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ModelZoo
CIRI-deep_tensorflow
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2f2b4d57
"docs/source/guide_ko/graph-basic.rst" did not exist on "d2ef24335c3483b242b328b0db26d3084ac40f2f"
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2f2b4d57
authored
Oct 15, 2024
by
wangsen
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README.md
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2f2b4d57
...
@@ -24,8 +24,8 @@ CIRI deep通过深度神经网络对circRNA的顺式特征和样本对(总RNA
...
@@ -24,8 +24,8 @@ CIRI deep通过深度神经网络对circRNA的顺式特征和样本对(总RNA
## Docker(方法一)
## Docker(方法一)
```
```
docker pull image.sourcefind.cn:5000/dcu/admin/base/
pytorch:2.1.0-ubuntu20.04-dtk24.04.1-py3.10
docker pull
image.sourcefind.cn:5000/dcu/admin/base/
custom:cirideep
docker run -dit --shm-size 80g --network=host --name=CIRI --privileged --device=/dev/kfd --device=/dev/dri --group-add video --cap-add=SYS_PTRACE --security-opt seccomp=unconfined -u root -v /opt/hyhal/:/opt/hyhal/:ro image.sourcefind.cn:5000/dcu/admin/base/
pytorch:2.1.0-ubuntu20.04-dtk24.04.1-py3.10
/bin/bash
docker run -dit --shm-size 80g --network=host --name=CIRI --privileged --device=/dev/kfd --device=/dev/dri --group-add video --cap-add=SYS_PTRACE --security-opt seccomp=unconfined -u root -v /opt/hyhal/:/opt/hyhal/:ro image.sourcefind.cn:5000/dcu/admin/base/
custom:cirideep
/bin/bash
docker exec -it CIRI /bin/bash
docker exec -it CIRI /bin/bash
```
```
...
@@ -46,7 +46,7 @@ docker run -dit --shm-size 80g --network=host --name=geneformer --privileged --d
...
@@ -46,7 +46,7 @@ docker run -dit --shm-size 80g --network=host --name=geneformer --privileged --d
docker exec -it CIRI /bin/bash
docker exec -it CIRI /bin/bash
```
```
## anaconda
## anaconda
(方法三)
1.
创建conda虚拟环境:
1.
创建conda虚拟环境:
...
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dockerfile
View file @
2f2b4d57
FROM
image.sourcefind.cn:5000/dcu/admin/base/
pytorch:2.1.0-ubuntu20.04-dtk24.04.1-py3.10
FROM
image.sourcefind.cn:5000/dcu/admin/base/
custom:cirideep
RUN
source
/opt/dtk-24.04.1/env.sh
RUN
source
/opt/dtk-24.04.1/env.sh
RUN
cp
/usr/share/zoneinfo/Asia/Shanghai /etc/localtime
&&
echo
'Asia/Shanghai'
>
/etc/timezone
RUN
cp
/usr/share/zoneinfo/Asia/Shanghai /etc/localtime
&&
echo
'Asia/Shanghai'
>
/etc/timezone
ENV
LANG C.UTF-8
ENV
LANG C.UTF-8
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