Commit fbc17cd8 authored by adaZ-9's avatar adaZ-9
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Merge branch 'main' of github.com:gyjames/CIRIdeep

parents 68c43cca 57c73e96
...@@ -3,11 +3,12 @@ ...@@ -3,11 +3,12 @@
- An adapted version of CIRI-deep, CIRI-deepA, was trained for poly(A) selected RNA-seq data. - An adapted version of CIRI-deep, CIRI-deepA, was trained for poly(A) selected RNA-seq data.
# Installation # Installation
The CIRI-deep model was constructed based on Keras. The `requirements.txt` was provided and the dependencies can be installed as the follow: The CIRI-deep model was constructed based on Keras. The `environment.yaml` was provided and the dependencies can be installed as the follow:
``` ```
git clone https://github.com/gyjames/CIRIdeep.git git clone https://github.com/gyjames/CIRIdeep.git
cd CIRIdeep cd CIRIdeep
conda env create --name CIRIdeep --file ./requirements.txt conda env create -n CIRIdeep -f ./environment.yaml
conda activate CIRIdeep
``` ```
# Usage # Usage
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