update readme.md

README.md

@@ -111,11 +111,8 @@ python install -e .
 
 单卡运行 gene classification
 ```
-
-
 cd geneformer/
 python  train.py
-
 ```
 详情可以参考 Geneformer/examples/cell_classification.ipynb
 

train_cell.py

@@ -139,7 +139,7 @@ for organ in organ_list:
     logging_steps = round(len(organ_trainset)/geneformer_batch_size/10)
 
     # reload pretrained model
-    model = BertForSequenceClassification.from_pretrained("//Geneformer",
+    model = BertForSequenceClassification.from_pretrained("/path/to/Geneformer",
                                                       num_labels=len(organ_label_dict.keys()),
                                                       output_attentions = False,
                                                       output_hidden_states = False).to("cuda")