrowChunkedArray
   name = Common::Trim(name);
   if (name == std::string("label") || name == std::string("target")) {
     metadata_.SetLabel(ca);
+  } else if (name == std::string("weight") || name == std::string("weights")) {
+    metadata_.SetWeights(ca);
   } else {
     return false;
   }

src/io/metadata.cpp

@@ -450,33 +450,45 @@ void Metadata::InsertLabels(const label_t* labels, data_size_t start_index, data
   // CUDA is handled after all insertions are complete
 }
 
-void Metadata::SetWeights(const label_t* weights, data_size_t len) {
+template <typename It>
+void Metadata::SetWeightsFromIterator(It first, It last) {
   std::lock_guard<std::mutex> lock(mutex_);
-  // save to nullptr
-  if (weights == nullptr || len == 0) {
+  // Clear weights on empty input
+  if (last - first == 0) {
     weights_.clear();
     num_weights_ = 0;
     return;
   }
-  if (num_data_ != len) {
-    Log::Fatal("Length of weights is not same with #data");
+  if (num_data_ != last - first) {
+    Log::Fatal("Length of weights differs from the length of #data");
+  }
+  if (weights_.empty()) {
+    weights_.resize(num_data_);
   }
-  if (weights_.empty()) { weights_.resize(num_data_); }
   num_weights_ = num_data_;
 
   #pragma omp parallel for num_threads(OMP_NUM_THREADS()) schedule(static, 512) if (num_weights_ >= 1024)
   for (data_size_t i = 0; i < num_weights_; ++i) {
-    weights_[i] = Common::AvoidInf(weights[i]);
+    weights_[i] = Common::AvoidInf(first[i]);
   }
   CalculateQueryWeights();
   weight_load_from_file_ = false;
+
   #ifdef USE_CUDA
   if (cuda_metadata_ != nullptr) {
-    cuda_metadata_->SetWeights(weights_.data(), len);
+    cuda_metadata_->SetWeights(weights_.data(), weights_.size());
   }
   #endif  // USE_CUDA
 }
 
+void Metadata::SetWeights(const label_t* weights, data_size_t len) {
+  SetWeightsFromIterator(weights, weights + len);
+}
+
+void Metadata::SetWeights(const ArrowChunkedArray& array) {
+  SetWeightsFromIterator(array.begin<label_t>(), array.end<label_t>());
+}
+
 void Metadata::InsertWeights(const label_t* weights, data_size_t start_index, data_size_t len) {
   if (!weights) {
     Log::Fatal("Passed null weights");

tests/python_package_test/test_arrow.py

@@ -9,6 +9,8 @@ import pytest
 
 import lightgbm as lgb
 
+from .utils import np_assert_array_equal
+
 # ----------------------------------------------------------------------------------------------- #
 #                                            UTILITIES                                            #
 # ----------------------------------------------------------------------------------------------- #
@@ -67,10 +69,6 @@ def dummy_dataset_params() -> Dict[str, Any]:
     }
 
 
-def assert_arrays_equal(lhs: np.ndarray, rhs: np.ndarray):
-    assert lhs.dtype == rhs.dtype and np.array_equal(lhs, rhs)
-
-
 # ----------------------------------------------------------------------------------------------- #
 #                                            UNIT TESTS                                           #
 # ----------------------------------------------------------------------------------------------- #
@@ -103,6 +101,34 @@ def test_dataset_construct_fuzzy(
     assert filecmp.cmp(tmp_path / "arrow.txt", tmp_path / "pandas.txt")
 
 
+# -------------------------------------------- FIELDS ------------------------------------------- #
+
+
+def test_dataset_construct_fields_fuzzy():
+    arrow_table = generate_random_arrow_table(3, 1000, 42)
+    arrow_labels = generate_random_arrow_array(1000, 42)
+    arrow_weights = generate_random_arrow_array(1000, 42)
+
+    arrow_dataset = lgb.Dataset(arrow_table, label=arrow_labels, weight=arrow_weights)
+    arrow_dataset.construct()
+
+    pandas_dataset = lgb.Dataset(
+        arrow_table.to_pandas(), label=arrow_labels.to_numpy(), weight=arrow_weights.to_numpy()
+    )
+    pandas_dataset.construct()
+
+    # Check for equality
+    for field in ("label", "weight"):
+        np_assert_array_equal(
+            arrow_dataset.get_field(field), pandas_dataset.get_field(field), strict=True
+        )
+    np_assert_array_equal(arrow_dataset.get_label(), pandas_dataset.get_label(), strict=True)
+    np_assert_array_equal(arrow_dataset.get_weight(), pandas_dataset.get_weight(), strict=True)
+
+
+# -------------------------------------------- LABELS ------------------------------------------- #
+
+
 @pytest.mark.parametrize(
     ["array_type", "label_data"],
     [(pa.array, [0, 1, 0, 0, 1]), (pa.chunked_array, [[0], [1, 0, 0, 1]])],
@@ -129,17 +155,31 @@ def test_dataset_construct_labels(array_type: Any, label_data: Any, arrow_type:
     dataset.construct()
 
     expected = np.array([0, 1, 0, 0, 1], dtype=np.float32)
-    assert_arrays_equal(expected, dataset.get_label())
+    np_assert_array_equal(expected, dataset.get_label(), strict=True)
 
 
-def test_dataset_construct_labels_fuzzy():
-    arrow_table = generate_random_arrow_table(3, 1000, 42)
-    arrow_array = generate_random_arrow_array(1000, 42)
+# ------------------------------------------- WEIGHTS ------------------------------------------- #
 
-    arrow_dataset = lgb.Dataset(arrow_table, label=arrow_array)
-    arrow_dataset.construct()
 
-    pandas_dataset = lgb.Dataset(arrow_table.to_pandas(), label=arrow_array.to_numpy())
-    pandas_dataset.construct()
+def test_dataset_construct_weights_none():
+    data = generate_dummy_arrow_table()
+    weight = pa.array([1, 1, 1, 1, 1])
+    dataset = lgb.Dataset(data, weight=weight, params=dummy_dataset_params())
+    dataset.construct()
+    assert dataset.get_weight() is None
+    assert dataset.get_field("weight") is None
+
+
+@pytest.mark.parametrize(
+    ["array_type", "weight_data"],
+    [(pa.array, [3, 0.7, 1.5, 0.5, 0.1]), (pa.chunked_array, [[3], [0.7, 1.5, 0.5, 0.1]])],
+)
+@pytest.mark.parametrize("arrow_type", [pa.float32(), pa.float64()])
+def test_dataset_construct_weights(array_type: Any, weight_data: Any, arrow_type: Any):
+    data = generate_dummy_arrow_table()
+    weights = array_type(weight_data, type=arrow_type)
+    dataset = lgb.Dataset(data, weight=weights, params=dummy_dataset_params())
+    dataset.construct()
 
-    assert_arrays_equal(arrow_dataset.get_label(), pandas_dataset.get_label())
+    expected = np.array([3, 0.7, 1.5, 0.5, 0.1], dtype=np.float32)
+    np_assert_array_equal(expected, dataset.get_weight(), strict=True)