Blame · requirements.txt · 2eb6c0cc58b49c53810b02b3f9f78e2ffa370f9d · ModelZoo / alphafold2_jax · GitLab

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Initial release of AlphaFold. Augustin-Zidek committed Jul 15, 2021	1 2 3 4 5 6 7 8 9 10	`absl-py==0.13.0 biopython==1.79 chex==0.0.7 dm-haiku==0.0.4 dm-tree==0.1.6 docker==5.0.0 immutabledict==2.0.0 jax==0.2.14 ml-collections==0.1.0 numpy==1.19.5`
Add code for AlphaFold-Multimer. Augustin-Zidek committed Nov 02, 2021	11	`pandas==1.3.4`
Pin protobuf version to 3.20.1. Augustin Zidek committed Jun 13, 2022	12	`protobuf==3.20.1`
Initial release of AlphaFold. Augustin-Zidek committed Jul 15, 2021	13	`scipy==1.7.0`
Switch to Tensorflow CPU-only. GPU not needed for data pipeline. Tim Green committed Jul 29, 2021	14	`tensorflow-cpu==2.5.0`