meta.yaml 1.23 KB
Newer Older
wangsen's avatar
wangsen committed
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
{% set name = "higashi" %}
{% set version = "0.1.0a0" %}

package:
  name: "{{ name|lower }}"
  version: "{{ version }}"

source:
#  url: "https://test.pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
  git-url:
build:
  number: 0
  script: "{{ PYTHON }} -m pip install . -vv"

requirements:
  host:
    - bokeh >=2.1.1
    - cooler >=0.8
    - cython >=0.29.24
    - fbpca
    - h5py
    - numpy >=1.21.2
    - pandas >=1.3.4
    - pillow
    - pip
    - python >=3.9
    - pytorch >=1.8
    - scikit-learn >=0.23.2
    - scipy >=1.7.3
    - seaborn >=0.11.2
    - tqdm
    - umap-learn >=0.5
  run:
    - bokeh >=2.1.1
    - cooler >=0.8
    - cython >=0.29.24
    - fbpca
    - h5py
    - numpy >=1.21.2
    - pandas >=1.3.4
    - pillow
    - python >=3.9
    - pytorch >=1.8
    - scikit-learn >=0.23.2
    - scipy >=1.7.3
    - seaborn >=0.11.2
    - tqdm
    - umap-learn >=0.5

test:
  imports:
    - higashi
    - higashi.Higashi_analysis
    - higashi.Higashi_backend

about:
  home: "https://github.com/ma-compbio/Higashi"
  license: MIT
  license_family: MIT
  license_file:
  summary: "Higashi: Multiscale and integrative scHi-C analysis"
  doc_url:
  dev_url:

extra:
  recipe-maintainers:
    - your-github-id-here