test.sh 13.8 KB
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#!/bin/bash

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set -e -E -o -u pipefail

# defaults
IN_UBUNTU_BASE_CONTAINER=${IN_UBUNTU_BASE_CONTAINER:-"false"}
METHOD=${METHOD:-""}
PRODUCES_ARTIFACTS=${PRODUCES_ARTIFACTS:-"false"}
SANITIZERS=${SANITIZERS:-""}
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ARCH=$(uname -m)

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if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "gcc" ]]; then
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    export CXX=g++-11
    export CC=gcc-11
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elif [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "clang" ]]; then
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    export CXX=clang++
    export CC=clang
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elif [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "clang-17" ]]; then
    export CXX=clang++-17
    export CC=clang-17
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fi

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if [[ $IN_UBUNTU_BASE_CONTAINER == "true" ]]; then
    export LANG="en_US.UTF-8"
    export LC_ALL="en_US.UTF-8"
fi

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if [[ "${TASK}" == "r-package" ]] || [[ "${TASK}" == "r-rchk" ]]; then
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    bash ${BUILD_DIRECTORY}/.ci/test_r_package.sh || exit 1
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    exit 0
fi

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if [[ "$TASK" == "cpp-tests" ]]; then
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    if [[ $METHOD == "with-sanitizers" ]]; then
        extra_cmake_opts="-DUSE_SANITIZER=ON"
        if [[ -n $SANITIZERS ]]; then
            extra_cmake_opts="$extra_cmake_opts -DENABLED_SANITIZERS=$SANITIZERS"
        fi
    else
        extra_cmake_opts=""
    fi
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    cmake -B build -S . -DBUILD_CPP_TEST=ON -DUSE_OPENMP=OFF -DUSE_DEBUG=ON $extra_cmake_opts
    cmake --build build --target testlightgbm -j4 || exit 1
    ./testlightgbm || exit 1
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    exit 0
fi

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CONDA_PYTHON_REQUIREMENT="python=$PYTHON_VERSION[build=*cpython]"

if [[ $TASK == "if-else" ]]; then
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    mamba create -q -y -n $CONDA_ENV ${CONDA_PYTHON_REQUIREMENT} numpy
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    source activate $CONDA_ENV
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    cmake -B build -S . || exit 1
    cmake --build build --target lightgbm -j4 || exit 1
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    cd $BUILD_DIRECTORY/tests/cpp_tests && ../../lightgbm config=train.conf convert_model_language=cpp convert_model=../../src/boosting/gbdt_prediction.cpp && ../../lightgbm config=predict.conf output_result=origin.pred || exit 1
    cd $BUILD_DIRECTORY/tests/cpp_tests && ../../lightgbm config=predict.conf output_result=ifelse.pred && python test.py || exit 1
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    exit 0
fi

if [[ $TASK == "swig" ]]; then
    if [[ $OS_NAME == "macos" ]]; then
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        cmake -B build -S . -DUSE_SWIG=ON -DAPPLE_OUTPUT_DYLIB=ON
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    else
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        cmake -B build -S . -DUSE_SWIG=ON
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    fi
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    cmake --build build -j4 || exit 1
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    if [[ $OS_NAME == "linux" ]] && [[ $COMPILER == "gcc" ]]; then
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        objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit 1
        objdump -T $BUILD_DIRECTORY/lib_lightgbm_swig.so >> $BUILD_DIRECTORY/objdump.log || exit 1
        python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit 1
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    fi
    if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
        cp $BUILD_DIRECTORY/build/lightgbmlib.jar $BUILD_ARTIFACTSTAGINGDIRECTORY/lightgbmlib_$OS_NAME.jar
    fi
    exit 0
fi

if [[ $TASK == "lint" ]]; then
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    cd ${BUILD_DIRECTORY}
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    mamba create -q -y -n $CONDA_ENV \
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        ${CONDA_PYTHON_REQUIREMENT} \
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        'cmakelint>=1.4.2' \
        'cpplint>=1.6.0' \
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        'matplotlib>=3.8.3' \
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        'mypy>=1.8.0' \
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        'pre-commit>=3.6.0' \
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        'pyarrow>=14.0' \
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        'r-lintr>=3.1'
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    source activate $CONDA_ENV
    echo "Linting Python code"
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    bash ${BUILD_DIRECTORY}/.ci/lint-python.sh || exit 1
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    echo "Linting R code"
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    Rscript ${BUILD_DIRECTORY}/.ci/lint_r_code.R ${BUILD_DIRECTORY} || exit 1
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    echo "Linting C++ code"
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    bash ${BUILD_DIRECTORY}/.ci/lint-cpp.sh || exit 1
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    exit 0
fi

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if [[ $TASK == "check-docs" ]] || [[ $TASK == "check-links" ]]; then
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    cd $BUILD_DIRECTORY/docs
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    mamba env create \
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        -n $CONDA_ENV \
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        --file ./env.yml || exit 1
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    mamba install \
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        -q \
        -y \
        -n $CONDA_ENV \
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            'doxygen>=1.10.0' \
            'rstcheck>=6.2.0' || exit 1
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    source activate $CONDA_ENV
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    # check reStructuredText formatting
    cd $BUILD_DIRECTORY/python-package
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    rstcheck --report-level warning $(find . -type f -name "*.rst") || exit 1
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    cd $BUILD_DIRECTORY/docs
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    rstcheck --report-level warning --ignore-directives=autoclass,autofunction,autosummary,doxygenfile $(find . -type f -name "*.rst") || exit 1
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    # build docs
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    make html || exit 1
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    if [[ $TASK == "check-links" ]]; then
        # check docs for broken links
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        pip install --user linkchecker
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        linkchecker --config=.linkcheckerrc ./_build/html/*.html || exit 1
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        exit 0
    fi
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    # check the consistency of parameters' descriptions and other stuff
    cp $BUILD_DIRECTORY/docs/Parameters.rst $BUILD_DIRECTORY/docs/Parameters-backup.rst
    cp $BUILD_DIRECTORY/src/io/config_auto.cpp $BUILD_DIRECTORY/src/io/config_auto-backup.cpp
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    python $BUILD_DIRECTORY/helpers/parameter_generator.py || exit 1
    diff $BUILD_DIRECTORY/docs/Parameters-backup.rst $BUILD_DIRECTORY/docs/Parameters.rst || exit 1
    diff $BUILD_DIRECTORY/src/io/config_auto-backup.cpp $BUILD_DIRECTORY/src/io/config_auto.cpp || exit 1
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    exit 0
fi
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# older versions of Dask are incompatible with pandas>=2.0, but not all conda packages' metadata accurately reflects that
#
# ref: https://github.com/microsoft/LightGBM/issues/6030
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CONSTRAINED_DEPENDENCIES="'dask>=2023.5.0' 'distributed>=2023.5.0' 'pandas>=2.0' python-graphviz"
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if [[ $PYTHON_VERSION == "3.7" ]]; then
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    CONSTRAINED_DEPENDENCIES="'dask' 'distributed' 'python-graphviz<0.20.2' 'pandas<2.0'"
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fi

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# including python=version[build=*cpython] to ensure that conda doesn't fall back to pypy
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mamba create -q -y -n $CONDA_ENV \
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    ${CONSTRAINED_DEPENDENCIES} \
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    cffi \
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    cloudpickle \
    joblib \
    matplotlib \
    numpy \
    psutil \
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    pyarrow \
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    pytest \
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    ${CONDA_PYTHON_REQUIREMENT} \
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    scikit-learn \
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    scipy || exit 1
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source activate $CONDA_ENV

cd $BUILD_DIRECTORY

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if [[ $OS_NAME == "macos" ]] && [[ $COMPILER == "clang" ]]; then
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    # fix "OMP: Error #15: Initializing libiomp5.dylib, but found libomp.dylib already initialized." (OpenMP library conflict due to conda's MKL)
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    for LIBOMP_ALIAS in libgomp.dylib libiomp5.dylib libomp.dylib; do sudo ln -sf "$(brew --cellar libomp)"/*/lib/libomp.dylib $CONDA_PREFIX/lib/$LIBOMP_ALIAS || exit 1; done
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fi

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if [[ $TASK == "sdist" ]]; then
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    cd $BUILD_DIRECTORY && sh ./build-python.sh sdist || exit 1
    sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
    pip install --user $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER.tar.gz -v || exit 1
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    if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
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        cp $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER.tar.gz $BUILD_ARTIFACTSTAGINGDIRECTORY || exit 1
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    fi
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    pytest $BUILD_DIRECTORY/tests/python_package_test || exit 1
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    exit 0
elif [[ $TASK == "bdist" ]]; then
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    if [[ $OS_NAME == "macos" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh bdist_wheel || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
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        mv \
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            ./dist/*.whl \
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            ./dist/tmp.whl || exit 1
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        if [[ $ARCH == "x86_64" ]]; then
            PLATFORM="macosx_10_15_x86_64.macosx_11_6_x86_64.macosx_12_5_x86_64"
        else
            echo "ERROR: macos wheels not supported yet on architecture '${ARCH}'"
            exit 1
        fi
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        mv \
            ./dist/tmp.whl \
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            dist/lightgbm-$LGB_VER-py3-none-$PLATFORM.whl || exit 1
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        if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
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            cp dist/lightgbm-$LGB_VER-py3-none-macosx*.whl $BUILD_ARTIFACTSTAGINGDIRECTORY || exit 1
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        fi
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    else
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        if [[ $ARCH == "x86_64" ]]; then
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            PLATFORM="manylinux_2_28_x86_64"
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        else
            PLATFORM="manylinux2014_$ARCH"
        fi
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        cd $BUILD_DIRECTORY && sh ./build-python.sh bdist_wheel --integrated-opencl || exit 1
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        mv \
            ./dist/*.whl \
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            ./dist/tmp.whl || exit 1
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        mv \
            ./dist/tmp.whl \
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            ./dist/lightgbm-$LGB_VER-py3-none-$PLATFORM.whl || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
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        if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
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            cp dist/lightgbm-$LGB_VER-py3-none-$PLATFORM.whl $BUILD_ARTIFACTSTAGINGDIRECTORY || exit 1
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        fi
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        # Make sure we can do both CPU and GPU; see tests/python_package_test/test_dual.py
        export LIGHTGBM_TEST_DUAL_CPU_GPU=1
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    fi
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    pip install --user $BUILD_DIRECTORY/dist/*.whl || exit 1
    pytest $BUILD_DIRECTORY/tests || exit 1
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    exit 0
fi

if [[ $TASK == "gpu" ]]; then
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    sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "gpu";/' $BUILD_DIRECTORY/include/LightGBM/config.h
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    grep -q 'std::string device_type = "gpu"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit 1  # make sure that changes were really done
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    if [[ $METHOD == "pip" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh sdist || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
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        pip install \
            --user \
            -v \
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            --config-settings=cmake.define.USE_GPU=ON \
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            $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER.tar.gz \
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        || exit 1
        pytest $BUILD_DIRECTORY/tests/python_package_test || exit 1
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        exit 0
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    elif [[ $METHOD == "wheel" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh bdist_wheel --gpu || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
        pip install --user $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER*.whl -v || exit 1
        pytest $BUILD_DIRECTORY/tests || exit 1
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        exit 0
    elif [[ $METHOD == "source" ]]; then
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        cmake -B build -S . -DUSE_GPU=ON
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    fi
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elif [[ $TASK == "cuda" ]]; then
    sed -i'.bak' 's/std::string device_type = "cpu";/std::string device_type = "cuda";/' $BUILD_DIRECTORY/include/LightGBM/config.h
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    grep -q 'std::string device_type = "cuda"' $BUILD_DIRECTORY/include/LightGBM/config.h || exit 1  # make sure that changes were really done
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    # by default ``gpu_use_dp=false`` for efficiency. change to ``true`` here for exact results in ci tests
    sed -i'.bak' 's/gpu_use_dp = false;/gpu_use_dp = true;/' $BUILD_DIRECTORY/include/LightGBM/config.h
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    grep -q 'gpu_use_dp = true' $BUILD_DIRECTORY/include/LightGBM/config.h || exit 1  # make sure that changes were really done
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    if [[ $METHOD == "pip" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh sdist || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
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        pip install \
            --user \
            -v \
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            --config-settings=cmake.define.USE_CUDA=ON \
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            $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER.tar.gz \
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        || exit 1
        pytest $BUILD_DIRECTORY/tests/python_package_test || exit 1
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        exit 0
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    elif [[ $METHOD == "wheel" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh bdist_wheel --cuda || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
        pip install --user $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER*.whl -v || exit 1
        pytest $BUILD_DIRECTORY/tests || exit 1
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        exit 0
    elif [[ $METHOD == "source" ]]; then
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        cmake -B build -S . -DUSE_CUDA=ON
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    fi
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elif [[ $TASK == "mpi" ]]; then
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    if [[ $METHOD == "pip" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh sdist || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
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        pip install \
            --user \
            -v \
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            --config-settings=cmake.define.USE_MPI=ON \
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            $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER.tar.gz \
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        || exit 1
        pytest $BUILD_DIRECTORY/tests/python_package_test || exit 1
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        exit 0
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    elif [[ $METHOD == "wheel" ]]; then
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        cd $BUILD_DIRECTORY && sh ./build-python.sh bdist_wheel --mpi || exit 1
        sh $BUILD_DIRECTORY/.ci/check_python_dists.sh $BUILD_DIRECTORY/dist || exit 1
        pip install --user $BUILD_DIRECTORY/dist/lightgbm-$LGB_VER*.whl -v || exit 1
        pytest $BUILD_DIRECTORY/tests || exit 1
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        exit 0
    elif [[ $METHOD == "source" ]]; then
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        cmake -B build -S . -DUSE_MPI=ON -DUSE_DEBUG=ON
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    fi
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else
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    cmake -B build -S .
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fi

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cmake --build build --target _lightgbm -j4 || exit 1
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cd $BUILD_DIRECTORY && sh ./build-python.sh install --precompile --user || exit 1
pytest $BUILD_DIRECTORY/tests || exit 1
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if [[ $TASK == "regular" ]]; then
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    if [[ $PRODUCES_ARTIFACTS == "true" ]]; then
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        if [[ $OS_NAME == "macos" ]]; then
            cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.dylib
        else
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            if [[ $COMPILER == "gcc" ]]; then
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                objdump -T $BUILD_DIRECTORY/lib_lightgbm.so > $BUILD_DIRECTORY/objdump.log || exit 1
                python $BUILD_DIRECTORY/helpers/check_dynamic_dependencies.py $BUILD_DIRECTORY/objdump.log || exit 1
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            fi
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            cp $BUILD_DIRECTORY/lib_lightgbm.so $BUILD_ARTIFACTSTAGINGDIRECTORY/lib_lightgbm.so
        fi
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    fi
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    cd $BUILD_DIRECTORY/examples/python-guide
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    sed -i'.bak' '/import lightgbm as lgb/a\
import matplotlib\
matplotlib.use\(\"Agg\"\)\
' plot_example.py  # prevent interactive window mode
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    sed -i'.bak' 's/graph.render(view=True)/graph.render(view=False)/' plot_example.py
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    # requirements for examples
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    mamba install -q -y -n $CONDA_ENV \
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        h5py \
        ipywidgets \
        notebook
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    for f in *.py **/*.py; do python $f || exit 1; done  # run all examples
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    cd $BUILD_DIRECTORY/examples/python-guide/notebooks
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    sed -i'.bak' 's/INTERACTIVE = False/assert False, \\"Interactive mode disabled\\"/' interactive_plot_example.ipynb
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    jupyter nbconvert --ExecutePreprocessor.timeout=180 --to notebook --execute --inplace *.ipynb || exit 1  # run all notebooks
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    # importing the library should succeed even if all optional dependencies are not present
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    conda uninstall -n $CONDA_ENV --force --yes \
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        cffi \
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        dask \
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        distributed \
        joblib \
        matplotlib \
        psutil \
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        pyarrow \
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        python-graphviz \
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        scikit-learn || exit 1
    python -c "import lightgbm" || exit 1
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fi