- 21 Feb, 2022 1 commit
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Tim Green authored
PiperOrigin-RevId: 430053169 Change-Id: Ia7461bc23d6e0c94f5bef8c1ded1c8306193e67e
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- 18 Feb, 2022 2 commits
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Rich Evans authored
PiperOrigin-RevId: 429521382 Change-Id: Ib9bfce50834bb129af0dbd3508cd0b92856a9bb1
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Rich Evans authored
PiperOrigin-RevId: 429520386 Change-Id: Ic1ba2b31e25a0511fefe5d0d462fc5a218641a56
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- 17 Feb, 2022 1 commit
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Rich Evans authored
PiperOrigin-RevId: 429318717 Change-Id: Ib07df7ecd4bc52feea80a66c585ce51f332ac7a1
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- 16 Feb, 2022 1 commit
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Michael Figurnov authored
Previously, setting num_recycle=0 in a pretrained recycling model skipped creating some Linears and LayerNorms. This meant that the the offsets of these modules were not applied leading to a degraded performance in that case. PiperOrigin-RevId: 429075328 Change-Id: I9257f859521799f45e2deef3803c249311051225
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- 14 Feb, 2022 1 commit
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Tom Hennigan authored
Haiku plans to make split_rng a required argument to hk.vmap in an upcoming release. This change updates AlphaFold to preserve the current behaviour. We also handle the case where users are using a release of Haiku without the split_rng option, for these users split_rng=False is implied. PiperOrigin-RevId: 428429472 Change-Id: I3292396eb330ffabf2f36f5364aa0ae1bc74cf71
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- 08 Feb, 2022 1 commit
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Augustin Zidek authored
PiperOrigin-RevId: 427128482 Change-Id: I31134f7b0675260c79c799f14626140d74d745d4
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- 31 Jan, 2022 1 commit
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Augustin Zidek authored
PiperOrigin-RevId: 425323152 Change-Id: Id1aa81316c95617e970ce014f4a331d1ed49ec02
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- 28 Jan, 2022 1 commit
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Augustin Zidek authored
PiperOrigin-RevId: 424887480 Change-Id: I4ea7a2aba785d037f49cf22c503ebebe3303e468
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- 27 Jan, 2022 1 commit
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Augustin Zidek authored
PiperOrigin-RevId: 424591903
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- 19 Jan, 2022 2 commits
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Tim Green authored
Don't ignore the README.md.
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Augustin-Zidek authored
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- 05 Nov, 2021 2 commits
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Augustin Zidek authored
* Remove a confusing example that folds multiple complexes at once. * Add examples on how to create the multimer input FASTA files. * Add a note about the `model_preset` flag to the API changes. PiperOrigin-RevId: 407774039 Change-Id: I80277c47febc977ba3956d0615944e62b0d5c3fc
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Rich Evans authored
PiperOrigin-RevId: 407773747 Change-Id: I8635dd77ecf366f4f5a362993b964adffc3ff186
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- 04 Nov, 2021 1 commit
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Andrew Cowie authored
PiperOrigin-RevId: 407584472 Change-Id: Icfa755722ddabff71d27f4a3d07f9e88a409c3a6
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- 02 Nov, 2021 1 commit
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Augustin-Zidek authored
PiperOrigin-RevId: 407076987
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- 10 Sep, 2021 2 commits
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Augustin Zidek authored
Addresses https://github.com/deepmind/alphafold/issues/168. PiperOrigin-RevId: 395907797 Change-Id: I28c7e951211c9cf6bd5e35d8dfaf57f22e843ed0
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Augustin Zidek authored
Fixes https://github.com/deepmind/alphafold/issues/163. PiperOrigin-RevId: 395878875 Change-Id: I99a9defa95547582bbfd9fec3ae821386274d77f
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- 31 Aug, 2021 2 commits
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Jake VanderPlas authored
Why? This will soon be a requirement in JAX; see https://github.com/google/jax/issues/7737 PiperOrigin-RevId: 394105499 Change-Id: I6f76e3f47b7906616c1f988be58d29c828414060
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Michael Figurnov authored
PiperOrigin-RevId: 393964942 Change-Id: I9c45191f726b40b66cea1cdd9f2efa2d4082b084
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- 25 Aug, 2021 1 commit
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DeepMind authored
PiperOrigin-RevId: 392861510 Change-Id: I266255479210e5c9b6cbc02977f4024d40c5b94d
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- 13 Aug, 2021 3 commits
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Augustin Zidek authored
PiperOrigin-RevId: 390608262 Change-Id: I4c49aeb2aea362d578b7de43d16bf2e418fdd96d
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Augustin Zidek authored
PiperOrigin-RevId: 390566020 Change-Id: I3fafbe8246d0a5ad018f0398b39bf7dacee00468
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Augustin Zidek authored
PiperOrigin-RevId: 390553964 Change-Id: Ia5bc6e12ab3f1a7827b7d914c93f6990a1139780
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- 12 Aug, 2021 1 commit
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Augustin Zidek authored
PiperOrigin-RevId: 390355132 Change-Id: I920a80db674541af41ee83ef3d5bd5255c782ee9
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- 02 Aug, 2021 2 commits
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Augustin Zidek authored
PiperOrigin-RevId: 388195957 Change-Id: Id22b96c964a82e3450a5f457d8facd1e85b1e86a
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Augustin Zidek authored
PiperOrigin-RevId: 388172326 Change-Id: I11d9e498c226cd752947feb51b7d1eb343b4d7ab
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- 30 Jul, 2021 2 commits
- 29 Jul, 2021 3 commits
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Alex Bridgland authored
PiperOrigin-RevId: 387577557 Change-Id: I37c0a748dd3d8d3d179aae579c5504d7ec92ecaf
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Tim Green authored
PiperOrigin-RevId: 387576219 Change-Id: Ic735f068df2a3e9f53bed836f172c08f79ac231c
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Augustin Zidek authored
PiperOrigin-RevId: 387546070 Change-Id: I24cce3825801dde09be70970cf48141679762a2a
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- 27 Jul, 2021 3 commits
- 26 Jul, 2021 2 commits
- 23 Jul, 2021 1 commit
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DeepMind authored
PiperOrigin-RevId: 386417647 Change-Id: I6f2121f3c02d3ef97467f46c5e651ca1b0f2eab2
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- 22 Jul, 2021 1 commit
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Saran Tunyasuvunakool authored
PiperOrigin-RevId: 386228948
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- 16 Jul, 2021 1 commit
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Tim Green authored
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