CIRIdeep is a deep-learning model used to predict differentially spliced circRNAs between two biological samples using totalRNA sequencing data. An adapted version of CIRIdeep, CIRIdeepA, was trained for poly(A) selected RNA-seq data.
- CIRIdeep is a deep-learning model used to predict differentially spliced circRNAs between two biological samples using totalRNA sequencing data.
- An adapted version of CIRIdeep, CIRIdeepA, was trained for poly(A) selected RNA-seq data.
# Usage
The main program `CIRIdeep.py` can be used to predict differentially spliced circRNAs with CIRIdeep or CIRIdeep(A) or train your own model.
