Commit de076fe9 authored by wangsen's avatar wangsen
Browse files

add requirment.txt

parent 135c3aaa
......@@ -35,6 +35,7 @@ cd Geneformer
conda create -n geneformer python=3.10
conda activate geneformer
pip install torch #dcu版本的torch
pip install -r requirements.txt -i https://pypi.tuna.tsinghua.edu.cn/simple
```
......
anndata>=0.9
datasets>=2.12
hyperopt>=0.2
loompy>=3.0
matplotlib>=3.7
numpy>=1.23
packaging>=23.0
pandas>=2.0
pyarrow>=12.0
pytz>=2023.0
ray>=2.6
scanpy>=1.9
scikit_learn>=1.2
scipy>=1.10
seaborn>=0.12
setuptools>=65.6
statsmodels>=0.14
tdigest>=0.5.2
#torch>=2.0.1
tqdm>=4.65
transformers>=4.28
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